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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960740
Clone id TST39A01NGRL0008_D17
Library
Length 420
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_D17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
ATTAGACCTAGCCGTCCAGCACACGGGGTGTACCCTGTCTTTCATACTCCTAGGCACTCC
TCATCTCGCATCGGGCGATTGAGCTCGGGAGATCGAGGCGACCACGACCGACACACAGGG
CCACACTGCCTCGACAGGAGACTCGCAGCAGAGGATCAGAGGCATTCTGACAGGACACCC
ATATTGTCTTTGAGGGCCTATTCTACATTTTCACATTTCACATTTCAGACTTGCTTTCAG
TATTCATTTTTTACTTTGCTCTACTTTGTATGTACTTGTACCTCACACCTTGTATTAGAT
TCACCACTTTGCATCTGAGGGTCTCATAGGTCATTTTGGCCTTGTGGAAGACCGTTAGTA
TATATCTCACATCTCCTTATCTCACTCAACACACTGCGCGCGCTCTCTCTCTCTCTCTCT
■■Homology search results ■■ -
sp_hit_id P60413
Definition sp|P60413|KR10C_HUMAN Keratin-associated protein 10-12 OS=Homo sapiens
Align length 29
Score (bit) 32.3
E-value 0.78
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960740|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D17, 5'
         (420 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P60413|KR10C_HUMAN Keratin-associated protein 10-12 OS=Homo s...    32   0.78 
sp|P60371|KR106_HUMAN Keratin-associated protein 10-6 OS=Homo sa...    32   1.3  
sp|Q80V94|AP4E1_MOUSE AP-4 complex subunit epsilon-1 OS=Mus musc...    31   2.2  
sp|P42864|GPT_LEIAM UDP-N-acetylglucosamine--dolichyl-phosphate ...    30   3.8  
sp|P48236|YG3L_YEAST Uncharacterized membrane protein YGR149W OS...    30   3.9  
sp|Q86IX2|DOPP1_DICDI Dolichyldiphosphatase 1 OS=Dictyostelium d...    30   4.9  
sp|P15958|NU5C_VICFA NAD(P)H-quinone oxidoreductase subunit 5, c...    29   6.4  
sp|P15966|VASS_BPFR Assembly protein OS=Enterobacteria phage fr ...    29   8.4  

>sp|P60413|KR10C_HUMAN Keratin-associated protein 10-12 OS=Homo
           sapiens GN=KRTAP10-12 PE=1 SV=1
          Length = 245

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 150 CCESPVEAVWPCVSVVVASISRAQSPDAR 64
           CCE P  A  PC+S+V   +SR  SP  R
Sbjct: 36  CCEPPCCAPAPCLSLVCTPVSRVSSPCCR 64


>sp|P60371|KR106_HUMAN Keratin-associated protein 10-6 OS=Homo
           sapiens GN=KRTAP10-6 PE=2 SV=1
          Length = 365

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 150 CCESPVEAVWPCVSVVVASISRAQSP 73
           CCE P  A  PC+S+V   +SR  SP
Sbjct: 41  CCEPPCCAPAPCLSLVCTPVSRVSSP 66


>sp|Q80V94|AP4E1_MOUSE AP-4 complex subunit epsilon-1 OS=Mus musculus
            GN=Ap4e1 PE=2 SV=2
          Length = 1122

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 261  LLCMYLYLTPCIRFTTLHLRVS*VILALWKTVSIYLTSPYLTQHTARALSLS 416
            L C  L  TPC+    LH RV    +ALW   S  + S YL+ H  + +  S
Sbjct: 1075 LACKLLPSTPCV----LHCRVHADAVALWFRSSSSVLSDYLSCHCQKVMQTS 1122


>sp|P42864|GPT_LEIAM UDP-N-acetylglucosamine--dolichyl-phosphate
           N-acetylglucosaminephosphotransferase OS=Leishmania
           amazonensis GN=NAGT PE=3 SV=1
          Length = 466

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -3

Query: 370 VRYILTVFHKAKMTYETLRCKVVNLIQGVRYKYIQS 263
           + Y+    H+AK+T+  L+C+V+  + G   +Y+ S
Sbjct: 423 ILYLFGDMHEAKLTWAILKCQVIACVLGFVVRYVLS 458


>sp|P48236|YG3L_YEAST Uncharacterized membrane protein YGR149W
           OS=Saccharomyces cerevisiae GN=YGR149W PE=1 SV=1
          Length = 432

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 208 FSHFTFQTCFQYSFFTLLYFVCTCTSHLVLDS 303
           +S+  FQ+CF ++F TL + V T  + LV+ S
Sbjct: 185 YSYSLFQSCFAFTFGTLCFAVITWRNSLVIHS 216


>sp|Q86IX2|DOPP1_DICDI Dolichyldiphosphatase 1 OS=Dictyostelium
           discoideum GN=dolpp1 PE=3 SV=1
          Length = 229

