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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960709
Clone id TST39A01NGRL0008_C09
Library
Length 605
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_C09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GGCATTGGCAAGACGCTTCCAGCCAGTGATGGTTGACGAACCTAGTCAGGAAGATACTGT
CCAAATTTTGTTGGGTCTTCGTGACAAGTATGAGAATCATCACAAGTGTATAATAACGGC
TGAAGCTGTAGAAGCAGCTGTGTCTCTGTCAGCCAGATATATAGCAGACCGATTTCTTCC
TGACAAAGCGATTGACTTGCTTGATGAGGCAGGCAGCCGGGCTCGCATTAATGCTTACAA
GAGGCGGAAGGAAAATCAGGTCGCAATTCTGTCTAGGTCCCCAAGTGAATACTGGCCAGA
AATTCGTGCAGTCCAGGCTTTCCAGGAATCGGTAAGTGTCGTACCAGAATTGTCTTCTGG
CAGTAGGGATTCAGCTTCAGAGATTGTAGAGACAGGACTCTCTGAAGCCCAAGATGCTAC
GTCTCTCAACTTGCGAAGTCTGCTTAACAGTGATGAATTTGAGAATGGGCCAGTTGTAGT
TGATGCTGCTGAAATTGCATCTGTAGCTTCCATGTGGTCTGGTATTCCAATTGAACAATT
GACCATTGATGAGCAAAATAAGCTCATAAATCTTGAGGAGGTGCTTCGAGGCCGGGTTGT
TGGGC
■■Homology search results ■■ -
sp_hit_id P42762
Definition sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis thaliana
Align length 201
Score (bit) 191.0
E-value 3.0e-48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960709|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_C09, 5'
         (605 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis ...   191   3e-48
sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subu...   137   3e-32
sp|Q8EU05|CLPB_OCEIH Chaperone protein clpB OS=Oceanobacillus ih...   129   9e-30
sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subu...   128   3e-29
sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subu...   125   2e-28
sp|P37571|CLPC_BACSU Negative regulator of genetic competence cl...   125   2e-28
sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subu...   123   8e-28
sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding sub...   121   2e-27
sp|Q9A9T4|CLPB_CAUCR Chaperone protein clpB OS=Caulobacter cresc...   120   7e-27
sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding sub...   120   7e-27
sp|P35100|CLPC_PEA ATP-dependent Clp protease ATP-binding subuni...   117   3e-26
sp|Q49V34|CLPC_STAS1 ATP-dependent Clp protease ATP-binding subu...   117   5e-26
sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subu...   116   1e-25
sp|Q9RVI3|CLPB_DEIRA Chaperone protein clpB OS=Deinococcus radio...   115   1e-25
sp|Q8CQ88|CLPC_STAES ATP-dependent Clp protease ATP-binding subu...   115   2e-25
sp|Q5HRM8|CLPC_STAEQ ATP-dependent Clp protease ATP-binding subu...   115   2e-25
sp|P24428|CLPC_MYCLE Probable ATP-dependent Clp protease ATP-bin...   113   9e-25
sp|Q2YSD6|CLPC_STAAB ATP-dependent Clp protease ATP-binding subu...   112   2e-24
sp|Q7X2S8|CLPB_MEIRU Chaperone protein clpB OS=Meiothermus ruber...   112   2e-24
sp|P0A522|CLPC_MYCTU Probable ATP-dependent Clp protease ATP-bin...   111   2e-24
sp|P0A523|CLPC_MYCBO Probable ATP-dependent Clp protease ATP-bin...   111   2e-24
sp|Q98G96|CLPB_RHILO Chaperone protein clpB OS=Rhizobium loti GN...   111   2e-24
sp|Q8NXY8|CLPC_STAAW ATP-dependent Clp protease ATP-binding subu...   111   3e-24
sp|Q6GBW3|CLPC_STAAS ATP-dependent Clp protease ATP-binding subu...   111   3e-24
sp|Q6GJE4|CLPC_STAAR ATP-dependent Clp protease ATP-binding subu...   111   3e-24
sp|Q7A797|CLPC_STAAN ATP-dependent Clp protease ATP-binding subu...   111   3e-24
sp|Q99W78|CLPC_STAAM ATP-dependent Clp protease ATP-binding subu...   111   3e-24
sp|P0C281|CLPC_STAAC ATP-dependent Clp protease ATP-binding subu...   111   3e-24
sp|Q2G0P5|CLPC_STAA8 ATP-dependent Clp protease ATP-binding subu...   111   3e-24
sp|Q2FJB5|CLPC_STAA3 ATP-dependent Clp protease ATP-binding subu...   111   3e-24

>sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis
            thaliana GN=ERD1 PE=2 SV=1
          Length = 945

 Score =  191 bits (484), Expect = 3e-48
 Identities = 102/201 (50%), Positives = 136/201 (67%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV+++EPS+ED V+ILLGLR+KYE HH C  T            RYIADRFLP
Sbjct: 442  ALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLP 501

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
            DKAIDL+DEAGSRARI A++++KE+ + ILS+ P++YW EI+ VQA  E V     LSS 
Sbjct: 502  DKAIDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVV-----LSSR 556

Query: 362  SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
             +    + +     E  + +S  L      DE    P++V   +IA+VAS+WSGIP++Q+
Sbjct: 557  QKQDDGDAISDESGELVEESS--LPPAAGDDE----PILVGPDDIAAVASVWSGIPVQQI 610

Query: 542  TIDEQNKLINLEEVLRGRVVG 604
            T DE+  L++LE+ LRGRVVG
Sbjct: 611  TADERMLLMSLEDQLRGRVVG 631


>sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1
          Length = 854

 Score =  137 bits (346), Expect = 3e-32
 Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRFQPVMV+EP+ E+T++IL GLRD+YE HH+  I+            +YIADRFLP
Sbjct: 359 ALERRFQPVMVEEPTVEETIEILRGLRDRYEAHHRLKISDSAIVAAAKLSDQYIADRFLP 418

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEA SR R+  YK         L  S      E+R +Q  +  +     + SG
Sbjct: 419 DKAIDLVDEASSRVRLMNYK---------LPPSAEYLDEELRHIQKIKNEL-----IRSG 464

Query: 362 SRDSASEIVETGLS-EAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQ 538
             + AS+  E  +  + Q A  +  +     +E    P +V+  +IA++ S W+GIP+ +
Sbjct: 465 DFEEASQFREREIEVKVQMAALMKAKKEAIEEELALNPPIVNEDDIANIVSSWTGIPVSK 524

Query: 539 LTIDEQNKLINLEEVLRGRVVG 604
           LT  E  KL+++EE L  R+VG
Sbjct: 525 LTKSESEKLLHMEETLHSRIVG 546


>sp|Q8EU05|CLPB_OCEIH Chaperone protein clpB OS=Oceanobacillus
           iheyensis GN=clpB PE=3 SV=1
          Length = 809

 Score =  129 bits (325), Expect = 9e-30
 Identities = 80/201 (39%), Positives = 110/201 (54%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRFQP+ VDEP+ E+T+QIL GLRD+YE HH+  IT            RYI DRFLP
Sbjct: 332 ALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAASLSDRYITDRFLP 391

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEAGS+ R+ +Y       +  L +   E   E  A    QE      E ++ 
Sbjct: 392 DKAIDLIDEAGSKVRLRSY--TVPPNLKELEQKLDEVRKEKDAAVQSQEF-----EKAAS 444

Query: 362 SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
            RDS     E    E  + T    +      + E     V   +IA+V S W+G+P+ +L
Sbjct: 445 LRDS-----EQRFREELETTKNQWKEKQGQTDSE-----VTMEDIAAVVSTWTGVPVSKL 494

Query: 542 TIDEQNKLINLEEVLRGRVVG 604
           T DE ++L+N+E++L  RV+G
Sbjct: 495 TKDETDRLLNMEKILHDRVIG 515


>sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1
          Length = 819

 Score =  128 bits (321), Expect = 3e-29
 Identities = 83/202 (41%), Positives = 114/202 (56%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRFQPVMV EPS E+T++IL GLRD+YE HHK +I+            +YIADRFLP
Sbjct: 328 ALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHKLVISDEALSAAAKFADQYIADRFLP 387

