DK960764 |
Clone id |
TST39A01NGRL0008_E17 |
Library |
TST39 |
Length |
690 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_E17. 5' end sequence. |
Accession |
DK960764 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL382Contig1 |
Sequence |
CGCCAGGGGACCAAGGGTTTCGCGAGGGTTTCCGGCCATGGCTGCAGCTGCTGCAGCTCT TTCTGCGCGCCCGTTCTCTCGGAATGATTTTTCTATTTCCGGCAGTGAGATCTGCTGTAG TAGCAGCTCTACCAGCAAGATCCTTGGAGGCCAGCTCGCCATCGGATCTAGAAATTATTC CCCTCTCAAGCTTGGATCCTCTCTCTGCCACAGCTATGGCACCTCCGCTTTGAGACAGAG ATTCGTCTCTTCGAAGCCTGGCAGTAGGAACAGGGAGCTGACAATAACGGCGAGTGCTGC TGCTGCCTCTGTTCCTGCGGCCCCTGCTCCTGCCCCTCCTTCCACCCAGCAATGGCAAGG CGCCGACATGAAATCCTTGCTTATTTCTATAGCTACAGGTGTTGCGATCTGGTTCATTCC TGCTCCCTCGGGAGTTTCAAAGAATGCTTGGCAGCTTCTTTCGATTTTCCTCGCCACTAT TGTGGGCATCATCACCCAACCTCTCCCTCTCGGAGCTGTGGCTCTCATGGGACTTGGTGC TTGCGTGCTAACCAAAACTCTCACATTTGCTGCAGCCTTCTCTTCTTTTGGTGATCCTAT CCCTTGTCTCATTGCCCTTGCCTTTTTCTTCGCTCGTGGTTTCATCAAGACAGGTCTCGG TAACCGCATCGCGTACCAATTTGTGCGTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41364 |
Definition |
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea |
Align length |
114 |
Score (bit) |
196.0 |
E-value |
1.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960764|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_E17, 5' (690 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chlorop... 196 1e-49 sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillu... 120 5e-27 sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia ... 67 9e-11 sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella... 62 2e-09 sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escheric... 62 2e-09 sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escheric... 62 2e-09 sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella... 62 4e-09 sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escheric... 62 4e-09 sp|Q57048|Y020_HAEIN Uncharacterized transporter HI0020 OS=Haemo... 61 5e-09 sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escheric... 61 5e-09 sp|Q8FDG7|TTDT_ECOL6 L-tartrate/succinate antiporter OS=Escheric... 61 5e-09 sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella... 60 8e-09 sp|Q31WX1|TTDT_SHIBS L-tartrate/succinate antiporter OS=Shigella... 60 1e-08 sp|P0AE74|CITT_ECOLI Citrate carrier OS=Escherichia coli (strain... 57 9e-08 sp|P0AE75|CITT_ECO57 Citrate carrier OS=Escherichia coli O157:H7... 57 9e-08 sp|P0AFU2|YFBS_ECOLI Uncharacterized transporter yfbS OS=Escheri... 44 8e-04 sp|P0AFU3|YFBS_ECO57 Uncharacterized transporter yfbS OS=Escheri... 44 8e-04 sp|Q9GZR3|CFC1_HUMAN Cryptic protein OS=Homo sapiens GN=CFC1 PE=... 38 0.059 sp|P97766|CFC1_MOUSE Cryptic protein OS=Mus musculus GN=Cfc1 PE=... 37 0.077 sp|Q39593|SAC1_CHLRE Putative sulfur deprivation response regula... 37 0.13 sp|Q5XIB1|TSSC4_RAT Protein TSSC4 OS=Rattus norvegicus GN=Tssc4 ... 34 0.84 sp|Q07252|MEMP_RALEH Membrane protein OS=Ralstonia eutropha (str... 33 1.4 sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila m... 31 5.5 sp|P0AA23|EBR_SALTY Putative ethidium bromide resistance protein... 31 5.5 sp|P0AA24|EBR_PSEAE Putative ethidium bromide resistance protein... 31 5.5 sp|P0AA22|EBR_ECOLX Putative ethidium bromide resistance protein... 31 5.5 sp|Q9P6R9|CWC22_SCHPO Pre-mRNA-splicing factor cwc22 OS=Schizosa... 31 5.5 sp|O67776|Y1964_AQUAE Putative zinc metalloprotease aq_1964 OS=A... 31 7.1 sp|Q1QF31|NHAA_NITHX Na(+)/H(+) antiporter nhaA OS=Nitrobacter h... 31 7.1 sp|A1B673|ILVD_PARDP Dihydroxy-acid dehydratase OS=Paracoccus de... 31 7.1
>sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1 Length = 569
Score = 196 bits (497), Expect = 1e-49 Identities = 97/114 (85%), Positives = 104/114 (91%) Frame = +2
Query: 347 QQWQGADMKSLLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVAL 526 Q WQGA +K LL SI TGV IWFIP P GVS+NAWQLL+IFL+TIVGIITQPLPLGAVAL Sbjct: 97 QPWQGASIKPLLASILTGVIIWFIPTPEGVSRNAWQLLAIFLSTIVGIITQPLPLGAVAL 156
Query: 527 MGLGACVLTKTLTFAAAFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFVR 688 MGLGA VLTKTLTF+AAFS+FGDPIP LIALAFFFARGFIKTGLGNRIAYQFV+ Sbjct: 157 MGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVK 210
>sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillus subtilis GN=yflS PE=2 SV=1 Length = 478
Score = 120 bits (302), Expect = 5e-27 Identities = 57/104 (54%), Positives = 75/104 (72%) Frame = +2
Query: 377 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLTK 556 LLI++A G+ IWFIPAPSG+ AW L +IF+ATI+G I++PLP+GA+A+ L LT Sbjct: 18 LLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPMGAIAIFALAVTALTG 77
Query: 557 TLTFAAAFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFVR 688 TL+ S FG+ LI +AFF +RGFIKTGLG RI+Y FV+ Sbjct: 78 TLSIEDTLSGFGNKTIWLIVIAFFISRGFIKTGLGARISYVFVQ 121
>sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia coli (strain K12) GN=ybhI PE=1 SV=1 Length = 477
Score = 67.0 bits (162), Expect = 9e-11 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%) Frame = +2
Query: 377 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLT- 553 L++ +A I F+PAP+G+S+ AW L I+LA IVG++ +P P V L+ + A ++ Sbjct: 9 LILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVV 68
Query: 554 -----KTLTFAAAFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 A S + L+ AF + F+ TGLG RIAY + Sbjct: 69 GNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLI 117
>sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046) GN=ttdT PE=3 SV=1 Length = 487
Score = 62.4 bits (150), Expect = 2e-09 Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 18/121 (14%) Frame = +2
Query: 380 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 556 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 557 TLTFAA-----------------AFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 L F+ A S F + + LI AF F G+ KTGLG RIA V Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILV 130
Query: 686 R 688 + Sbjct: 131 K 131
>sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 62.4 bits (150), Expect = 2e-09 Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 18/121 (14%) Frame = +2
Query: 380 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 556 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 557 TLTFAA-----------------AFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 L F+ A S F + + LI AF F G+ KTGLG RIA V Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILV 130
Query: 686 R 688 + Sbjct: 131 K 131
>sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escherichia coli O157:H7 GN=ttdT PE=2 SV=1 Length = 487
Score = 62.4 bits (150), Expect = 2e-09 Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 18/121 (14%) Frame = +2
Query: 380 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 556 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 557 TLTFAA-----------------AFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 L F+ A S F + + LI AF F G+ KTGLG RIA V Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILV 130
Query: 686 R 688 + Sbjct: 131 K 131
>sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella flexneri GN=ttdT PE=3 SV=1 Length = 487
Score = 61.6 bits (148), Expect = 4e-09 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 18/121 (14%) Frame = +2
Query: 380 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 556 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 557 TLTFAA-----------------AFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 L F+ A S F + + LI AF F G+ KTGLG RIA V Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILV 130
Query: 686 R 688 + Sbjct: 131 K 131
>sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escherichia coli (strain K12) GN=ttdT PE=1 SV=2 Length = 487
Score = 61.6 bits (148), Expect = 4e-09 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 18/121 (14%) Frame = +2
Query: 380 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 556 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 557 TLTFAA-----------------AFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 L F+ A S F + + LI AF F G+ KTGLG RIA V Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILV 130
Query: 686 R 688 + Sbjct: 131 K 131
>sp|Q57048|Y020_HAEIN Uncharacterized transporter HI0020 OS=Haemophilus influenzae GN=HI0020 PE=3 SV=1 Length = 479
Score = 61.2 bits (147), Expect = 5e-09 Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 11/114 (9%) Frame = +2
Query: 377 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQP-----LPLGAVALMGL-- 535 L+I +A + + +PAP G+S AW+LL +++ATIVG++ +P + L A+A+ G+ Sbjct: 9 LVILMAIPLITFLLPAPDGLSLIAWRLLGVYIATIVGLVLKPYGEPVILLAAIAVSGVII 68
Query: 536 ----GACVLTKTLTFAAAFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 GA L K + S LI AF + F+ TGLG RIAY + Sbjct: 69 GNTEGAKELVKVGNMLDGYKS---GTTWLIFTAFTLSSAFVITGLGKRIAYHMI 119
>sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escherichia coli (strain UTI89 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 61.2 bits (147), Expect = 5e-09 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 18/121 (14%) Frame = +2
Query: 380 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 556 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 557 TLTFAA-----------------AFSSFGDPIPCLIALAFFFARGFIKTGLGNRIAYQFV 685 L F+ A S F + + LI AF F G+ KTGLG RIA V Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILV 130
Query: 686 R 688 + Sbjct: 131 K 131
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LXV3 |
Definition |
tr|Q9LXV3|Q9LXV3_ARATH 2-oxoglutarate/malate translocator-like protein OS=Arabidopsis thaliana |
Align length |
112 |
Score (bit) |
195.0 |
E-value |
3.0e-48 |
Report |
|