DK960701 [AcEST]

DK960701
Clone id	TST39A01NGRL0008_B24
Library	TST39
Length	687
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_B24. 5' end sequence.
Accession	DK960701
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	-
Sequence	ATCCTGTGACATCCTCTTGCAATTTCTTGGTGATGTCGGTTGTCTCTTCTCCCTCGTCTT CATCATTGACTATTGTCTTCCTTCTCGCTATCCATTGCCTATTGCTGTCAGGTTCTACGA GTTGGCGGGCAATGCGTGACGTTCATACTCTTGCCATTACATATTTTCCTTGTCTTTTCA TGGCTGGAGGCTTCTGATAGTTCCGTTTTTTGATTCGCATTAGAATCTTGGTGGAAGTGC TTATTGTTCAGAGGTTGATGTCATCCTCTCTCCACTTAGCTTGCTAAGGTCCCTTTTACT CTCGCTAGGAAATGTTTTACTTGGCTTTCAATTCTTATAGTTACCATGTGGCTAGTTATT TTTGGGTTTTACACTTTCCAGAGTATTGCCTTCATGCTTGCTTTGTAATCAATGATGGAC TTGCCCTTAGAATCGACACCGTTTAGGGGCCGTGAGTGACTTTTCAAGTAATAGAAATCA ATCTCCCACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAAATG AAATGAAATGTTATATTAACGTCTTCAAAAGGCCAAAATGACCTATGAGACCAATCAGTT ACAAAATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9ES88
Definition	sp\|Q9ES88\|S13A2_MOUSE Solute carrier family 13 member 2 OS=Mus musculus
Align length	40
Score (bit)	30.8
E-value	7.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960701\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_B24, 5' (687 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9ES88\|S13A2_MOUSE Solute carrier family 13 member 2 OS=Mus m... 31 7.1 >sp\|Q9ES88\|S13A2_MOUSE Solute carrier family 13 member 2 OS=Mus musculus GN=Slc13a2 PE=2 SV=1 Length = 586 Score = 30.8 bits (68), Expect = 7.1 Identities = 13/40 (32%), Positives = 26/40 (65%) Frame = -2 Query: 230 QDSNANQKTELSEASSHEKTRKICNGKSMNVTHCPPTRRT 111 ++ N+N EL EAS ++ K+ NG++++V+ P ++T Sbjct: 167 EEGNSNPSFELQEASPQKEETKLDNGQAVSVSSEPRAQKT 206
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q8CQX8
Definition	tr\|Q8CQX8\|Q8CQX8_STAES Putative uncharacterized protein OS=Staphylococcus epidermidis (strain ATCC 12228)
Align length	69
Score (bit)	35.0
E-value	4.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960701\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_B24, 5' (687 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q8CQX8\|Q8CQX8_STAES Putative uncharacterized protein OS=Staph... 35 4.5 >tr\|Q8CQX8\|Q8CQX8_STAES Putative uncharacterized protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2221 PE=4 SV=1 Length = 166 Score = 35.0 bits (79), Expect = 4.5 Identities = 18/69 (26%), Positives = 35/69 (50%) Frame = -2 Query: 272 ERGHQPLNNKHFHQDSNANQKTELSEASSHEKTRKICNGKSMNVTHCPPTRRTQQ*AM 93 + G QP ++HQ N NQ++ ++ +S E ++ N N ++ P + T QQ + Sbjct: 75 QSGTEQPAQQPNYHQYPNNNQQSGSNKNNSSENNKQKPNQNKTNQSYHQPAQSTPQQSSQ 134 Query: 92 DSEKEDNSQ 66 + + D+ Q Sbjct: 135 HNNQSDSQQ 143