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESV-SVVPELSS 358
           DKAIDL+DEAGSR R+        +Q+   +R   +   EI  ++   E+V S   E + 
Sbjct: 388 DKAIDLIDEAGSRVRL------MNSQLPPAARELDKELREI--LKQKDEAVRSQDFETAG 439

Query: 359 GSRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQ 538
             RD   EI      +AQ A   +  S    +E      VV   +IA + + W+GIP+ +
Sbjct: 440 QLRDREMEI------KAQIAAIAH--SKKGDEENTKEVSVVTEEDIAQIVAAWTGIPVNK 491

Query: 539 LTIDEQNKLINLEEVLRGRVVG 604
           +T  E  KL+ +EE L GR++G
Sbjct: 492 MTRSESEKLLQMEETLHGRIIG 513


>sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1
          Length = 821

 Score =  125 bits (314), Expect = 2e-28
 Identities = 75/201 (37%), Positives = 112/201 (55%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRFQPV+V EPS E+T++IL GLRD+YE HH+  ++            +YI+DRFLP
Sbjct: 331 ALERRFQPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYANQYISDRFLP 390

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEAGSR R+        +Q+   +R   E   E+RAV   ++      +  + 
Sbjct: 391 DKAIDLIDEAGSRVRL------LNSQLPPAAR---ELDKELRAVLKTKDEAIRAQKYETA 441

Query: 362 SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
            +  A E+      E +   +   +S  N  +      VV   +IA + + W+GIP+ +L
Sbjct: 442 EQYRAREM------EIKAQIAAIAQSKKNEPDLNLEDPVVTEDDIAEIVAAWTGIPVTKL 495

Query: 542 TIDEQNKLINLEEVLRGRVVG 604
           T  E  KL+++EE L GR++G
Sbjct: 496 TKSESEKLMHMEETLHGRIIG 516


>sp|P37571|CLPC_BACSU Negative regulator of genetic competence
           clpC/mecB OS=Bacillus subtilis GN=clpC PE=3 SV=1
          Length = 810

 Score =  125 bits (314), Expect = 2e-28
 Identities = 77/201 (38%), Positives = 111/201 (55%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRFQP+ VD+PS ++++QIL GLRD+YE HH+  IT            RYI+DRFLP
Sbjct: 329 ALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLP 388

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEAGS+ R+ ++       +  L +   E   E  A    QE      E ++ 
Sbjct: 389 DKAIDLIDEAGSKVRLRSF--TTPPNLKELEQKLDEVRKEKDAAVQSQEF-----EKAAS 441

Query: 362 SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
            RD+   + E    + +D      +S       EN  V VD  +IA V S W+G+P+ ++
Sbjct: 442 LRDTEQRLRE----QVEDTK----KSWKEKQGQENSEVTVD--DIAMVVSSWTGVPVSKI 491

Query: 542 TIDEQNKLINLEEVLRGRVVG 604
              E +KL+N+E +L  RV+G
Sbjct: 492 AQTETDKLLNMENILHSRVIG 512


>sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1
          Length = 821

 Score =  123 bits (308), Expect = 8e-28
 Identities = 74/201 (36%), Positives = 110/201 (54%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRF PV+V EPS E+T++IL GLRD+YE HH+  ++            +YI+DRFLP
Sbjct: 331 ALERRFHPVVVGEPSVEETIEILFGLRDRYEKHHQLTMSDGALAAAAKYANQYISDRFLP 390

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEAGSR R+        +Q+   +R   E   E+RAV   ++      +  + 
Sbjct: 391 DKAIDLIDEAGSRVRL------LNSQLPPAAR---ELDKELRAVLKTKDEAIRAQKYETA 441

Query: 362 SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
            +  A E+      E +   +   +S  N  +      VV   +IA + + W+GIP+ +L
Sbjct: 442 EQYRAREM------EIKAQIAAIAQSKKNEPDLNLEDPVVTEDDIAEIVAAWTGIPVTKL 495

