DK960730
Clone id TST39A01NGRL0008_D07
Library
Length 701
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_D07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CTCCATTATCTCCTCCAAAAGTTTCAGAAGATCAAGGGACGGCGTTGCCTGCCAGCTCTT
CCGGAAGCTGCAAGGCAGATCGGAAGAAGAGAGGAACGAGATATTTCTGTTTTCTGCTTC
CCATTGCATGCAAACTTCAAGGAAGCGTCCCTTCGCCAGCCGATCATCTCTTGTCACCCA
TAACCAGGTCTGTTAACACTCTGTTTTTTAAACCCTAAGTGAAAGCCCTCGATTCTGCGT
TTTGTTGTCCTTTTGATGTCTGGAAGGGGTTCAGTCGCGCATTGCACACCTTCTTGCGTT
GCGTACCATGGTCGCCTCAGCCTTCTCGTAAGGTGCAGGTCTTCTTTTCTGCTCTCTTCT
GGGCATTCTCTTACTTGGCCCAGGTGAAAGATCATACCATCTCATCTCATTGCTATTTAC
GCAGAAGTAACTGTTTCTTTGCGTTCTTGTCAACGAATTACCTTATTGCTATGGTCCAGC
CCAAGCTTTCATCTTGTTATCTTTTGTATCCTGCGGATGTAGGAAGTATGCTGATTCCTA
TGAGTAGTCTCTCTTCATTTATAAATTTTTCTTGTTCTTGCTTCATTTGTTTCTGCAAAT
TATTGCATGCCAAGAAGCAGGTCTTATGTCTTTTGCTACATTTTGAGTGGGACTATAGTT
TTGATGTGCTACTTTTCATTTCATGTTAATATTCAAATATC
■■Homology search results ■■ -
sp_hit_id Q12884
Definition sp|Q12884|SEPR_HUMAN Seprase OS=Homo sapiens
Align length 64
Score (bit) 32.3
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960730|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D07, 5'
(701 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q12884|SEPR_HUMAN Seprase OS=Homo sapiens GN=FAP PE=1 SV=4 32 2.5
sp|Q7TN08|DACT2_MOUSE Dapper homolog 2 OS=Mus musculus GN=Dact2 ... 32 3.3
sp|Q0WNY5|WAKLN_ARATH Wall-associated receptor kinase-like 18 OS... 32 4.3
sp|Q65SH4|ASSY_MANSM Argininosuccinate synthase OS=Mannheimia su... 31 7.4
sp|Q9ZNZ7|GLTB1_ARATH Ferredoxin-dependent glutamate synthase 1,... 30 9.6

>sp|Q12884|SEPR_HUMAN Seprase OS=Homo sapiens GN=FAP PE=1 SV=4
Length = 760

Score = 32.3 bits (72), Expect = 2.5
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -3

Query: 189 TWL-WVTRDDRLAKGRFLEVCMQWEAENRNISFLSSSDLPCSFRKSWQATPSLDLLKLLE 13
+WL WVT D+R VC+QW +N+S LS C FR+ WQ + D K E
Sbjct: 294 SWLTWVT-DER--------VCLQWLKRVQNVSVLSI----CDFREDWQ---TWDCPKTQE 337

Query: 12 EIME 1
I E
Sbjct: 338 HIEE 341


>sp|Q7TN08|DACT2_MOUSE Dapper homolog 2 OS=Mus musculus GN=Dact2
PE=2 SV=2
Length = 757

Score = 32.0 bits (71), Expect = 3.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3

Query: 384 PGPSKRMPRREQKRRPAPYEKAEATMVRNARRCAMRD*TPSRHQKD 247
PGPS +PR KR P ++ T+ R CA + PS H D
Sbjct: 601 PGPSMGLPRSPAKRGSGPRAQSRPTLARQ-DACARCESDPSEHSAD 645


>sp|Q0WNY5|WAKLN_ARATH Wall-associated receptor kinase-like 18
OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1
Length = 793

Score = 31.6 bits (70), Expect = 4.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3

Query: 174 TRDDRLAKGRFLEVCMQWEAENRNISFLSSSDLPCSFRKSWQATPSLD 31
T+ + L R+ V + W + N SFL S L C R+ ++ T +L+
Sbjct: 262 TKTEHLLAKRYATVSLGWVIQTSNRSFLDSLALACKDREDYRNTTNLE 309


>sp|Q65SH4|ASSY_MANSM Argininosuccinate synthase OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=argG PE=3 SV=1
Length = 444

Score = 30.8 bits (68), Expect = 7.4
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -2

