DK960734 |
Clone id |
TST39A01NGRL0008_D11 |
Library |
TST39 |
Length |
692 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_D11. 5' end sequence. |
Accession |
DK960734 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1502Contig1 |
Sequence |
GTTCTGGGGCGTCTGAGGGTCTTTTTCAGCCATTTCGCGGGTTCGAAGGATCGATAGGGT TTCTTGTAACAAGTCCCTGCGAGGACTGATGCCTTGACATTGCGGATGGACGGTGCTTTC ACAGAATAGCCCACGTTTTCTCAAGCAGCTAATGGCTTTATTTGATCCTGCGGGAGCGCA AGTACTGGATGTTGTGCCTTCCTCTTCTGCTGCTGCAATTGCTTCAGCTCCATCGAGATC CCGCTCTGTAACAGAAACAATCAATGGTTCTCACCATTTCACCATCCAGGGATACTCTCT CGCAAAGGGTATGGGCGTTGGCAAGTATATTTCAAGCGACACCTTTTCTGTTGGGGGCTA TCAGTGGGCTGTCTACTTTTATCCCGATGGTAAAAATCCAGAAGATCAGTCCATTTATGT CTCTGTCTTCATAGCCCTGGCCAGTGAAGGCACAGACGTTCGTGCCCTTTTTGAATTGAC TCTTCTTGATCAAAGTGGAAGGGGAAAACACAAAGTGCACAGCCATTTTGACCGTGCTCT TGAAAGTGGTCCTTACACTCTTAAATACAGAGGCAGTATGTGGGGCTACAAGCGGTTTTT CAGACGCACGGGGTTGGAGACCTCTGACTATCTNAAGAATGATCGCCTTTCTATCAGCTG CACAGTCGGTGTTGTAGTGTCCTCTACTCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6P8B3 |
Definition |
sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis |
Align length |
150 |
Score (bit) |
58.9 |
E-value |
2.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960734|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_D11, 5' (692 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropica... 59 2e-08 sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN... 59 2e-08 sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN... 59 2e-08 sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN... 59 2e-08 sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=... 59 2e-08 sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=S... 59 2e-08 sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laev... 59 2e-08 sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laev... 59 2e-08 sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster ... 57 7e-08 sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus muscu... 55 3e-07 sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 ... 55 3e-07 sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapi... 55 4e-07 sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio r... 55 4e-07 sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio r... 55 4e-07 sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus l... 53 2e-06 sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 O... 47 7e-05 sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 O... 45 3e-04 sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=... 43 0.001 sp|Q717B4|TDPZ3_MOUSE TD and POZ domain-containing protein 3 OS=... 40 0.012 sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=... 39 0.026 sp|Q6PCX9|TRI37_MOUSE Tripartite motif-containing protein 37 OS=... 36 0.22 sp|O94972|TRI37_HUMAN Tripartite motif-containing protein 37 OS=... 36 0.22 sp|Q6YCH2|TDPZ4_MOUSE TD and POZ domain-containing protein 4 OS=... 33 1.4 sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 ... 32 2.5 sp|Q90751|BMP2_CHICK Bone morphogenetic protein 2 (Fragment) OS=... 32 3.2 sp|Q8C0V1|CCD79_MOUSE Coiled-coil domain-containing protein 79 O... 30 9.4
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=2 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-B PE=2 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1 Length = 374
Score = 58.9 bits (141), Expect = 2e-08 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ I S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ G +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSILNAKGEE--------TKAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2 Length = 829
Score = 57.4 bits (137), Expect = 7e-08 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ + S TFS G +W + P G + E + Y+S Sbjct: 483 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKD-YLS 540
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ ++L+ +A+ES +G WG+K+F Sbjct: 541 LYLLLVSCNKSEVRAKFKFSILNAKREET--------KAMESQRAYRFVQGKDWGFKKFI 592
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L D+L+I C V VV S Sbjct: 593 RRDFLLDEANGLLPEDKLTIFCEVSVVADS 622
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=2 Length = 392
Score = 55.5 bits (132), Expect = 3e-07 Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 6/150 (4%) Frame = +2
Query: 254 ETINGSHHFTIQGYSLAKGMGVGKYISSDTFSVGG---YQWAVYFYPDGKNPEDQSIYVS 424 + + S+ +TI +S + +G+ + S TFS G +W + P G + E + Y+S Sbjct: 28 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKD-YLS 85
Query: 425 VFIALAS-EGTDVRALFELTLLDQSGRGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFF 601 +++ L S ++VRA F+ +LL+ +A+ES +G WG+K+F Sbjct: 86 LYLLLVSCPKSEVRAKFKFSLLNDKREET--------KAMESQRAYRFVQGKDWGFKKFI 137
Query: 602 RRTGL--ETSDYLKNDRLSISCTVGVVVSS 685 RR L E + L +D+L++ C V VV S Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSVVQDS 167
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TWM0 |
Definition |
tr|A9TWM0|A9TWM0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
148 |
Score (bit) |
278.0 |
E-value |
2.0e-73 |
Report |
|