Query: 542 TIDEQNKLINLEEVLRGRVVG 604
           T  E  KL+ +EE L GR++G
Sbjct: 496 TKSESEKLMQMEETLHGRIIG 516


>sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding
           subunit clpA homolog CD4B, chloroplastic OS=Solanum
           lycopersicum GN=CD4B PE=3 SV=1
          Length = 923

 Score =  121 bits (304), Expect = 2e-27
 Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRFQPV V EP+ ++T+QIL GLR++YE HHK   T            +YI+DRFLP
Sbjct: 421 ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFLP 480

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEAGSR R+         + A L     E   E+R +   +        +   
Sbjct: 481 DKAIDLIDEAGSRVRL---------RHAQLPEEAKELEKELRQITKEKNEA-----VRGQ 526

Query: 362 SRDSASEIVETGLSEAQDATSLNLR----SLLNSDEFENGPVVVDAAEIASVASMWSGIP 529
             + A E+ +  +      T+L  +    S   S+  + GP+V + A+I  + S W+GIP
Sbjct: 527 DFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADTGPLVTE-ADIQHIVSSWTGIP 585

Query: 530 IEQLTIDEQNKLINLEEVLRGRVVG 604
           +E+++ DE ++L+ +EE L  R++G
Sbjct: 586 VEKVSTDESDRLLKMEETLHTRIIG 610


>sp|Q9A9T4|CLPB_CAUCR Chaperone protein clpB OS=Caulobacter crescentus
            GN=clpB PE=3 SV=1
          Length = 859

 Score =  120 bits (300), Expect = 7e-27
 Identities = 88/245 (35%), Positives = 118/245 (48%), Gaps = 44/245 (17%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV V EP+ EDTV IL GL++KYE HH   I+            RYIADRFLP
Sbjct: 328  ALARRFQPVFVSEPTVEDTVSILRGLKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLP 387

Query: 182  DKAIDLLDEAGSRARIN-------------------------------AYKRRKEN---- 256
            DKAIDL+DEA SR R+                                A K+R EN    
Sbjct: 388  DKAIDLVDEASSRVRMQIDSKPEELDEIDRRLVQLKIEREALSKETDAASKQRLENLEVE 447

Query: 257  --QVAILSRSPSEYWPEIR-----AVQAFQESVSVVPELSSGSRDSASEIVETGLSEAQD 415
               +   S   +  W   +     A QA +    +  +L++  R  A +    G  +  +
Sbjct: 448  IDDLQFRSDEMTARWKAEKEKVGGAAQAREALDRLRADLANAQR--AGDFARAGQIQYGE 505

Query: 416  ATSL--NLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQLTIDEQNKLINLEEVLR 589
              +L   L      D     P VVDA +IA+V S W+G+P+E++   E+ KL+ +E+ LR
Sbjct: 506  IPALERRLAEAEAGDTQALTPEVVDAEQIAAVVSRWTGVPVEKMLEGEREKLLKMEDELR 565

Query: 590  GRVVG 604
            GRVVG
Sbjct: 566  GRVVG 570


>sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding
           subunit clpA homolog CD4A, chloroplastic OS=Solanum
           lycopersicum GN=CD4A PE=3 SV=1
          Length = 926

 Score =  120 bits (300), Expect = 7e-27
 Identities = 75/205 (36%), Positives = 111/205 (54%), Gaps = 4/205 (1%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           AL RRFQPV V EPS ++T+QIL GLR++YE HHK   T            +YI+DRFLP
Sbjct: 423 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLP 482

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEAGSR R+         + A L     E   E+R +   +        +   
Sbjct: 483 DKAIDLIDEAGSRVRL---------RHAQLPEEARELEKELRQITKEKNEA-----VRGQ 528

Query: 362 SRDSASEIVETGLS-EAQDATSLNLRSLLNSDEFENGPV---VVDAAEIASVASMWSGIP 529
             + A E+ +  +  +AQ +  ++     +  E E G     +V  A+I  + S W+GIP
Sbjct: 529 DFEKAGELRDREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIP 588

