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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960746
Clone id TST39A01NGRL0008_D23
Library
Length 485
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_D23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GGCAAATCCACACTACTATGTGAGCTTGCCTTCGCGGCAAAGCATGCCGTCTCCTTCCGC
AGATCTCACCGCGCGGCTTGCCTCAACCTTGCGCCATCGAGACACACATACTCCTACGCC
CAGATTGCACCCTCGAATAGCTGCCTCAAGAATATCACCATGACAGTGATGAATACTACG
TGGACCACGTGTATGAAGGTGCTTTGCTGCGTTACTATCCTGAGAAAACGATGATATCTC
ACTTGCACAATAAGATCGAGTTTACCGTTGCCATGCCTGTCTTCCTTGGATTTCAAGATT
TCATCTGCCCAGAGGTATGGCCAGCGGCCTTAAATGAGTTTCTTGCCTCAGCAGTCTCGG
TGTTTGTGAACACATACTGGCGCTCTCACATGCTTGCTGGCTGGTTTCACATCCTCCACG
GCTTCCATTGGAGTGATTACCTTTTTGTGCTTATCCTTTTTCATCTTGTCCGCTGCCCCA
GCCTC
■■Homology search results ■■ -
sp_hit_id Q61212
Definition sp|Q61212|NPY6R_MOUSE Neuropeptide Y receptor type 6 OS=Mus musculus
Align length 73
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960746|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D23, 5'
         (485 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q61212|NPY6R_MOUSE Neuropeptide Y receptor type 6 OS=Mus musc...    32   1.2  
sp|A7I4Y4|SEPS_METB6 O-phosphoseryl-tRNA(Cys) synthetase OS=Meth...    31   3.4  
sp|Q5ZXM0|HUTI_LEGPH Imidazolonepropionase OS=Legionella pneumop...    30   5.7  
sp|Q9PL60|Y248_CHLMU Uncharacterized protein TC_0248 OS=Chlamydi...    30   7.5  
sp|O27545|SEPS_METTH O-phosphoseryl-tRNA(Cys) synthetase OS=Meth...    30   7.5  
sp|Q9WZ22|LY41_THEMA Uncharacterized AIPM/Hcit synthase family t...    30   7.5  
sp|Q5EE38|ACD_MOUSE Adrenocortical dysplasia protein OS=Mus musc...    30   7.5  
sp|A5VFA5|HUTI_SPHWW Imidazolonepropionase OS=Sphingomonas witti...    29   9.8  
sp|O35565|FGF10_MOUSE Fibroblast growth factor 10 OS=Mus musculu...    29   9.8  
sp|Q8BGX1|F113B_MOUSE Protein FAM113B OS=Mus musculus GN=Fam113b...    29   9.8  

>sp|Q61212|NPY6R_MOUSE Neuropeptide Y receptor type 6 OS=Mus
           musculus GN=Npy6r PE=2 SV=1
          Length = 371

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
 Frame = +3

Query: 180 VDHVYEGALLRYYPEKTMIS------HLHNKIEFTVAMPVFLGFQDFICPEVWPAALNEF 341
           V H Y G +L +    T+        HL N+    +++P  +      C E+WP+ LN+ 
Sbjct: 148 VAHAYWGIILIWLISLTLSIPLFLSYHLTNEPFHNLSLPTDIYTHQVACVEIWPSKLNQL 207

Query: 342 LASAVSVFVNTYW 380
           L S  S+F+  Y+
Sbjct: 208 LFS-TSLFMLQYF 219


>sp|A7I4Y4|SEPS_METB6 O-phosphoseryl-tRNA(Cys) synthetase
           OS=Methanoregula boonei (strain 6A8) GN=sepS PE=3 SV=1
          Length = 550

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 24/73 (32%), Positives = 31/73 (42%)
 Frame = +3

Query: 258 EFTVAMPVFLGFQDFICPEVWPAALNEFLASAVSVFVNTYWRSHMLAGWFHILHGFHWSD 437
           E T  +   LG  D I   +  +   EF  S V     +  RSHM +GWF  L G  W  
Sbjct: 170 ELTHELAKVLGVDDGIVVHILDSVFPEF-RSLVPESSRSTLRSHMTSGWFMTL-GSLWER 227

Query: 438 YLFVLILFHLVRC 476
               + LF + RC
Sbjct: 228 TPLPIKLFSVDRC 240


>sp|Q5ZXM0|HUTI_LEGPH Imidazolonepropionase OS=Legionella
           pneumophila subsp. pneumophila (strain Philadelphia 1 /
           ATCC 33152 / DSM 7513) GN=hutI PE=3 SV=2
          Length = 403

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 291 FQDFICPEVWPAALNEFLASAVSVF 365
           + DF+C E+ PAA N  LA AV VF
Sbjct: 187 YVDFLCNEMLPAAKNMDLADAVDVF 211