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 237 SVFIFYFALLCMYLYLTPCIRFTTLHLRVS*VILALWKTVSIYLTSPYLTQHTAR 401
           S F+F+FA+L    YL   IRF +  L +  V    +    +  +  +L  HTA+
Sbjct: 99  SQFMFFFAVLMTLFYLKKRIRFGSKILPIISVTFLFFLAAGVAYSRVHLYYHTAK 153


>sp|P15958|NU5C_VICFA NAD(P)H-quinone oxidoreductase subunit 5,
           chloroplastic OS=Vicia faba GN=ndhF PE=3 SV=1
          Length = 746

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 192 EGLFYIFTFHISDLLSVFIFYFALLCMYLYLTP 290
           E + Y+    IS  +  F+  F L+C Y+YL P
Sbjct: 714 EAIKYVGGGRISSYIFFFVLIFLLICYYIYLFP 746


>sp|P15966|VASS_BPFR Assembly protein OS=Enterobacteria phage fr
           GN=A PE=2 SV=2
          Length = 393

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +3

Query: 276 LYLTPCIRFTTLHLRVS*V---ILALWKTVSIYLTSPYLTQHTARALSL 413
           +Y    +R  T  +++S V   + ++W T  +Y+ SP+   HT  AL+L
Sbjct: 338 IYGWDTVRPATAKVQISAVHRGVQSVWPTTGVYVKSPFSMVHTLDALAL 386
tr_hit_id A2AX81
Definition tr|A2AX81|A2AX81_TRICA Gustatory receptor OS=Tribolium castaneum
Align length 70
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960740|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D17, 5'
         (420 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2AX81|A2AX81_TRICA Gustatory receptor OS=Tribolium castaneum...    36   1.1  
tr|Q38FC4|Q38FC4_9TRYP Putative uncharacterized protein OS=Trypa...    35   1.4  
tr|Q16QH9|Q16QH9_AEDAE Cytochrome B561 OS=Aedes aegypti GN=AAEL0...    34   4.1  
tr|Q1NCH4|Q1NCH4_9SPHN Putative NAD-specific glutamate dehydroge...    33   5.4  
tr|Q7Q9I3|Q7Q9I3_ANOGA AGAP005222-PB OS=Anopheles gambiae GN=AGA...    33   5.4  
tr|A7UTA7|A7UTA7_ANOGA AGAP005222-PA OS=Anopheles gambiae GN=AGA...    33   5.4  
tr|B4F2M6|B4F2M6_PROMH Pirin-like protein OS=Proteus mirabilis (...    33   5.4  
tr|B0E663|B0E663_ENTDI Putative uncharacterized protein OS=Entam...    33   5.4  
tr|A9CTM6|A9CTM6_9MICR Receptor protein-tyrosine kinase ERBB-2 O...    33   7.0  
tr|Q7QEG9|Q7QEG9_ANOGA AGAP000657-PA (Fragment) OS=Anopheles gam...    33   9.2  
tr|B3JHN8|B3JHN8_9BACE Putative uncharacterized protein OS=Bacte...    33   9.2  
tr|B0ECI2|B0ECI2_ENTDI Putative uncharacterized protein OS=Entam...    33   9.2  
tr|A8B459|A8B459_GIALA Putative uncharacterized protein OS=Giard...    33   9.2  

>tr|A2AX81|A2AX81_TRICA Gustatory receptor OS=Tribolium castaneum
           GN=gr19 PE=4 SV=1
          Length = 355

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
 Frame = +3

Query: 180 HIVFEGLFYIFTFHISDLLSVFIFYFA---LLCMYLYLTPCIRFTTLHLRVS*VILALWK 350
           H++F   F IFT H+  LL ++ FY A   LLC+Y +    I F T H   +  +  L  
Sbjct: 265 HLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPT-HFYCAFSLYPLKS 323

Query: 351 TVSIYLTSPY 380
           T  + +  P+
Sbjct: 324 TFYLNVVRPF 333


>tr|Q38FC4|Q38FC4_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb09.160.2730 PE=4 SV=1
          Length = 159

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 240 VFIFYFALLCMYLYLTPCIRFTTLHLRVS*VILALWKTVSIYLTSPYLTQH 392
           +FIF+F L+C Y  + P +R   ++   S    + +  VS YLT P  T H
Sbjct: 40  LFIFFFLLVCFYFLIPPSLRHVRMYSHFS---FSFFFFVSFYLTHPPPTVH 87


>tr|Q16QH9|Q16QH9_AEDAE Cytochrome B561 OS=Aedes aegypti
           GN=AAEL011281 PE=4 SV=1
          Length = 255