Query: 530 IEQLTIDEQNKLINLEEVLRGRVVG 604
           +E+++ DE ++L+ +EE L  RV+G
Sbjct: 589 VEKVSTDESDRLLKMEETLHTRVIG 613
tr_hit_id A9RDJ6
Definition tr|A9RDJ6|A9RDJ6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 202
Score (bit) 208.0
E-value 2.0e-52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960709|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_C09, 5'
         (605 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RDJ6|A9RDJ6_PHYPA Predicted protein OS=Physcomitrella paten...   208   2e-52
tr|A9RTE5|A9RTE5_PHYPA Predicted protein OS=Physcomitrella paten...   207   5e-52
tr|A7P2B2|A7P2B2_VITVI Chromosome chr19 scaffold_4, whole genome...   192   2e-47
tr|A5B4Z4|A5B4Z4_VITVI Putative uncharacterized protein OS=Vitis...   192   2e-47
tr|Q94C10|Q94C10_ARATH AT5g51070/K3K7_27 OS=Arabidopsis thaliana...   191   4e-47
tr|Q01L44|Q01L44_ORYSA H0502B11.7 protein OS=Oryza sativa GN=H05...   189   8e-47
tr|B8ATH4|B8ATH4_ORYSI Putative uncharacterized protein OS=Oryza...   189   8e-47
tr|A3ATJ7|A3ATJ7_ORYSJ Putative uncharacterized protein OS=Oryza...   189   8e-47
tr|Q8GT62|Q8GT62_ORYSI ATP-dependent Clp protease ATP-binding su...   183   8e-45
tr|A2X5I8|A2X5I8_ORYSI Putative uncharacterized protein OS=Oryza...   183   8e-45
tr|Q6H795|Q6H795_ORYSJ Os02g0526400 protein OS=Oryza sativa subs...   182   1e-44
tr|A3A7I6|A3A7I6_ORYSJ Putative uncharacterized protein OS=Oryza...   182   1e-44
tr|Q7XL03|Q7XL03_ORYSJ OJ000315_02.14 protein OS=Oryza sativa su...   148   3e-34
tr|Q31AD7|Q31AD7_PROM9 ATPase OS=Prochlorococcus marinus (strain...   132   2e-29
tr|B1I0S4|B1I0S4_DESAP ATPase AAA-2 domain protein OS=Desulforud...   132   2e-29
tr|A5GS32|A5GS32_SYNR3 ATP-dependent Clp protease ATP-binding su...   132   2e-29
tr|A8CRZ3|A8CRZ3_9CHLR ATPase AAA-2 domain protein OS=Dehalococc...   132   2e-29
tr|Q3ZAD9|Q3ZAD9_DEHE1 ATP-dependent Clp protease, ATP-binding s...   130   6e-29
tr|B1XLJ5|B1XLJ5_SYNP2 Endopeptidase Clp, ATP-binding chain C, p...   130   6e-29
tr|A2BX75|A2BX75_PROM5 ClpC OS=Prochlorococcus marinus (strain M...   129   1e-28
tr|B1R1Q1|B1R1Q1_CLOBU Negative regulator of genetic competence ...   129   1e-28
tr|Q3ZWB9|Q3ZWB9_DEHSC ATP-dependent Clp protease, ATP-binding s...   129   2e-28
tr|Q3A9N1|Q3A9N1_CARHZ Negative regulator of genetic competence ...   129   2e-28
tr|A5FSU5|A5FSU5_DEHSB ATPase AAA-2 domain protein OS=Dehalococc...   129   2e-28
tr|Q2B1J7|Q2B1J7_9BACI Class III stress response-related ATPase ...   129   2e-28
tr|Q85G08|Q85G08_CYAME ATP-dependent clp protease ATP-binding su...   128   2e-28
tr|A5D5K8|A5D5K8_PELTS ATPase with chaperone activity, ATP-bindi...   128   3e-28
tr|Q55662|Q55662_SYNY3 ATP-dependent Clp protease regulatory sub...   127   4e-28
tr|B7DS22|B7DS22_9BACL ATPase AAA-2 domain protein OS=Alicycloba...   127   4e-28
tr|A2UA02|A2UA02_BACCO ATPase AAA-2 OS=Bacillus coagulans 36D1 G...   127   4e-28

