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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960742
Clone id TST39A01NGRL0008_D19
Library
Length 625
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_D19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AAACGATGGATCGATCCCTCATGTCCAAGCTGGAGGATTTCACCCAGCTCAAGCCAGCTG
CAGCCTTCGGCACCCATCTTCACAAGTCAGATGTGAAGTTCATTGACAGGTTCTTGAGAG
CGCCTCCTTGGAATGGTTGTTTTCTATGTTGGAGCTTGCACTCGTTTTCATCGTCTTGTC
GTGGAATCTCATGGAGTATATGTGGTTTAAATAGAAGAGGCAGTCAAATGCCTTCTGCCT
TAGAAAAGGACAGGCATCAAAATGGAAGCTGGCAAGTGCATGCGTATGGAGATGAACTCA
TGTCTCAAGCAGAGGCTGTTGTTCTTGGAACGGCTACATCAGAACCAGAGTACAAGGCAA
TTCCAGACTTAGATTACTTACAGGAGCTTCTTGCAATTCAACAGCAGGGTCCAACAGCCA
TTGGGTTTTTTGGGACAAGGAATATGGGCTTTACGCATCAGCAACTTATTGAAGTTCTTA
GTTACGCCATGGTCATTACGAAAAATCACGTTTTTACGTCTGGAGCCTCTGGCACAAATG
CTGCTGTTATTAGGGGAGCATTAAGAGCTGAGAGGCCCGATCTTCTGACAGTGATCTTGC
CACAGTCTCTGAAAAAGCAACCTCC
■■Homology search results ■■ -
sp_hit_id P53717
Definition sp|P53717|YN82_YEAST Putative uncharacterized protein YNR005C OS=Saccharomyces cerevisiae
Align length 74
Score (bit) 31.2
E-value 4.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960742|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D19, 5'
         (625 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53717|YN82_YEAST Putative uncharacterized protein YNR005C OS...    31   4.5  
sp|Q32KT7|CJ120_BOVIN Uncharacterized protein C10orf120 homolog ...    31   5.9  
sp|Q6DDU5|SMAP_XENLA Small acidic protein OS=Xenopus laevis GN=s...    30   7.7  
sp|A4QSX4|EIF3C_MAGGR Eukaryotic translation initiation factor 3...    30   7.7  

>sp|P53717|YN82_YEAST Putative uncharacterized protein YNR005C
           OS=Saccharomyces cerevisiae GN=YNR005C PE=5 SV=1
          Length = 134

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = -2

Query: 369 SLELPCTLVLM*PFQEQQPLLET*VHLHTHALASFHFDACPFLRQKAFDCLFYLNHIYSM 190
           SL++ C++V M    EQ  L++      TH L SF  D   F        LF++  I S+
Sbjct: 14  SLKMTCSMVSMNSL-EQISLIKGVPPFFTHILVSFQEDNWVFGLSAVLRILFFIQRIESL 72

Query: 189 RFHDKTMKTSASSN 148
            F    + TS  SN
Sbjct: 73  GFTLLDLNTSEISN 86


>sp|Q32KT7|CJ120_BOVIN Uncharacterized protein C10orf120 homolog
           OS=Bos taurus PE=2 SV=1
          Length = 343

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
 Frame = -3

Query: 608 RLWQDHCQKIGPLXXXXXXXXXSICARGSRRKNVIFRNDHGVTKNF-NKLLMRKAHIPCP 432
           R W++ C KIG            +   G   KN I      ++ +F NK  +      CP
Sbjct: 3   REWENGCPKIGKQRARDSRAQERMTTEGKLNKNGIPARVFNISDSFLNKESLSSQGDVCP 62

Query: 431 KKPNGCWT 408
             P G WT
Sbjct: 63  ASPLGIWT 70


>sp|Q6DDU5|SMAP_XENLA Small acidic protein OS=Xenopus laevis GN=smap
           PE=2 SV=1
          Length = 188

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 213 RRGSQMPSALEKDRHQNGSWQVHAYGDELMSQAEAVVLGTATSE 344
           +RGS+ P+A  ++   NGSW+    G+E   Q    ++G    E
Sbjct: 9   QRGSKRPAARRENESDNGSWEQADLGNEERKQKFLRLMGAGKKE 52


>sp|A4QSX4|EIF3C_MAGGR Eukaryotic translation initiation factor 3
           subunit C OS=Magnaporthe grisea GN=NIP1 PE=3 SV=1
          Length = 865