Query: 211 LKNRVLTDLVMGDKR*SAGEGTLP*SLHAMGSRKQKYLVPLFFRSALQLPEELAGNAVP* 32
+ N +L +L +G K A G L S + R QK VP + + L P+E NA+P
Sbjct: 1 MSNTILQNLPLGQKVGIAFSGGLDTSAALLWMR-QKGAVPYAYTANLGQPDEDDYNAIPK 59

Query: 31 SSETFGGDN 5
+ +G +N
Sbjct: 60 KAMAYGAEN 68


>sp|Q9ZNZ7|GLTB1_ARATH Ferredoxin-dependent glutamate synthase 1,
chloroplastic OS=Arabidopsis thaliana GN=GLU1 PE=1 SV=2
Length = 1648

Score = 30.4 bits (67), Expect = 9.6
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -3

Query: 141 LEVCMQWEAENRNISFLSSSDLPC----SFRKSWQATPSLDLLKLLEEI 7
LE C QW N+ ++F+ + +P +K++ + LLK+L ++
Sbjct: 806 LETCRQWRLSNKTVAFMRNGKIPTVTIEQAQKNYTKAVNAGLLKILSKM 854


tr_hit_id B4HL29
Definition tr|B4HL29|B4HL29_DROSE GM23753 OS=Drosophila sechellia
Align length 122
Score (bit) 35.8
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960730|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D07, 5'
(701 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4HL29|B4HL29_DROSE GM23753 OS=Drosophila sechellia GN=GM2375... 36 2.7
tr|B0DGA8|B0DGA8_LACBS Predicted protein OS=Laccaria bicolor (st... 35 4.7
tr|Q5TLN1|Q5TLN1_ANGJA Reverse transcriptase OS=Anguilla japonic... 35 6.1
tr|A5D7B7|A5D7B7_BOVIN FAP protein OS=Bos taurus GN=FAP PE=2 SV=1 34 7.9

>tr|B4HL29|B4HL29_DROSE GM23753 OS=Drosophila sechellia GN=GM23753
PE=4 SV=1
Length = 558

Score = 35.8 bits (81), Expect = 2.7
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 15/122 (12%)
Frame = +3

Query: 186 RSVNTLFFKP*VKALDSAFCCPFDVWKGFSRALHTF---LRCVPWSPQPSRKVQVFFSAL 356
R++ +F+ V L + C + V F L TF LR + W VF AL
Sbjct: 139 RTIYHIFYIILVMFLLNVICYDYFVDGRFDLGLGTFRSGLRRLHWVMGVWLLEHVFVLAL 198

Query: 357 FWAFSYLAQVKDHTISSHCYLRR------------SNCFFAFLSTNYLIAMVQPKLSSCY 500
++AF A V+ H + H +L+R S F F+ST+ + P +S+C
Sbjct: 199 YFAFRGWALVR-HKLKPHSFLQRFWSHSCLILYISSQLVFCFVSTSLCLKFNLPFVSACV 257

Query: 501 LL 506
LL
Sbjct: 258 LL 259


>tr|B0DGA8|B0DGA8_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_328883 PE=4 SV=1
Length = 287

Score = 35.0 bits (79), Expect = 4.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3

Query: 384 PGPSKRMPRREQKRRPAPYEKAEATMVRNARRCAMRD*TPSRHQKDNKTQN 232
P P +R PRR +R+PAP A T NA+ + +R DNK ++
Sbjct: 144 PRPHQRHPRRRPQRQPAPTTTASTTPTNNAKTRTHDENANTRRGGDNKMRH 194


>tr|Q5TLN1|Q5TLN1_ANGJA Reverse transcriptase OS=Anguilla japonica
PE=4 SV=1
Length = 967

Score = 34.7 bits (78), Expect = 6.1
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +3

Query: 261 WKGFSRALHTFLRCVPWSPQPSRKVQVFFSALFWAFSYLAQVKDHTISSHCYLRRSNCFF 440
WKG + A H + VP Q S + FS + S + + H S HCY + FF
Sbjct: 646 WKGSASASHPLVTGVP---QGSVLGPLLFS--LYTRSLGSVINSHGFSYHCYADDTQLFF 700

Query: 441 AFLSTNYLIAMVQPKLSSC 497
+F + + V K+SSC
Sbjct: 701 SFPPS---VTQVNDKISSC 716


>tr|A5D7B7|A5D7B7_BOVIN FAP protein OS=Bos taurus GN=FAP PE=2 SV=1
Length = 760

Score = 34.3 bits (77), Expect = 7.9
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3

Query: 189 TWL-WVTRDDRLAKGRFLEVCMQWEAENRNISFLSSSDLPCSFRKSWQ 49
+WL WVT DDR +C+QW +N+S LS+ C FR+ WQ
Sbjct: 294 SWLTWVT-DDR--------ICLQWLKRIQNVSVLST----CDFREDWQ 328