>tr|A9RDJ6|A9RDJ6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112168 PE=3 SV=1
          Length = 881

 Score =  208 bits (529), Expect = 2e-52
 Identities = 118/202 (58%), Positives = 141/202 (69%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           ALARRFQPVMV EPSQED V IL+GLR +YE HH+C IT            RYIADRFLP
Sbjct: 366 ALARRFQPVMVLEPSQEDAVTILMGLRSRYEEHHRCHITSEAVETAVYLASRYIADRFLP 425

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVP-ELSS 358
           DKAIDLLDEAGSRARIN++++RKE Q +IL++SPSEYW EIRAVQA QESVS     ++ 
Sbjct: 426 DKAIDLLDEAGSRARINSFRKRKERQTSILTKSPSEYWREIRAVQASQESVSSFSYRINP 485

Query: 359 GSRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQ 538
               S    +   +S + DA              E+ PVVV  +EIA+VASMWSGIP+EQ
Sbjct: 486 CGYFSRLGSILVSVSGSTDAPG------------EDLPVVVGPSEIAAVASMWSGIPVEQ 533

Query: 539 LTIDEQNKLINLEEVLRGRVVG 604
           LT DEQ KL+NLE++L+ RVVG
Sbjct: 534 LTNDEQIKLMNLEKLLQTRVVG 555


>tr|A9RTE5|A9RTE5_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_177939 PE=3 SV=1
          Length = 974

 Score =  207 bits (526), Expect = 5e-52
 Identities = 116/201 (57%), Positives = 140/201 (69%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPVMV EPSQED V IL+GLR +YE HHKC IT            RYIADRFLP
Sbjct: 452  ALARRFQPVMVLEPSQEDAVTILMGLRSRYEEHHKCHITSEAVEAAVYLASRYIADRFLP 511

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
            DKAIDLLDEAGSRARIN++++RKE Q +IL++SPSE W EIRAVQA +  V      S  
Sbjct: 512  DKAIDLLDEAGSRARINSFRKRKERQTSILTKSPSEIWQEIRAVQASEADVLTGDPSSLS 571

Query: 362  SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
            + +S    ++       D  +L+  S+++ DE    PVVV   EIA+VASMWSGIP+EQL
Sbjct: 572  TTESRIGDMDNESLSVPDNDALD-ASIVSDDE---EPVVVGPGEIAAVASMWSGIPVEQL 627

Query: 542  TIDEQNKLINLEEVLRGRVVG 604
            T DEQ KL+NLE+ L+ RVVG
Sbjct: 628  TSDEQMKLMNLEKSLQTRVVG 648


>tr|A7P2B2|A7P2B2_VITVI Chromosome chr19 scaffold_4, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00027951001
            PE=3 SV=1
          Length = 934

 Score =  192 bits (487), Expect = 2e-47
 Identities = 105/202 (51%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV+++EPSQE+ V+ILLGLR+KYE HHKC  T            RYI DR LP
Sbjct: 431  ALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAAVHLSARYIPDRRLP 490

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
            DKAIDL+DEAGS+AR+ AYKR+KE Q ++L +SP +YW EIRAV+A  E V         
Sbjct: 491  DKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAVKAMHEMV--------- 541

Query: 362  SRDSASEIVE-TGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQ 538
                AS++    G S  +D +++   S L S   +N P+VV   EIA VAS+WSGIP++Q
Sbjct: 542  ---MASKLKNCNGASCMEDGSTVLFESPLPSMSDDNEPIVVGPNEIAVVASLWSGIPVQQ 598

Query: 539  LTIDEQNKLINLEEVLRGRVVG 604
            +T DE+  L+ L E LR RVVG
Sbjct: 599  ITADERMLLVGLHEQLRKRVVG 620


>tr|A5B4Z4|A5B4Z4_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_012383 PE=3 SV=1
          Length = 946

 Score =  192 bits (487), Expect = 2e-47
 Identities = 105/202 (51%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV+++EPSQE+ V+ILLGLR+KYE HHKC  T            RYI DR LP
Sbjct: 443  ALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAAVHLSARYIPDRRLP 502

