DK960755
Clone id TST39A01NGRL0008_E08
Library
Length 632
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_E08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CGGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTTTTTTTAGACTGCAA
GGCCATTTTTTTTATTCATAATACCATATATAGTGAAATGAAAATGACGTAGGTCGATAT
GCAGCCACATTTTGAACCCATCTCATATAGCCGAGATGAAAAGCGACATTACATACAAAC
ACAAGATCATGTCAAAAACAAGCAAGGAGCAAGTTGCTTAGAAGAGGCCATGTTTCTTCT
TCCTGCGCCCTCCTTCCCCATCACTTTCGCTGCTGCTGGAGCTGCTGTCATCGTCGCCAC
CCTTCATCTTGTGTTTCATCTTCTCAATGGGGCCTTCATGGTGGGGTGGGGGCGGCTCAT
GGGCATGGGCAGGTGGAGCCCCACCATGGTGGTGCTGCTGCTGCTCCAGCCCACCGTAAC
CTGCATGAACAGGGGGTGGTCCTGCATGCATCTGTCCCGGGTGCTCATGCTGATCATAGG
AGGCCGCGGCCACATGGGGGGGCACCCCACCATGATGCTCGCCACCACCACCGTGATGGC
CAGGATCATAGTCTCCTGCATATTGCGGTGGTGGGTGAGCTGGGTGCTCTTCTTCTTTGC
GATGACCCCCCATGTGCAGCATCTCGCCTATC
■■Homology search results ■■ -
sp_hit_id Q69ZH9
Definition sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus musculus
Align length 33
Score (bit) 31.2
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960755|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_E08, 5'
(581 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus mu... 31 3.9
sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HS... 31 5.1

>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus
musculus GN=Arhgap23 PE=2 SV=2
Length = 1483

Score = 31.2 bits (69), Expect = 3.9
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3

Query: 474 VASIMVGCPPM-WPRPPMISMSTRDRCMQDHPL 379
VA +VG PP PRPP + + RD C PL
Sbjct: 4 VAFCLVGIPPRPEPRPPQLPLGPRDGCSSGRPL 36


>sp|Q5QA93|HSV2_PICAN SVP1-like protein 2 OS=Pichia angusta GN=HSV2
PE=3 SV=1
Length = 360

Score = 30.8 bits (68), Expect = 5.1
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1

Query: 109 KATLHT-NTRSCQKQARSKLLRRGHVSSSCALLPHHFRCCWS 231
K TLH N + Q S + R H+ S+ L+P +FR WS
Sbjct: 259 KNTLHVYNLTAADPQPESAMANRLHLLSAVPLMPTYFRSVWS 300


tr_hit_id Q941N0
Definition tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
Align length 27
Score (bit) 37.7
E-value 0.47
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960755|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_E08, 5'
(581 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam ... 38 0.47
tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max P... 35 4.0
tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus... 34 6.8
tr|Q9VYV7|Q9VYV7_DROME Phosphorylase kinase gamma OS=Drosophila ... 33 8.8
tr|Q9I7D0|Q9I7D0_DROME Phosphorylase kinase gamma, isoform A OS=... 33 8.8
tr|Q961E7|Q961E7_DROME Phosphorylase kinase gamma, isoform B OS=... 33 8.8
tr|Q7K4Y9|Q7K4Y9_DROME GH22314p OS=Drosophila melanogaster GN=Ph... 33 8.8
tr|Q29JA5|Q29JA5_DROPS GA14880 OS=Drosophila pseudoobscura pseud... 33 8.8
tr|B4R361|B4R361_DROSI GD17041 OS=Drosophila simulans GN=GD17041... 33 8.8
tr|B4Q1S3|B4Q1S3_DROYA GE15660 OS=Drosophila yakuba GN=GE15660 P... 33 8.8
tr|B4MT15|B4MT15_DROWI GK20076 OS=Drosophila willistoni GN=GK200... 33 8.8
tr|B4MAI4|B4MAI4_DROVI GJ15921 OS=Drosophila virilis GN=GJ15921 ... 33 8.8
tr|B4L681|B4L681_DROMO GI16230 OS=Drosophila mojavensis GN=GI162... 33 8.8
tr|B4JM18|B4JM18_DROGR GH24413 OS=Drosophila grimshawi GN=GH2441... 33 8.8
tr|B4IK49|B4IK49_DROSE GM13103 OS=Drosophila sechellia GN=GM1310... 33 8.8
tr|B4H3T7|B4H3T7_DROPE GL15144 OS=Drosophila persimilis GN=GL151... 33 8.8
tr|B3NUA3|B3NUA3_DROER GG18438 OS=Drosophila erecta GN=GG18438 P... 33 8.8
tr|B3MSC4|B3MSC4_DROAN GF20823 OS=Drosophila ananassae GN=GF2082... 33 8.8

>tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
GN=DIP PE=4 SV=1
Length = 113

Score = 37.7 bits (86), Expect = 0.47
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2

Query: 580 IGEMLHMGGHRKEEEHPAHPPPQYAGD 500
IGE LH+GGH+KEEEH +Y G+
Sbjct: 8 IGETLHVGGHKKEEEHKGEVHGEYKGE 34


>tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max PE=4
SV=1
Length = 113

Score = 34.7 bits (78), Expect = 4.0
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2

Query: 580 IGEMLHMGGHRKEEEHPA-HPPPQYAGDY 497
IG LH+GGH+KEEEH H +Y G++
Sbjct: 8 IGGTLHVGGHKKEEEHKGEHHAGEYKGEH 36


>tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus
GN=Ptgs1 PE=2 SV=1
Length = 127

Score = 33.9 bits (76), Expect = 6.8
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1

Query: 214 FRCCWSCCHRRHPSSC 261
F CC SCC RRHP SC
Sbjct: 43 FPCCCSCCCRRHPRSC 58


>tr|Q9VYV7|Q9VYV7_DROME Phosphorylase kinase gamma OS=Drosophila
melanogaster GN=PhKgamma PE=2 SV=2
Length = 560

Score = 33.5 bits (75), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 507 QETMILAITVVVASIMVGCPPMWPRPPMISM 415
QE I A V++ +++VGCPP W R M+ +
Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242


>tr|Q9I7D0|Q9I7D0_DROME Phosphorylase kinase gamma, isoform A
OS=Drosophila melanogaster GN=PhKgamma PE=2 SV=2
Length = 502

Score = 33.5 bits (75), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 507 QETMILAITVVVASIMVGCPPMWPRPPMISM 415
QE I A V++ +++VGCPP W R M+ +
Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242


>tr|Q961E7|Q961E7_DROME Phosphorylase kinase gamma, isoform B
OS=Drosophila melanogaster GN=PhKgamma PE=2 SV=1
Length = 419

Score = 33.5 bits (75), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 507 QETMILAITVVVASIMVGCPPMWPRPPMISM 415
QE I A V++ +++VGCPP W R M+ +
Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242


>tr|Q7K4Y9|Q7K4Y9_DROME GH22314p OS=Drosophila melanogaster
GN=PhKgamma PE=2 SV=1
Length = 560

Score = 33.5 bits (75), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 507 QETMILAITVVVASIMVGCPPMWPRPPMISM 415
QE I A V++ +++VGCPP W R M+ +
Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242


>tr|Q29JA5|Q29JA5_DROPS GA14880 OS=Drosophila pseudoobscura
pseudoobscura GN=GA14880 PE=4 SV=2
Length = 571

Score = 33.5 bits (75), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 507 QETMILAITVVVASIMVGCPPMWPRPPMISM 415
QE I A V++ +++VGCPP W R M+ +
Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242


>tr|B4R361|B4R361_DROSI GD17041 OS=Drosophila simulans GN=GD17041
PE=4 SV=1
Length = 593

Score = 33.5 bits (75), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 507 QETMILAITVVVASIMVGCPPMWPRPPMISM 415
QE I A V++ +++VGCPP W R M+ +
Sbjct: 224 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 254


>tr|B4Q1S3|B4Q1S3_DROYA GE15660 OS=Drosophila yakuba GN=GE15660 PE=4
SV=1
Length = 606

Score = 33.5 bits (75), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3

Query: 507 QETMILAITVVVASIMVGCPPMWPRPPMISM 415
QE I A V++ +++VGCPP W R M+ +
Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242