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = +1

Query: 178 PILSLRAYSTFSHFTFQTCFQYSFFTLLYFVCTCTSHLVLDSPLCI*GSHRSFWPCGRPL 357
           P+L +  Y T S F+           LLY +C C SHL++   LC    H  F  C  P 
Sbjct: 69  PVLMVGGYITLSGFSI----------LLYRICRCCSHLIV--KLC----HTFFHACSIPC 112

Query: 358 VYISHLLI 381
           + I  L +
Sbjct: 113 IVIGFLAV 120


>tr|Q1NCH4|Q1NCH4_9SPHN Putative NAD-specific glutamate
           dehydrogenase encoded in antisense gene pair with dnaKJ
           OS=Sphingomonas sp. SKA58 GN=SKA58_12517 PE=4 SV=1
          Length = 1021

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = +1

Query: 22  HGVYPVFHTPRHS-----SSRIG-RLSSGDRGDHDRHTGPHCLDRRLAAEDQRHSDRTPI 183
           H    + H  RH      S RIG RL  GDRG    H G H   R  A  ++RH ++  +
Sbjct: 576 HFTLALEHADRHGLLIVISGRIGLRLLGGDRGVAVDHAGEHATQRLDAKAERRHVEQQHV 635

Query: 184 LSL 192
           L +
Sbjct: 636 LDV 638


>tr|Q7Q9I3|Q7Q9I3_ANOGA AGAP005222-PB OS=Anopheles gambiae
           GN=AGAP005222 PE=4 SV=2
          Length = 256

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = +1

Query: 178 PILSLRAYSTFSHFTFQTCFQYSFFTLLYFVCTCTSHLVLDSPLCI*GSHRSFWPCGRPL 357
           P+L +  Y T S F+           LLY +C C SHL++   LC    H  F  C  P 
Sbjct: 70  PVLMIGGYITLSGFSI----------LLYRICRCCSHLIV--KLC----HTFFHACSIPC 113

Query: 358 VYISHLLI 381
           + I  + +
Sbjct: 114 IVIGFMAV 121


>tr|A7UTA7|A7UTA7_ANOGA AGAP005222-PA OS=Anopheles gambiae
           GN=AGAP005222 PE=4 SV=1
          Length = 286

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = +1

Query: 178 PILSLRAYSTFSHFTFQTCFQYSFFTLLYFVCTCTSHLVLDSPLCI*GSHRSFWPCGRPL 357
           P+L +  Y T S F+           LLY +C C SHL++   LC    H  F  C  P 
Sbjct: 100 PVLMIGGYITLSGFSI----------LLYRICRCCSHLIV--KLC----HTFFHACSIPC 143

Query: 358 VYISHLLI 381
           + I  + +
Sbjct: 144 IVIGFMAV 151


>tr|B4F2M6|B4F2M6_PROMH Pirin-like protein OS=Proteus mirabilis
           (strain HI4320) GN=PMI3459 PE=4 SV=1
          Length = 289

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 41  FILLGTPHLASGD*AREIEATTTDTQGHTASTGDSQQRIRGILTGHP 181
           F++ G  HL + D  R+ E    DT G T + G     I  ILTG P
Sbjct: 208 FVVKGAIHLNNSDIVRQHEIAILDTHGDTLTLGSMGDAIVLILTGEP 254


>tr|B0E663|B0E663_ENTDI Putative uncharacterized protein
           OS=Entamoeba dispar SAW760 GN=EDI_102740 PE=4 SV=1
          Length = 106

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 180 HIVFEGLFYIFTFHISDLLSVFIFYFALLCMYLY 281
           +I++    YI   +I  +LS++IF+F  LC+Y+Y
Sbjct: 34  YILYILCIYILFIYIIYILSIYIFFFITLCLYVY 67


>tr|A9CTM6|A9CTM6_9MICR Receptor protein-tyrosine kinase ERBB-2
           OS=Enterocytozoon bieneusi H348 GN=EBI_22529 PE=4 SV=1
          Length = 313

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = +3

Query: 183 IVFEGLFYIFTFHISDLLSVFIFYFALLCMYLYLTPCIRFTTLHLRVS*VILALWKTVSI 362
           I F  L+YI  +       VF  +  +  +YLY    I F   H ++  VIL L   ++ 
Sbjct: 178 IYFPELYYILNY------IVFTLFVGIFILYLYKMLIIDFNYHHNKIFCVILVLLLQINY 231

Query: 363 YLTSPYLTQHTAR 401
            LT+ Y    T R
Sbjct: 232 ILTTMYYKNKTLR 244


>tr|Q7QEG9|Q7QEG9_ANOGA AGAP000657-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP000657 PE=4 SV=4
          Length = 308

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 199 YSTFSHFTFQTCFQYSFFTLLYFVCTCTSHLV 294
           Y  + H++F TC    F+   + +C CT HL+
Sbjct: 219 YQLYRHYSFSTCSMECFWKTQHQLCNCTHHLM 250