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
            DKAIDL+DEAGS+AR+ AYKR+KE Q ++L +SP +YW EIRAV+A  E V         
Sbjct: 503  DKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAVKAMHEMV--------- 553

Query: 362  SRDSASEIVE-TGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQ 538
                AS++    G S  +D +++   S L S   +N P+VV   EIA VAS+WSGIP++Q
Sbjct: 554  ---MASKLKNCNGASCMEDGSTVLFESPLPSMSDDNEPIVVGPNEIAVVASLWSGIPVQQ 610

Query: 539  LTIDEQNKLINLEEVLRGRVVG 604
            +T DE+  L+ L E LR RVVG
Sbjct: 611  ITADERMLLVGLHEQLRKRVVG 632


>tr|Q94C10|Q94C10_ARATH AT5g51070/K3K7_27 OS=Arabidopsis thaliana PE=2
            SV=1
          Length = 640

 Score =  191 bits (484), Expect = 4e-47
 Identities = 102/201 (50%), Positives = 136/201 (67%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV+++EPS+ED V+ILLGLR+KYE HH C  T            RYIADRFLP
Sbjct: 442  ALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLP 501

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
            DKAIDL+DEAGSRARI A++++KE+ + ILS+ P++YW EI+ VQA  E V     LSS 
Sbjct: 502  DKAIDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVV-----LSSR 556

Query: 362  SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
             +    + +     E  + +S  L      DE    P++V   +IA+VAS+WSGIP++Q+
Sbjct: 557  QKQDDGDAISDESGELVEESS--LPPAAGDDE----PILVGPDDIAAVASVWSGIPVQQI 610

Query: 542  TIDEQNKLINLEEVLRGRVVG 604
            T DE+  L++LE+ LRGRVVG
Sbjct: 611  TADERMLLMSLEDQLRGRVVG 631


>tr|Q01L44|Q01L44_ORYSA H0502B11.7 protein OS=Oryza sativa
            GN=H0502B11.7 PE=3 SV=1
          Length = 937

 Score =  189 bits (481), Expect = 8e-47
 Identities = 103/204 (50%), Positives = 135/204 (66%), Gaps = 3/204 (1%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV+V+EPSQED V+ILLGLR+KYE +HKC  T            RYIADR LP
Sbjct: 430  ALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLP 489

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQE---SVSVVPEL 352
            DKAIDL+DEAGSRAR+ ++KR+KE Q +ILS+SP EYW EIRAVQ   E   +  V   L
Sbjct: 490  DKAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSL 549

Query: 353  SSGSRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPI 532
            +   ++ A +I   G  +   A+ L+  +        + P +V + EIA V S+WSGIP+
Sbjct: 550  NQNDQEDAVDIELVGEDKTSPASMLSTST--------DKPSLVGSEEIARVTSLWSGIPV 601

Query: 533  EQLTIDEQNKLINLEEVLRGRVVG 604
            +QLT DE+  L+ L++ LR RV+G
Sbjct: 602  QQLTADERKLLVGLDDELRKRVIG 625


>tr|B8ATH4|B8ATH4_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_15769 PE=4 SV=1
          Length = 956

 Score =  189 bits (481), Expect = 8e-47
 Identities = 103/204 (50%), Positives = 135/204 (66%), Gaps = 3/204 (1%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV+V+EPSQED V+ILLGLR+KYE +HKC  T            RYIADR LP
Sbjct: 430  ALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLP 489

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQE---SVSVVPEL 352
            DKAIDL+DEAGSRAR+ ++KR+KE Q +ILS+SP EYW EIRAVQ   E   +  V   L
Sbjct: 490  DKAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSL 549

Query: 353  SSGSRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPI 532
            +   ++ A +I   G  +   A+ L+  +        + P +V + EIA V S+WSGIP+
Sbjct: 550  NQNDQEDAVDIELVGEDKTSPASMLSTST--------DKPSLVGSEEIARVTSLWSGIPV 601