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 291 DELMSQAEAVVLGTATSEPEYKAIPDL-DYLQELLAIQQQGPTAIGFFGTRNMGFTHQQL 467
           D+L  QAE +  GT   +   K+I DL D++ E LA Q+  P  +     R +    Q++
Sbjct: 121 DKLNRQAEKLRTGTTAPKMYIKSIADLEDFMNETLAKQKVTPKKMNATNARGLNAVKQRI 180
tr_hit_id B8A7H0
Definition tr|B8A7H0|B8A7H0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 186
Score (bit) 187.0
E-value 3.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960742|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D19, 5'
         (625 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8A7H0|B8A7H0_ORYSI Putative uncharacterized protein OS=Oryza...   187   3e-46
tr|Q5ZB95|Q5ZB95_ORYSJ Cyanobacteria-specific protein-like (Os01...   187   6e-46
tr|B6T6T8|B6T6T8_MAIZE Cysteine sulfinate desulfinase/cysteine d...   185   2e-45
tr|B6U7J5|B6U7J5_MAIZE Cysteine sulfinate desulfinase/cysteine d...   184   3e-45
tr|B4G1B7|B4G1B7_MAIZE Putative uncharacterized protein OS=Zea m...   184   3e-45
tr|B4FYT0|B4FYT0_MAIZE Putative uncharacterized protein OS=Zea m...   184   3e-45
tr|A2ZSP8|A2ZSP8_ORYSJ Putative uncharacterized protein OS=Oryza...   179   2e-43
tr|A9SXR5|A9SXR5_PHYPA Predicted protein (Fragment) OS=Physcomit...   178   3e-43
tr|A5AQ16|A5AQ16_VITVI Putative uncharacterized protein (Chromos...   172   1e-41
tr|A9NNF1|A9NNF1_PICSI Putative uncharacterized protein OS=Picea...   171   2e-41
tr|O80564|O80564_ARATH Putative uncharacterized protein At2g4394...   166   8e-40
tr|Q9M1Y7|Q9M1Y7_ARATH Putative uncharacterized protein F24G16.1...   166   1e-39
tr|Q8LF24|Q8LF24_ARATH Putative uncharacterized protein OS=Arabi...   166   1e-39
tr|A7QUZ9|A7QUZ9_VITVI Chromosome undetermined scaffold_183, who...   163   9e-39
tr|A5BB89|A5BB89_VITVI Putative uncharacterized protein OS=Vitis...   162   1e-38
tr|A4RXK1|A4RXK1_OSTLU Predicted protein OS=Ostreococcus lucimar...   151   3e-35
tr|A8J3N4|A8J3N4_CHLRE Predicted protein OS=Chlamydomonas reinha...   135   3e-30
tr|A9T1R1|A9T1R1_PHYPA Predicted protein OS=Physcomitrella paten...   120   9e-26
tr|A9BKD3|A9BKD3_9CRYP Putative uncharacterized protein OS=Crypt...   115   3e-24
tr|B7G6N1|B7G6N1_PHATR Predicted protein (Fragment) OS=Phaeodact...   112   2e-23
tr|Q110Z5|Q110Z5_TRIEI Putative uncharacterized protein OS=Trich...   108   2e-22
tr|Q98RQ6|Q98RQ6_GUITH Putative uncharacterized protein orf228 O...   108   3e-22
tr|P74478|P74478_SYNY3 Slr1926 protein OS=Synechocystis sp. (str...   104   4e-21
tr|Q4BVI8|Q4BVI8_CROWT Putative uncharacterized protein OS=Croco...   103   6e-21
tr|B8C532|B8C532_THAPS Putative uncharacterized protein OS=Thala...   103   6e-21
tr|B7JYJ6|B7JYJ6_SYNP8 Putative uncharacterized protein OS=Synec...   103   8e-21
tr|B4BV64|B4BV64_9CHRO Putative uncharacterized protein OS=Cyano...   103   8e-21
tr|B1WRA8|B1WRA8_CYAA5 Putative uncharacterized protein OS=Cyano...   102   1e-20
tr|A3IKD7|A3IKD7_9CHRO Putative uncharacterized protein OS=Cyano...   102   1e-20
tr|B7K878|B7K878_9CHRO Putative uncharacterized protein OS=Cyano...   102   2e-20

>tr|B8A7H0|B8A7H0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01750 PE=4 SV=1
          Length = 285

 Score =  187 bits (476), Expect = 3e-46
 Identities = 112/186 (60%), Positives = 128/186 (68%), Gaps = 29/186 (15%)
 Frame = +3

