DK960688 |
Clone id |
TST39A01NGRL0008_B11 |
Library |
TST39 |
Length |
699 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_B11. 5' end sequence. |
Accession |
DK960688 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TTGTGCGGCTGTATCAGATCCCGTGAAACCTGAAGCTAAGGCGGTAGTAGCTATATTAAG CTCAATGGGGGTGCAAAGCTTAATGGTTACTGGAGATAATTGGGGAACTGCAAACGCCAT AGCAAGGGAGGTGGGCATTGAGAAGGTTTTTGCCGAAACCCGACCACAAGGGAAAGCTGA TATAGTGAAAGAGCTACAGCAGTCAACAGGGAAAACAATAGCAATGGTCGGTGATGGGAT CAATGATTCACCTGCACTTGTAGCTGCTGATCTAGGCATGGCGATTGGTGCAGGGACAGA CATAGCGATTGAGGCTGCTGATATTGTTTTGATGAGAAACAATCTGGAGGATGTTGTCAC TGCAATACACTTGTCAAAGAAAACTTTTCGACGCATACGACTCAATTATGTCTGGGCGCT TGGTTACAATATATTGGGGATTCCTATAGCTGCTGGAGTGCTCTTCCCTTTCACAGGTTT TCGTTTGCCGCCATGGGTTGCTGGTGCGGCAATGGCTGCATCGTCTGTCAGCGTTGTCTT GTCATCCCTTTTCCTGAAAAATTACAAAAAGCCTTCCAAGCTGACAGCATCCAAGTTTCA ACTGGACCAAAGTTGAGTACATGCTCTGTAAAATTCAGATTTAGAGATGCTGAGACGAAG CCNAAGCTATGCTATGGGCATTGTGTTATGAGCTGCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SH30 |
Definition |
sp|Q9SH30|AHM7_ARATH Putative copper-transporting ATPase 3 OS=Arabidopsis thaliana |
Align length |
192 |
Score (bit) |
263.0 |
E-value |
7.0e-70 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B5AXL4 |
Definition |
tr|B5AXL4|B5AXL4_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana |
Align length |
192 |
Score (bit) |
263.0 |
E-value |
8.0e-69 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960688|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_B11, 5' (699 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B5AXL4|B5AXL4_ARATH Heavy metal P-type ATPase OS=Arabidopsis ... 263 8e-69 tr|B5AXJ3|B5AXJ3_ARATH Heavy metal P-type ATPase OS=Arabidopsis ... 263 8e-69 tr|B5AXJ0|B5AXJ0_ARATH Heavy metal P-type ATPase OS=Arabidopsis ... 263 8e-69 tr|B5AXI8|B5AXI8_ARATH Heavy metal P-type ATPase OS=Arabidopsis ... 263 8e-69 tr|B5AXI7|B5AXI7_ARATH Heavy metal P-type ATPase OS=Arabidopsis ... 263 8e-69 tr|B5AXI6|B5AXI6_ARATH Heavy metal P-type ATPase OS=Arabidopsis ... 263 8e-69 tr|A7QIV2|A7QIV2_VITVI Chromosome chr2 scaffold_105, whole genom... 262 1e-68 tr|A7QIV0|A7QIV0_VITVI Chromosome chr2 scaffold_105, whole genom... 262 2e-68 tr|B5AXM3|B5AXM3_ARATH Heavy metal P-type ATPase OS=Arabidopsis ... 261 4e-68 tr|Q6JAG3|Q6JAG3_SORBI Putative copper-exporting ATPase OS=Sorgh... 258 2e-67 tr|A7QIU6|A7QIU6_VITVI Chromosome chr2 scaffold_105, whole genom... 258 3e-67 tr|A5C5M4|A5C5M4_VITVI Putative uncharacterized protein OS=Vitis... 258 3e-67 tr|Q6JAH7|Q6JAH7_MAIZE Putative ATP dependent copper transporter... 256 1e-66 tr|Q6JAG2|Q6JAG2_SORBI Putative copper-exporting ATPase OS=Sorgh... 256 1e-66 tr|B4G0T0|B4G0T0_MAIZE Putative uncharacterized protein OS=Zea m... 256 1e-66 tr|A3AWA4|A3AWA4_ORYSJ Putative uncharacterized protein OS=Oryza... 254 4e-66 tr|A2XWB0|A2XWB0_ORYSI Putative uncharacterized protein OS=Oryza... 254 4e-66 tr|Q0JB51|Q0JB51_ORYSJ Os04g0556000 protein OS=Oryza sativa subs... 253 8e-66 tr|Q6H7M3|Q6H7M3_ORYSJ Os02g0196600 protein OS=Oryza sativa subs... 249 1e-64 tr|B8ADR7|B8ADR7_ORYSI Putative uncharacterized protein OS=Oryza... 249 1e-64 tr|A7NZT0|A7NZT0_VITVI Chromosome chr6 scaffold_3, whole genome ... 243 7e-63 tr|A5BWI8|A5BWI8_VITVI Putative uncharacterized protein OS=Vitis... 243 7e-63 tr|Q6H6Z1|Q6H6Z1_ORYSJ Putative copper-exporting ATPase OS=Oryza... 228 2e-58 tr|Q0E3J1|Q0E3J1_ORYSJ Os02g0172600 protein OS=Oryza sativa subs... 228 2e-58 tr|B8AIJ3|B8AIJ3_ORYSI Putative uncharacterized protein OS=Oryza... 228 2e-58 tr|Q94KD6|Q94KD6_ARATH AT5g44790/K23L20_14 OS=Arabidopsis thalia... 228 3e-58 tr|Q941L1|Q941L1_BRANA Copper-transporting P-type ATPase OS=Bras... 226 1e-57 tr|B8LQ20|B8LQ20_PICSI Putative uncharacterized protein OS=Picea... 226 1e-57 tr|A9T8Q3|A9T8Q3_PHYPA Predicted protein OS=Physcomitrella paten... 225 2e-57 tr|A9SME3|A9SME3_PHYPA Predicted protein OS=Physcomitrella paten... 224 4e-57
>tr|B5AXL4|B5AXL4_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana GN=HMA5 PE=4 SV=1 Length = 995