Query: 533  EQLTIDEQNKLINLEEVLRGRVVG 604
            +QLT DE+  L+ L++ LR RV+G
Sbjct: 602  QQLTADERKLLVGLDDELRKRVIG 625


>tr|A3ATJ7|A3ATJ7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_014119 PE=3 SV=1
          Length = 890

 Score =  189 bits (481), Expect = 8e-47
 Identities = 103/204 (50%), Positives = 135/204 (66%), Gaps = 3/204 (1%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           ALARRFQPV+V+EPSQED V+ILLGLR+KYE +HKC  T            RYIADR LP
Sbjct: 358 ALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLP 417

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQE---SVSVVPEL 352
           DKAIDL+DEAGSRAR+ ++KR+KE Q +ILS+SP EYW EIRAVQ   E   +  V   L
Sbjct: 418 DKAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSL 477

Query: 353 SSGSRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPI 532
           +   ++ A +I   G  +   A+ L+  +        + P +V + EIA V S+WSGIP+
Sbjct: 478 NQNDQEDAVDIELVGEDKTSPASMLSTST--------DKPSLVGSEEIARVTSLWSGIPV 529

Query: 533 EQLTIDEQNKLINLEEVLRGRVVG 604
           +QLT DE+  L+ L++ LR RV+G
Sbjct: 530 QQLTADERKLLVGLDDELRKRVIG 553


>tr|Q8GT62|Q8GT62_ORYSI ATP-dependent Clp protease ATP-binding subunit
            OS=Oryza sativa subsp. indica GN=CLPD1 PE=1 SV=1
          Length = 938

 Score =  183 bits (464), Expect = 8e-45
 Identities = 103/201 (51%), Positives = 131/201 (65%)
 Frame = +2

Query: 2    ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
            ALARRFQPV+V+EPSQ+D V+ILLGLR+KYE +HKC  T            RYI DR LP
Sbjct: 436  ALARRFQPVLVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINAAVYLSARYIPDRQLP 495

Query: 182  DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
            DKAIDL+DEAGSRAR+ ++ R+KE Q +IL +SP EYW EIRA Q   E V       S 
Sbjct: 496  DKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQNMHEVV-------SS 548

Query: 362  SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
            ++   S   E G S A  A S ++  L +  + E  P+VV   EIA VAS+WSGIP++QL
Sbjct: 549  NQMKYSPCQENG-SAAIKAPSEDMNELTSELQVEE-PIVVGTEEIARVASLWSGIPVQQL 606

Query: 542  TIDEQNKLINLEEVLRGRVVG 604
            T D++  L+ L+  LR RV+G
Sbjct: 607  TADDRKLLVGLDGELRKRVIG 627


>tr|A2X5I8|A2X5I8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07468 PE=3 SV=1
          Length = 889

 Score =  183 bits (464), Expect = 8e-45
 Identities = 103/201 (51%), Positives = 131/201 (65%)
 Frame = +2

Query: 2   ALARRFQPVMVDEPSQEDTVQILLGLRDKYENHHKCIITXXXXXXXXXXXXRYIADRFLP 181
           ALARRFQPV+V+EPSQ+D V+ILLGLR+KYE +HKC  T            RYI DR LP
Sbjct: 387 ALARRFQPVLVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINAAVYLSARYIPDRQLP 446

Query: 182 DKAIDLLDEAGSRARINAYKRRKENQVAILSRSPSEYWPEIRAVQAFQESVSVVPELSSG 361
           DKAIDL+DEAGSRAR+ ++ R+KE Q +IL +SP EYW EIRA Q   E V       S 
Sbjct: 447 DKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQNMHEVV-------SS 499

Query: 362 SRDSASEIVETGLSEAQDATSLNLRSLLNSDEFENGPVVVDAAEIASVASMWSGIPIEQL 541
           ++   S   E G S A  A S ++  L +  + E  P+VV   EIA VAS+WSGIP++QL
Sbjct: 500 NQMKYSPCQENG-SAAIKAPSEDMNELTSELQVEE-PIVVGTEEIARVASLWSGIPVQQL 557

Query: 542 TIDEQNKLINLEEVLRGRVVG 604
           T D++  L+ L+  LR RV+G
Sbjct: 558 TADDRKLLVGLDGELRKRVIG 578