Query: 153 SLHSFSSSCRGISWSICGLNRRG-----SQMPSA-----------LEKDRHQNGSWQVHA 284
           SL S SSSC  +S    G+ R G       +P A           + +D H++G  +   
Sbjct: 28  SLSSSSSSCCYLSMCGRGVLRGGCARMREPLPPAPIGLDRFLCGYMRRDGHEDGE-RSQG 86

Query: 285 YGDELM------------SQAEAVVLGTAT-SEPEYKAIPDLDYLQELLAIQQQGPTAIG 425
             D LM            +Q E +V GTAT + PEYK+IPDLDYLQELLAIQQQGP AIG
Sbjct: 87  IEDSLMFGPDDDNGSNIPTQVETLVRGTATVATPEYKSIPDLDYLQELLAIQQQGPRAIG 146

Query: 426 FFGTRNMGFTHQQLIEVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQ 605
           FFGTRNMGF HQQLIE+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQ
Sbjct: 147 FFGTRNMGFMHQQLIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQ 206

Query: 606 SLKKQP 623
           SLKKQP
Sbjct: 207 SLKKQP 212


>tr|Q5ZB95|Q5ZB95_ORYSJ Cyanobacteria-specific protein-like
           (Os01g0338600 protein) OS=Oryza sativa subsp. japonica
           GN=B1088D01.9 PE=4 SV=1
          Length = 283

 Score =  187 bits (474), Expect = 6e-46
 Identities = 94/113 (83%), Positives = 103/113 (91%), Gaps = 1/113 (0%)
 Frame = +3

Query: 288 GDELMSQAEAVVLGTAT-SEPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQ 464
           G  + +Q E +V GTAT + PEYK+IPDLDYLQELLAIQQQGP AIGFFGTRNMGF HQQ
Sbjct: 98  GSNIPTQVETLVRGTATVATPEYKSIPDLDYLQELLAIQQQGPRAIGFFGTRNMGFMHQQ 157

Query: 465 LIEVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQP 623
           LIE+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQSLKKQP
Sbjct: 158 LIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP 210


>tr|B6T6T8|B6T6T8_MAIZE Cysteine sulfinate desulfinase/cysteine
           desulfurase and related enzymes OS=Zea mays PE=2 SV=1
          Length = 279

 Score =  185 bits (470), Expect = 2e-45
 Identities = 94/113 (83%), Positives = 103/113 (91%), Gaps = 1/113 (0%)
 Frame = +3

Query: 288 GDELMSQAEAVVLGTA-TSEPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQ 464
           G ++ +Q E +V GTA  +EPEYKA PDLDYLQELLAIQQQGP AIGFFGTRNMGF HQQ
Sbjct: 94  GVKIPTQVETLVKGTAMVAEPEYKASPDLDYLQELLAIQQQGPRAIGFFGTRNMGFMHQQ 153

Query: 465 LIEVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQP 623
           LIE+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQSLKKQP
Sbjct: 154 LIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP 206


>tr|B6U7J5|B6U7J5_MAIZE Cysteine sulfinate desulfinase/cysteine
           desulfurase and related enzymes OS=Zea mays PE=2 SV=1
          Length = 279

 Score =  184 bits (468), Expect = 3e-45
 Identities = 93/113 (82%), Positives = 103/113 (91%), Gaps = 1/113 (0%)
 Frame = +3

Query: 288 GDELMSQAEAVVLGTAT-SEPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQ 464
           G ++ +Q E +V GTA  +EPEYK IPD+DYLQELLAIQQQGP AIGFFGTRNMGF HQQ
Sbjct: 94  GVKIPTQVETLVKGTAAVAEPEYKQIPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQQ 153

Query: 465 LIEVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQP 623
           LIE+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQSLKKQP
Sbjct: 154 LIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP 206


>tr|B4G1B7|B4G1B7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 279

 Score =  184 bits (468), Expect = 3e-45
 Identities = 93/113 (82%), Positives = 103/113 (91%), Gaps = 1/113 (0%)
 Frame = +3

Query: 288 GDELMSQAEAVVLGTAT-SEPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQ 464
           G ++ +Q E +V GTA  +EPEYK IPD+DYLQELLAIQQQGP AIGFFGTRNMGF HQQ
Sbjct: 94  GVKIPTQVETLVKGTAAVAEPEYKQIPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQQ 153