Score = 263 bits (672), Expect = 8e-69 Identities = 132/192 (68%), Positives = 155/192 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A+ ++IL SM ++S+MVTGDNWGTAN+IAREVGI+ V AE +P+ KA+ V Sbjct: 792 SVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDSVIAEAKPEQKAEKV 851
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ + G +AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 852 KELQ-AAGHVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 910
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNYVWALGYN++GIPIAAGVLFP T FRLPPW Sbjct: 911 DLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCS 970
Query: 548 LFLKNYKKPSKL 583 L LKNYK+P KL Sbjct: 971 LLLKNYKRPKKL 982
>tr|B5AXJ3|B5AXJ3_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana GN=HMA5 PE=4 SV=1 Length = 995
Score = 263 bits (672), Expect = 8e-69 Identities = 132/192 (68%), Positives = 155/192 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A+ ++IL SM ++S+MVTGDNWGTAN+IAREVGI+ V AE +P+ KA+ V Sbjct: 792 SVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDSVIAEAKPEQKAEKV 851
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ + G +AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 852 KELQ-AAGHVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 910
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNYVWALGYN++GIPIAAGVLFP T FRLPPW Sbjct: 911 DLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCS 970
Query: 548 LFLKNYKKPSKL 583 L LKNYK+P KL Sbjct: 971 LLLKNYKRPKKL 982
>tr|B5AXJ0|B5AXJ0_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana GN=HMA5 PE=4 SV=1 Length = 995
Score = 263 bits (672), Expect = 8e-69 Identities = 132/192 (68%), Positives = 155/192 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A+ ++IL SM ++S+MVTGDNWGTAN+IAREVGI+ V AE +P+ KA+ V Sbjct: 792 SVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDSVIAEAKPEQKAEKV 851
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ + G +AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 852 KELQ-AAGHVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 910
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNYVWALGYN++GIPIAAGVLFP T FRLPPW Sbjct: 911 DLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCS 970
Query: 548 LFLKNYKKPSKL 583 L LKNYK+P KL Sbjct: 971 LLLKNYKRPKKL 982
>tr|B5AXI8|B5AXI8_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana GN=HMA5 PE=4 SV=1 Length = 995
Score = 263 bits (672), Expect = 8e-69 Identities = 132/192 (68%), Positives = 155/192 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A+ ++IL SM ++S+MVTGDNWGTAN+IAREVGI+ V AE +P+ KA+ V Sbjct: 792 SVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDSVIAEAKPEQKAEKV 851
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ + G +AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 852 KELQ-AAGHVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 910
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNYVWALGYN++GIPIAAGVLFP T FRLPPW Sbjct: 911 DLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCS 970
Query: 548 LFLKNYKKPSKL 583 L LKNYK+P KL Sbjct: 971 LLLKNYKRPKKL 982
>tr|B5AXI7|B5AXI7_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana GN=HMA5 PE=4 SV=1 Length = 995
Score = 263 bits (672), Expect = 8e-69 Identities = 132/192 (68%), Positives = 155/192 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A+ ++IL SM ++S+MVTGDNWGTAN+IAREVGI+ V AE +P+ KA+ V Sbjct: 792 SVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDSVIAEAKPEQKAEKV 851
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ + G +AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 852 KELQ-AAGHVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 910
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNYVWALGYN++GIPIAAGVLFP T FRLPPW Sbjct: 911 DLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCS 970
Query: 548 LFLKNYKKPSKL 583 L LKNYK+P KL Sbjct: 971 LLLKNYKRPKKL 982
>tr|B5AXI6|B5AXI6_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana GN=HMA5 PE=4 SV=1 Length = 995
