BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960699|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_B22, 5'
         (444 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9DBA6|TYSD1_MOUSE Peroxisomal leader peptide-processing prot...    35   0.14 
sp|P92517|M760_ARATH Uncharacterized mitochondrial protein AtMg0...    32   1.5  
sp|Q2T9J0|TYSD1_HUMAN Peroxisomal leader peptide-processing prot...    30   3.4  
sp|Q67622|REP_WDVS Replication-associated protein OS=Wheat dwarf...    30   5.9  
sp|Q9HB29|ILRL2_HUMAN Interleukin-1 receptor-like 2 OS=Homo sapi...    29   10.0 
sp|O70585|DTNB_MOUSE Dystrobrevin beta OS=Mus musculus GN=Dtnb P...    29   10.0 

>sp|Q9DBA6|TYSD1_MOUSE Peroxisomal leader peptide-processing
           protease OS=Mus musculus GN=Tysnd1 PE=1 SV=1
          Length = 568

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 257 TERGTSLWGQHL*ARNSAGPYSLSESSL*SQPASPDAEGVD*SLPEGHKCRGKKISGIGF 436
           T +  ++WGQ + A     PY ++  SL       +  GV   +P GH   G+ +S +GF
Sbjct: 389 TPKNVAIWGQVVFATQETSPYDIAVVSL-----EEELNGVPTPVPAGHFHEGEPVSVVGF 443

Query: 437 PV 442
            V
Sbjct: 444 GV 445


>sp|P92517|M760_ARATH Uncharacterized mitochondrial protein
           AtMg00760 OS=Arabidopsis thaliana GN=AtMg00760 PE=4 SV=1
          Length = 109

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 352 GLGSQRRFRQRVWPGGVPCLEMLAPKTGAPFGISFYINQSSKY 224
           G+ S  R+  R WP  V C  + +  T AP+G + ++ +  K+
Sbjct: 36  GMLSSARYGLRRWPFTVKCSPLTSQSTTAPYGFTSFMRKGKKH 78


>sp|Q2T9J0|TYSD1_HUMAN Peroxisomal leader peptide-processing
           protease OS=Homo sapiens GN=TYSND1 PE=2 SV=3
          Length = 566

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +2

Query: 245 IKRNTERGTSLWGQHL*ARNSAGPYSLSESSL*SQPASPDAEGVD*SLPEGHKCRGKKIS 424
           ++  T +  ++WG+ + A     PY ++  SL       D + V   +P  H   G+ +S
Sbjct: 383 VRSTTPKSVAIWGRVVFATQETCPYDIAVVSL-----EEDLDDVPIPVPAEHFHEGEAVS 437

Query: 425 GIGFPV 442
            +GF V
Sbjct: 438 VVGFGV 443


>sp|Q67622|REP_WDVS Replication-associated protein OS=Wheat dwarf
           virus (isolate Sweden) GN=C1/C2 PE=1 SV=2
          Length = 351

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 7/35 (20%)
 Frame = -3

Query: 361 WRCGLGSQRRF-------RQRVWPGGVPCLEMLAP 278
           W+C +G+QR F       +++V  GG+PC+ ++ P
Sbjct: 271 WKCFVGAQRDFTVNPKYGKRKVIRGGIPCIILVNP 305


>sp|Q9HB29|ILRL2_HUMAN Interleukin-1 receptor-like 2 OS=Homo sapiens
           GN=IL1RL2 PE=2 SV=2
          Length = 575

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 410 RGTYGLQAMISRLPLHLEMRAGITTKIQTESMARRSSVPRDVGPKD 273
           RG Y  QA+++      E+  GIT  I TE      SVP+ + PK+
Sbjct: 190 RGNYACQAILTHSGKQYEVLNGITVSI-TERAGYGGSVPKIIYPKN 234


>sp|O70585|DTNB_MOUSE Dystrobrevin beta OS=Mus musculus GN=Dtnb PE=1
           SV=2
          Length = 700

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +3

Query: 189 AESESETLTALLYFDD*LI*KEIPKGAPV---FGANISRHGTPPGHTLCLNLRCDPSPHL 359
           A+S + T+++L+        KE+  GA      G   +R G PP    C +  C P P L
Sbjct: 585 ADSITNTMSSLV--------KELHSGAEAEEQAGTEKTREGLPPEAHSCPSFCCTPGPSL 636

Query: 360 QMQR 371
           Q  R
Sbjct: 637 QAAR 640

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960699|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_B22, 5'
         (444 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******