>sp|Q9PL60|Y248_CHLMU Uncharacterized protein TC_0248 OS=Chlamydia
           muridarum GN=TC_0248 PE=3 SV=1
          Length = 601

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 240 HLHNKIEFTVAMPVFLGFQDFICPEVWPAALNE 338
           H H ++++T  + V +  QDF C + +PA L +
Sbjct: 470 HPHPRVQYTKPICVLINEQDFSCADFFPAILKD 502


>sp|O27545|SEPS_METTH O-phosphoseryl-tRNA(Cys) synthetase
           OS=Methanobacterium thermoautotrophicum GN=sepS PE=3
           SV=1
          Length = 532

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +3

Query: 372 TYWRSHMLAGWFHILHGFHWSDYLFVLILFHLVRC 476
           T  RSHM +GWF  L   H   Y   L LF + RC
Sbjct: 181 TTLRSHMTSGWFISLQNIH-DRYRMPLKLFSIDRC 214


>sp|Q9WZ22|LY41_THEMA Uncharacterized AIPM/Hcit synthase family
           transferase TM_0552 OS=Thermotoga maritima GN=TM_0552
           PE=3 SV=1
          Length = 538

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 425 EAVEDVKPASKHVRAPVCVHKHRD 354
           E +EDVK   KHV+AP+ +H H D
Sbjct: 188 EIIEDVK---KHVKAPLGIHAHND 208


>sp|Q5EE38|ACD_MOUSE Adrenocortical dysplasia protein OS=Mus
           musculus GN=Acd PE=2 SV=1
          Length = 416

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
 Frame = +2

Query: 14  YYVSLPSRQSMPSPSA-DLTARLASTLRHRDT-------HTPTPRLHPRIAASRISP 160
           +  S   RQ +P  SA +L +      RHRDT        TP+  LH ++  +R+SP
Sbjct: 340 FQCSFKKRQLLPRTSAQELCSVWEPPERHRDTSAFQYKYETPSASLHTQVQTARLSP 396


>sp|A5VFA5|HUTI_SPHWW Imidazolonepropionase OS=Sphingomonas
           wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=hutI
           PE=3 SV=1
          Length = 399

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 288 GFQDFICPEVWPAALNEFLASAVSVF 365
           G+ D +C E+ PAA  E LA AV  F
Sbjct: 185 GYVDLVCREMIPAAAREGLADAVDAF 210


>sp|O35565|FGF10_MOUSE Fibroblast growth factor 10 OS=Mus musculus
           GN=Fgf10 PE=2 SV=1
          Length = 209

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 249 CASEISSFSQDSNAAKHLHTRGPRSIHHCHGDI 151
           C+S  SSFS  S+A +H+     RS +H  GD+
Sbjct: 51  CSSSSSSFSSPSSAGRHV-----RSYNHLQGDV 78


>sp|Q8BGX1|F113B_MOUSE Protein FAM113B OS=Mus musculus GN=Fam113b
           PE=2 SV=1
          Length = 433

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +2

Query: 413 PPRLPLE*LPFCAYPFSSCPLPQP 484
           PP LP   LP    P   CPLPQP
Sbjct: 304 PPLLPSPGLPIRPPPLLGCPLPQP 327
tr_hit_id B8PJR4
Definition tr|B8PJR4|B8PJR4_9APHY Predicted protein OS=Postia placenta Mad-698-R
Align length 35
Score (bit) 37.0
E-value 0.48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960746|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_D23, 5'
         (485 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8PJR4|B8PJR4_9APHY Predicted protein OS=Postia placenta Mad-...    37   0.48 
tr|B8PA32|B8PA32_9APHY Predicted protein OS=Postia placenta Mad-...    37   0.48 
tr|A6UX49|A6UX49_META3 Putative uncharacterized protein OS=Metha...    35   2.4  
tr|Q4UKV2|Q4UKV2_RICFE Na+/proline symporter, signal transductio...    34   3.1  
tr|B3S9F0|B3S9F0_TRIAD Putative uncharacterized protein OS=Trich...    34   4.1  
tr|Q4QC86|Q4QC86_LEIMA Putative uncharacterized protein OS=Leish...    33   5.3  
tr|B2AAP9|B2AAP9_PODAN Predicted CDS Pa_1_4770 OS=Podospora anse...    33   5.3  
tr|B6JYW0|B6JYW0_SCHJP Putative uncharacterized protein OS=Schiz...    33   9.1  

>tr|B8PJR4|B8PJR4_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_93680 PE=4 SV=1
          Length = 896

 Score = 37.0 bits (84), Expect = 0.48
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = +2

Query: 29  PSRQSMPSPSADLTARLASTLRHRDTHTPTPRLHP 133
           PS  SMP PS D T+RL+  LR   T  P P L+P
Sbjct: 287 PSSISMPMPSTDETSRLSQILRSPTTQFPQPSLYP 321


>tr|B8PA32|B8PA32_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_105932 PE=4 SV=1
          Length = 823

 Score = 37.0 bits (84), Expect = 0.48
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = +2

Query: 29  PSRQSMPSPSADLTARLASTLRHRDTHTPTPRLHP 133
           PS  SMP PS D T+RL+  LR   T  P P L+P
Sbjct: 291 PSSISMPMPSTDETSRLSQILRSPTTQFPQPSLYP 325


>tr|A6UX49|A6UX49_META3 Putative uncharacterized protein
           OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
           BAA-1280) GN=Maeo_1495 PE=3 SV=1
          Length = 485

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
 Frame = +3

Query: 162 DSDEYYVDHVYEGALLRYYPEKTMISHLHN------KIEFTVAMPVFLGFQD----FICP 311
           D +EYY D V   A  RY P+ T I  + N       I++T ++ V++G  +    +I  
Sbjct: 301 DKNEYYADIVIYSAPSRYLPDITNIEEIQNIKNDLKNIKYTKSLTVWIGHSENPLNYIGS 360

Query: 312 EVW 320
           E+W
Sbjct: 361 EIW 363


>tr|Q4UKV2|Q4UKV2_RICFE Na+/proline symporter, signal transduction
           histidine kinase OS=Rickettsia felis GN=RF_0970 PE=3
           SV=1
          Length = 984

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 24/93 (25%), Positives = 45/93 (48%)
 Frame = +3

Query: 189 VYEGALLRYYPEKTMISHLHNKIEFTVAMPVFLGFQDFICPEVWPAALNEFLASAVSVFV 368
           V+   +   Y  K  +  + +K+  T+   + +    FIC  +WPA LN+ L   V  F+
Sbjct: 508 VFFSTIASIYTVKIFVLAVESKLLTTIFQIMLIMAALFICYPIWPARLNKKLKQMV-WFI 566

Query: 369 NTYWRSHMLAGWFHILHGFHWSDYLFVLILFHL 467
           + ++   + + +F I++ F  S     LI+F L
Sbjct: 567 SIFFLLTLCSSFFVIINNFATSQ----LIIFAL 595


>tr|B3S9F0|B3S9F0_TRIAD Putative uncharacterized protein
           OS=Trichoplax adhaerens GN=TRIADDRAFT_60882 PE=4 SV=1
          Length = 721

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 22/89 (24%), Positives = 37/89 (41%)
 Frame = +3

Query: 123 DCTLE*LPQEYHHDSDEYYVDHVYEGALLRYYPEKTMISHLHNKIEFTVAMPVFLGFQDF 302
           +C L+ +   YH   + YY  H Y  A+  Y     M   ++  I   +A       Q +
Sbjct: 582 NCNLD-VADSYHEIGNVYYSQHKYSNAISAYKKSLNMRLEIYENIHLDIAKSYHNLGQSY 640

Query: 303 ICPEVWPAALNEFLASAVSVFVNTYWRSH 389
                +P AL+ F  S ++ F+  Y  +H
Sbjct: 641 YQQSNYPDALSMFQES-LNAFIQLYDENH 668


>tr|Q4QC86|Q4QC86_LEIMA Putative uncharacterized protein
           OS=Leishmania major GN=LmjF21.1100 PE=4 SV=1
          Length = 700

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 20/77 (25%), Positives = 33/77 (42%)
 Frame = -3

Query: 480 WGSGQDEKG*AQKGNHSNGSRGGCETSQQACESASMCSQTPRLLRQETHLRPLAIPLGR* 301
           WG+G DE+    + + S   R GC  ++ A E A + +Q  R       + P  +  G  
Sbjct: 174 WGTGSDEEDEGDRASDSGVGRDGCADAEDAAEGAHLPAQKRRRREVFASMEPQLLVNGYY 233

Query: 300 NLEIQGRQAWQR*TRSY 250
             ++  R   +R  R Y
Sbjct: 234 RNDLLLRMRQRRRIRRY 250


>tr|B2AAP9|B2AAP9_PODAN Predicted CDS Pa_1_4770 OS=Podospora
           anserina PE=4 SV=1
          Length = 1299

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 23  SLPSRQSMPSPSADLTARLASTLRHRDTHTPTP 121
           SL +  S PSP+  L+ RL +TL +  T TPTP
Sbjct: 675 SLRTITSTPSPTTSLSTRLPTTLTYTSTTTPTP 707


>tr|B6JYW0|B6JYW0_SCHJP Putative uncharacterized protein
           OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_01781
           PE=4 SV=1
          Length = 346

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 162 HGDILEAAIRGCNLGVGVCVSRWRKVEASRAV 67
           HGD++E  +RGC++    C+ +W    A  A+
Sbjct: 276 HGDVMEVEMRGCSIWAVECIRKWMPKYALNAI 307