Score = 263 bits (672), Expect = 8e-69 Identities = 132/192 (68%), Positives = 155/192 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A+ ++IL SM ++S+MVTGDNWGTAN+IAREVGI+ V AE +P+ KA+ V Sbjct: 792 SVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDSVIAEAKPEQKAEKV 851
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ + G +AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 852 KELQ-AAGHVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 910
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNYVWALGYN++GIPIAAGVLFP T FRLPPW Sbjct: 911 DLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCS 970
Query: 548 LFLKNYKKPSKL 583 L LKNYK+P KL Sbjct: 971 LLLKNYKRPKKL 982
>tr|A7QIV2|A7QIV2_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000405001 PE=3 SV=1 Length = 748
Score = 262 bits (670), Expect = 1e-68 Identities = 134/198 (67%), Positives = 157/198 (79%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 A+SDP+KP A+ V+ IL SM V+S++VTGDNWGTAN+IA+EVGIE V AE +P+ KA+ V Sbjct: 547 AISDPLKPGARDVITILKSMKVKSILVTGDNWGTANSIAQEVGIETVIAEAKPEHKAEKV 606
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 K LQ S G T+AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 607 KNLQAS-GYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 665
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNY+WALGYN+LGIPIAAG LFP +GFRLPPW Sbjct: 666 DLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPSSGFRLPPWIAGAAMAASSVSVVCCS 725
Query: 548 LFLKNYKKPSKLTASKFQ 601 L LK YK+P KL A + Q Sbjct: 726 LLLKYYKRPKKLDALEMQ 743
>tr|A7QIV0|A7QIV0_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000403001 PE=3 SV=1 Length = 625
Score = 262 bits (669), Expect = 2e-68 Identities = 134/198 (67%), Positives = 157/198 (79%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 A+SDP+KP A+ V++IL SM V+S+MVTGDNWGTAN+IA+EVGIE V A +P+ KA+ V Sbjct: 421 AISDPLKPGARDVISILKSMKVKSIMVTGDNWGTANSIAKEVGIETVIAGAKPEQKAEEV 480
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 K LQ S G T+AMVGDGINDSPALVAA++GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 481 KNLQAS-GHTVAMVGDGINDSPALVAANVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 539
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRLNY+WALGYN+LGIPIAAG LFP TGFRLPPW Sbjct: 540 DLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCS 599
Query: 548 LFLKNYKKPSKLTASKFQ 601 L LK YK+P KL A + Q Sbjct: 600 LLLKYYKRPEKLNALEMQ 617
>tr|B5AXM3|B5AXM3_ARATH Heavy metal P-type ATPase OS=Arabidopsis thaliana GN=HMA5 PE=4 SV=1 Length = 995
Score = 261 bits (666), Expect = 4e-68 Identities = 131/192 (68%), Positives = 154/192 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A+ ++IL SM ++S+MVTGDNWGTAN+IAREVGI+ V AE +P+ KA+ V Sbjct: 792 SVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDSVIAEAKPEQKAEKV 851
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ + G +AMVGDGINDSPALVAAD+GMAIGAGTDIAIEAADIVLM++NLEDV+TAI Sbjct: 852 KELQ-AAGHVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAI 910
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIRL YVWALGYN++GIPIAAGVLFP T FRLPPW Sbjct: 911 DLSRKTFSRIRLTYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCS 970
Query: 548 LFLKNYKKPSKL 583 L LKNYK+P KL Sbjct: 971 LLLKNYKRPKKL 982
>tr|Q6JAG3|Q6JAG3_SORBI Putative copper-exporting ATPase OS=Sorghum bicolor GN=SB20O07.23 PE=3 SV=1 Length = 908
Score = 258 bits (660), Expect = 2e-67 Identities = 128/189 (67%), Positives = 153/189 (80%) Frame = +2
Query: 8 AVSDPVKPEAKAVVAILSSMGVQSLMVTGDNWGTANAIAREVGIEKVFAETRPQGKADIV 187 +VSDP+KP A V++ L SM V+S+MVTGDNWGTANAI +EVGIEK+ AE +P+ KA+ V Sbjct: 716 SVSDPIKPNAHEVISYLKSMNVESIMVTGDNWGTANAIGKEVGIEKIIAEAKPEQKAERV 775
Query: 188 KELQQSTGKTIAMVGDGINDSPALVAADLGMAIGAGTDIAIEAADIVLMRNNLEDVVTAI 367 KELQ S G+T+AMVGDGINDSPALV+AD+G+AIGAGTD+AIEAADIVLM++NLEDV+TAI Sbjct: 776 KELQLS-GRTVAMVGDGINDSPALVSADVGLAIGAGTDVAIEAADIVLMKSNLEDVITAI 834
Query: 368 HLSKKTFRRIRLNYVWALGYNILGIPIAAGVLFPFTGFRLPPWXXXXXXXXXXXXXXXXX 547 LS+KTF RIR+NYVWALGYN++GIPIAAGVLFP TGFRLPPW Sbjct: 835 DLSRKTFFRIRMNYVWALGYNVIGIPIAAGVLFPSTGFRLPPWVAGAAMAASSVSVVCWS 894
Query: 548 LFLKNYKKP 574 L L+ YK P Sbjct: 895 LLLRYYKAP 903
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