Query: 465 LIEVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQP 623
           LIE+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQSLKKQP
Sbjct: 154 LIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP 206


>tr|B4FYT0|B4FYT0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 212

 Score =  184 bits (468), Expect = 3e-45
 Identities = 93/113 (82%), Positives = 103/113 (91%), Gaps = 1/113 (0%)
 Frame = +3

Query: 288 GDELMSQAEAVVLGTAT-SEPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQ 464
           G ++ +Q E +V GTA  +EPEYK IPD+DYLQELLAIQQQGP AIGFFGTRNMGF HQQ
Sbjct: 27  GVKIPTQVETLVKGTAAVAEPEYKQIPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQQ 86

Query: 465 LIEVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQP 623
           LIE+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQSLKKQP
Sbjct: 87  LIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP 139


>tr|A2ZSP8|A2ZSP8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001570 PE=4 SV=1
          Length = 223

 Score =  179 bits (453), Expect = 2e-43
 Identities = 94/123 (76%), Positives = 103/123 (83%), Gaps = 11/123 (8%)
 Frame = +3

Query: 288 GDELMSQAEAVVLGTAT-SEPEYKAIPDLDYLQ----------ELLAIQQQGPTAIGFFG 434
           G  + +Q E +V GTAT + PEYK+IPDLDYLQ          ELLAIQQQGP AIGFFG
Sbjct: 28  GSNIPTQVETLVRGTATVATPEYKSIPDLDYLQNDLIHLVVMQELLAIQQQGPRAIGFFG 87

Query: 435 TRNMGFTHQQLIEVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLK 614
           TRNMGF HQQLIE+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQSLK
Sbjct: 88  TRNMGFMHQQLIEILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 147

Query: 615 KQP 623
           KQP
Sbjct: 148 KQP 150


>tr|A9SXR5|A9SXR5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_137063 PE=4 SV=1
          Length = 182

 Score =  178 bits (451), Expect = 3e-43
 Identities = 88/107 (82%), Positives = 95/107 (88%)
 Frame = +3

Query: 303 SQAEAVVLGTATSEPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQLIEVLS 482
           +QAE V  GT T + +YK  PDLDYLQELLAIQQ GP AIGFFGTRNMGF HQQLIE+LS
Sbjct: 3   TQAETVTQGTQTVQTDYKPTPDLDYLQELLAIQQNGPRAIGFFGTRNMGFMHQQLIEILS 62

Query: 483 YAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQP 623
           YAMVIT NH++TSGA+GTNAAVIRGALRAERPDLLTVILPQSLKKQP
Sbjct: 63  YAMVITNNHIYTSGAAGTNAAVIRGALRAERPDLLTVILPQSLKKQP 109


>tr|A5AQ16|A5AQ16_VITVI Putative uncharacterized protein (Chromosome
           chr5 scaffold_72, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00034756001 PE=4 SV=1
          Length = 213

 Score =  172 bits (436), Expect = 1e-41
 Identities = 86/111 (77%), Positives = 101/111 (90%), Gaps = 1/111 (0%)
 Frame = +3

Query: 294 ELMSQAEAVVLGT-ATSEPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQLI 470
           ++ +QA+++V G+ A    E+K +PD+DYLQELLAIQQQGP AIGFFGTRNMGFTHQ+LI
Sbjct: 30  QVPTQAQSLVEGSGAVLVSEFKPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFTHQELI 89

Query: 471 EVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQP 623
           E+LSYAMVITKNH+FTSGASGTNAAVIRGALRAE+P+LLTVILPQSLK QP
Sbjct: 90  EILSYAMVITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLKMQP 140


>tr|A9NNF1|A9NNF1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 272

 Score =  171 bits (434), Expect = 2e-41
 Identities = 88/110 (80%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
 Frame = +3

Query: 294 ELMSQAEAVVLGTATS-EPEYKAIPDLDYLQELLAIQQQGPTAIGFFGTRNMGFTHQQLI 470
           ++ SQAE+V  G  +    EYK IPDLDYLQELLAIQQQGP AIGFFGTRNMG+ HQQLI
Sbjct: 89  QIPSQAESVTEGAGSVLVSEYKPIPDLDYLQELLAIQQQGPRAIGFFGTRNMGYMHQQLI 148

Query: 471 EVLSYAMVITKNHVFTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQ 620
           E+LSYAMVITKNH++TSGASGTNAAVIRGALRAE+PDLLTVILPQSLK Q
Sbjct: 149 EILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPDLLTVILPQSLKMQ 198