| DK960769 |
| Clone id |
TST39A01NGRL0008_E22 |
| Library |
TST39 |
| Length |
671 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_E22. 5' end sequence. |
| Accession |
DK960769 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL2553Contig1 |
| Sequence |
AAGCAGAGGTGTGGAGAATGCCCTCCTTCTTGTACACCTCATCATTCTATAATCCTCAGC
AAGATGCCAGGCCTGGAGGATCCTTTGAAGAAATCAACCCTGCCAATCGCATGCCTGTGC
ATGCAAATCAAGTCCCTGCACCTGGACAGAAAGAACCATTGTCTACTCTGCGACAGAAAT
CGACTATCCCAAAAGGTGGTACTGAGGACACATGGGTATATCCATCTCCACAGATGTTCT
TTAATAGTCTTGTCAGGAAGAACAAAGCAGATGATGTGACAGAGAACGATATGGATGCAG
TTGTAGCTACTCATAATTCAGTGAATGAAGCCACATGGTCTCGGTTACTTCGTTGGGAGC
AGTTGTATGCAGAGATGTACCCTGAGTCTGGGCGGGAGGACCCCCGTTTGCTTCATTTTC
GAGGTCGCCCAACTGACTTGACACCGAAGGCTTACTTGAAGAAGTTTTCTGGGGTTTGGA
GTGCCTTTTGATAGGCATGATTGGATTGTTGATAGGGGAGGTCGGGAAATGCGATATGTA
ATTGATTTTTATTATGATGAAAGTAAGGATTGGCCGTTTTTTGTGGATGTAAGGCCAGCT
TTGGATTCACCAGCTGCTGTGTTACTTCGAGCGAACATGGTGATGCGCAACATTGTGGGT
AAAGTCCCGTC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q552W5 |
| Definition |
sp|Q552W5|CCHL_DICDI Probable cytochrome c-type heme lyase OS=Dictyostelium discoideum |
| Align length |
149 |
| Score (bit) |
108.0 |
| E-value |
8.0e-38 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960769|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_E22, 5'
(671 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q552W5|CCHL_DICDI Probable cytochrome c-type heme lyase OS=Di... 108 8e-38
sp|Q5F339|CCHL_CHICK Cytochrome c-type heme lyase OS=Gallus gall... 110 2e-37
sp|A5PJG7|CCHL_BOVIN Cytochrome c-type heme lyase OS=Bos taurus ... 107 1e-36
sp|P53701|CCHL_HUMAN Cytochrome c-type heme lyase OS=Homo sapien... 104 3e-36
sp|P53702|CCHL_MOUSE Cytochrome c-type heme lyase OS=Mus musculu... 105 3e-35
sp|P53703|CCHL_CAEEL Probable cytochrome c-type heme lyase OS=Ca... 110 9e-34
sp|P53700|CCHL_CANAL Cytochrome c heme lyase OS=Candida albicans... 110 8e-32
sp|P06182|CCHL_YEAST Cytochrome c heme lyase OS=Saccharomyces ce... 88 1e-26
sp|P14187|CCHL_NEUCR Cytochrome c heme lyase OS=Neurospora crass... 96 2e-26
sp|Q00873|CYT2_YEAST Cytochrome c1 heme lyase OS=Saccharomyces c... 72 1e-20
sp|O74794|CCHL_SCHPO Putative cytochrome c heme lyase OS=Schizos... 67 5e-19
sp|O13962|YE42_SCHPO Putative cytochrome c1 heme lyase OS=Schizo... 75 4e-13
sp|Q8IUN9|CLC10_HUMAN C-type lectin domain family 10 member A OS... 33 1.8
sp|Q5AVC7|KU70_EMENI Protein Ku70 OS=Emericella nidulans GN=ku70... 32 2.3
sp|A1TJ13|RS3_ACIAC 30S ribosomal protein S3 OS=Acidovorax avena... 31 6.8
sp|Q7S9J6|IML1_NEUCR Vacuolar membrane-associated protein iml-1 ... 31 6.8
sp|P24014|SLIT_DROME Protein slit OS=Drosophila melanogaster GN=... 30 8.8
sp|A1WHD1|RS3_VEREI 30S ribosomal protein S3 OS=Verminephrobacte... 30 8.8
sp|A3MSM9|PDXT_PYRCJ Glutamine amidotransferase subunit pdxT OS=... 30 8.8
sp|Q5XIB5|CCD86_RAT Coiled-coil domain-containing protein 86 OS=... 30 8.8
>sp|Q552W5|CCHL_DICDI Probable cytochrome c-type heme lyase
OS=Dictyostelium discoideum GN=cchl PE=3 SV=1
Length = 211
Score = 108 bits (270), Expect(2) = 8e-38
Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Frame = +3
Query: 36 TSSFYNPQQDARPGGS--FEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTED 209
TS + DA GG +INPAN M NQ P P Q +PLST R STIP+ +D
Sbjct: 9 TSITKSSPTDAMGGGCPIAHDINPANHM-YKPNQNPHPDQTKPLSTERITSTIPRT-EKD 66
Query: 210 TWVYPSPQMFFNSLVRKNKADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPES 389
W YPSPQMFFN++ K K + E DM V++ HN+VNE W +L+WE Y ++ P
Sbjct: 67 NWQYPSPQMFFNAM--KKKQYEPKEEDMSVVISIHNTVNEKCWEDVLQWENDYKDVCP-- 122
Query: 390 GREDPRLLHFRGRPTDLTPKA-YLKKFSG 473
+P+L F+G+ TD +PKA +L F G
Sbjct: 123 ---NPKLKKFKGKATDFSPKAKFLNTFLG 148
Score = 69.3 bits (168), Expect(2) = 8e-38
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 5/53 (9%)
Frame = +1
Query: 463 SFLGFGVPFDRHDWIVDRGGREMRYVIDFY-----YDESKDWPFFVDVRPALD 606
+FLG+ +PFDRHDWIVDR G+E+RYVIDFY D K ++DVRPA+D
Sbjct: 145 TFLGYKLPFDRHDWIVDRNGKEVRYVIDFYEGRINKDSGKSIGIYIDVRPAID 197
>sp|Q5F339|CCHL_CHICK Cytochrome c-type heme lyase OS=Gallus gallus
GN=HCCS PE=2 SV=1
Length = 273
Score = 110 bits (274), Expect(2) = 2e-37
Identities = 53/132 (40%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Frame = +3
Query: 87 EEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVRKN- 263
++I+P+N MP NQ+P+P Q PLST+R++S+IP+ ++ WVYPS QMF+N+++RK
Sbjct: 82 DDIDPSNMMPP-PNQLPSPDQPFPLSTVREESSIPRAHSDKKWVYPSEQMFWNAMLRKGW 140
Query: 264 --KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTD 437
K DD+T DM ++ HN NE W +L+WE L+A P P L+ F G+ +
Sbjct: 141 RWKDDDITSEDMTNIIKIHNQNNEQAWKEILKWEALHAMECPCG----PSLMRFGGKAKE 196
Query: 438 LTPKAYLKKFSG 473
+P+A ++ + G
Sbjct: 197 YSPRARIRSWMG 208
Score = 66.6 bits (161), Expect(2) = 2e-37
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESKDWPF---FVDVRPALDSPAAV 621
RS++G+ +PFDRHDWIVDR G+E+RYVID+Y + D + +DVRPA DS +AV
Sbjct: 204 RSWMGYELPFDRHDWIVDRCGKEVRYVIDYYDGGAVDKNYQFTILDVRPAFDSLSAV 260
>sp|A5PJG7|CCHL_BOVIN Cytochrome c-type heme lyase OS=Bos taurus
GN=HCCS PE=2 SV=1
Length = 275
Score = 107 bits (268), Expect(2) = 1e-36
Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 3/132 (2%)
Frame = +3
Query: 87 EEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVRKN- 263
E ++P+N MP NQ PAP Q PLST+R++S+IP+ ++ WVYPS QMF+N+++RK
Sbjct: 84 ENLDPSNLMPP-PNQTPAPDQPFPLSTVREESSIPRADSDKKWVYPSEQMFWNAMLRKGW 142
Query: 264 --KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTD 437
K +D+++ DM ++ HN NE W +L+WE L+A P P L+ F G+ +
Sbjct: 143 KWKDEDISQKDMYNIIRIHNQNNEQAWKEILKWEALHAAECPCG----PSLIRFGGKAKE 198
Query: 438 LTPKAYLKKFSG 473
+P+A ++ + G
Sbjct: 199 YSPRARIRSWMG 210
Score = 66.2 bits (160), Expect(2) = 1e-36
Identities = 32/57 (56%), Positives = 46/57 (80%), Gaps = 3/57 (5%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFY--YDESKDWPF-FVDVRPALDSPAAV 621
RS++G+ +PFDRHDWI++R G E+RYVID+Y + ++D+ F +DVRPALDS +AV
Sbjct: 206 RSWMGYELPFDRHDWIINRCGTEVRYVIDYYDGGEVNQDYQFTILDVRPALDSLSAV 262
>sp|P53701|CCHL_HUMAN Cytochrome c-type heme lyase OS=Homo sapiens
GN=HCCS PE=1 SV=1
Length = 268
Score = 104 bits (260), Expect(2) = 3e-36
Identities = 51/132 (38%), Positives = 82/132 (62%), Gaps = 3/132 (2%)
Frame = +3
Query: 87 EEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVRKN- 263
E ++P+N MP NQ PAP Q LST+R++S+IP+ +E WVYPS QMF+N++++K
Sbjct: 77 ENLDPSNLMPP-PNQTPAPDQPFALSTVREESSIPRADSEKKWVYPSEQMFWNAMLKKGW 135
Query: 264 --KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTD 437
K +D+++ DM ++ HN NE W +L+WE L+A P P L+ F G+ +
Sbjct: 136 KWKDEDISQKDMYNIIRIHNQNNEQAWKEILKWEALHAAECPCG----PSLIRFGGKAKE 191
Query: 438 LTPKAYLKKFSG 473
+P+A ++ + G
Sbjct: 192 YSPRARIRSWMG 203
Score = 67.8 bits (164), Expect(2) = 3e-36
Identities = 33/57 (57%), Positives = 46/57 (80%), Gaps = 3/57 (5%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFY--YDESKDWPF-FVDVRPALDSPAAV 621
RS++G+ +PFDRHDWI++R G E+RYVID+Y + +KD+ F +DVRPALDS +AV
Sbjct: 199 RSWMGYELPFDRHDWIINRCGTEVRYVIDYYDGGEVNKDYQFTILDVRPALDSLSAV 255
>sp|P53702|CCHL_MOUSE Cytochrome c-type heme lyase OS=Mus musculus
GN=Hccs PE=2 SV=1
Length = 272
Score = 105 bits (261), Expect(2) = 3e-35
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
Frame = +3
Query: 87 EEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVRKN- 263
E ++P+N MP NQ P+P Q LST R++S+IP+ +E WVYPS QMF+N+++RK
Sbjct: 81 ESLDPSNLMPP-PNQTPSPDQPFTLSTSREESSIPRADSEKKWVYPSEQMFWNAMLRKGW 139
Query: 264 --KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTD 437
K DD+++ DM ++ HN NE W +L+WE L+A P P L+ F G+ +
Sbjct: 140 KWKDDDISQKDMYNIIRIHNQNNEQAWKEILKWEALHAHECPCG----PSLVRFGGKARE 195
Query: 438 LTPKAYLKKFSG 473
+P+A ++ + G
Sbjct: 196 YSPRARIRSWMG 207
Score = 64.3 bits (155), Expect(2) = 3e-35
Identities = 31/57 (54%), Positives = 45/57 (78%), Gaps = 3/57 (5%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFY--YDESKDWPF-FVDVRPALDSPAAV 621
RS++G+ +PFDRHDWI++R G E+RYVID+Y + +K++ F +DVRPA DS +AV
Sbjct: 203 RSWMGYELPFDRHDWIINRCGTEVRYVIDYYDGGEVNKEYQFTILDVRPAFDSFSAV 259
>sp|P53703|CCHL_CAEEL Probable cytochrome c-type heme lyase
OS=Caenorhabditis elegans GN=cchl-1 PE=2 SV=1
Length = 280
Score = 110 bits (274), Expect(2) = 9e-34
Identities = 56/130 (43%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
Frame = +3
Query: 75 GGSFEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTE-DTWVYPSPQMFFNSL 251
G INP N H NQ PAP Q L T R+KSTIPK GTE +TW YPSPQMF+N++
Sbjct: 60 GADKASINPLNNELEHPNQKPAPDQPFALPTKREKSTIPKAGTETETWTYPSPQMFWNAM 119
Query: 252 VRKN---KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFR 422
++K + D ++++DM+ +++ HN+ NE W +L+WE L ++PE +P+L F+
Sbjct: 120 LKKGWRWQDDSLSKSDMENIISIHNANNEEAWREVLKWENL---LHPECA--EPKLKSFK 174
Query: 423 GRPTDLTPKA 452
G +L+P+A
Sbjct: 175 GDAKNLSPRA 184
Score = 54.3 bits (129), Expect(2) = 9e-34
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Frame = +1
Query: 466 FLGFGVPFDRHDWIVDR-GGREMRYVIDFY----YDESKDWPFFVDVRPALD 606
FLG+ +PFDRHDWIVDR G ++++YVID+Y D S +DVRPA++
Sbjct: 190 FLGYDLPFDRHDWIVDRCGTKQVQYVIDYYDGGAVDPSSKLFTILDVRPAVN 241
>sp|P53700|CCHL_CANAL Cytochrome c heme lyase OS=Candida albicans
GN=CYC3 PE=3 SV=1
Length = 264
Score = 110 bits (275), Expect(2) = 8e-32
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Frame = +3
Query: 87 EEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDT--WVYPSPQMFFNSLVRK 260
E +NP N MP+ + APGQ+ LST R STIP+G +ED W YPSPQ N+++ K
Sbjct: 50 EVLNPLNNMPMAISSERAPGQRIKLSTERTISTIPRGESEDQGLWEYPSPQQMLNAMLSK 109
Query: 261 NKADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTDL 440
K D V E+ ++++V HN +NE W ++L WE + Y + + +PRL F GRP DL
Sbjct: 110 GKGDVVPEDAVESMVEVHNFLNEGAWQQILTWE----DQYTQQTKVEPRLKKFTGRPHDL 165
Query: 441 TPKAYLKKFSG 473
+PKA + + G
Sbjct: 166 SPKARMYLWLG 176
Score = 47.4 bits (111), Expect(2) = 8e-32
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 10/52 (19%)
Frame = +1
Query: 484 PFDRHDWIV------DRGGREMRYVIDFY---YDESKDWP-FFVDVRPALDS 609
PFDRHDW V ++G +E+RYVID+Y DE P F +D RPALD+
Sbjct: 188 PFDRHDWTVLRSCGRNQGWKEVRYVIDYYGAPDDEEAGMPAFMLDTRPALDN 239
>sp|P06182|CCHL_YEAST Cytochrome c heme lyase OS=Saccharomyces
cerevisiae GN=CYC3 PE=1 SV=1
Length = 269
Score = 87.8 bits (216), Expect(2) = 1e-26
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Frame = +3
Query: 30 LYTSSFYNPQQDARP--GGSFEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKG-G 200
++ SS +P P G + INP N MP A PGQK L R S+IPK
Sbjct: 29 MHESSSSSPPSSECPVMQGDNDRINPLNNMPELAAS-KQPGQKMDLPVDRTISSIPKSPD 87
Query: 201 TEDTWVYPSPQMFFNSLVRKNK---ADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYA 371
+ + W YPSPQ +N++VRK K + +V E+ ++++V HN +NE W +L WE
Sbjct: 88 SNEFWEYPSPQQMYNAMVRKGKIGGSGEVAEDAVESMVQVHNFLNEGCWQEVLEWE---- 143
Query: 372 EMYPESGREDPRLLHFRGRPTDLTPKA 452
+ + + P+LL F G+P L+P+A
Sbjct: 144 KPHTDESHVQPKLLKFMGKPGVLSPRA 170
Score = 52.4 bits (124), Expect(2) = 1e-26
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 13/56 (23%)
Frame = +1
Query: 481 VPFDRHDWIVDRGGR----------EMRYVIDFY---YDESKDWPFFVDVRPALDS 609
+PFDRHDWIV RG R E+RYV+DFY DE+ F VDVRPALDS
Sbjct: 188 LPFDRHDWIVLRGERKAEQQPPTFKEVRYVLDFYGGPDDENGMPTFHVDVRPALDS 243
>sp|P14187|CCHL_NEUCR Cytochrome c heme lyase OS=Neurospora crassa
GN=cyt-2 PE=3 SV=1
Length = 346
Score = 95.5 bits (236), Expect(2) = 2e-26
Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 25/155 (16%)
Frame = +3
Query: 84 FEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVRKN 263
F ++NP N M +Q PAP Q L T R S+IPKG + W YPSPQ +N+L+RK
Sbjct: 105 FSKLNPLNYMFSSISQEPAPNQAIALPTERDPSSIPKGTGDGNWEYPSPQQMYNALLRKG 164
Query: 264 KAD-DVTENDMDAVVATHNSVNEATWSRLLRWEQLYA----------------------- 371
D D+T ++++VA HN +NE W+ ++ WE+ +
Sbjct: 165 YTDTDITA--VESMVAVHNFLNEGAWNEIVEWERRFGKGLMRGWEIMKRGEENAPMMLRR 222
Query: 372 -EMYPESGREDPRLLHFRGRPTDLTPKAYLKKFSG 473
E P L+ F+GRP D+TPKA L + G
Sbjct: 223 LEAQENDPEPQPTLIRFQGRPKDMTPKAALLQVLG 257
Score = 44.3 bits (103), Expect(2) = 2e-26
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 7/47 (14%)
Frame = +1
Query: 484 PFDRHDWIVDRG----GREMRYVIDFYY---DESKDWPFFVDVRPAL 603
PFDRHDW V R +E+RYVIDFY + + + F++DVRPA+
Sbjct: 268 PFDRHDWYVSRDENGQKKEVRYVIDFYSAPPEPTGEPVFYLDVRPAV 314
>sp|Q00873|CYT2_YEAST Cytochrome c1 heme lyase OS=Saccharomyces
cerevisiae GN=CYT2 PE=1 SV=1
Length = 224
Score = 72.4 bits (176), Expect(2) = 1e-20
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Frame = +3
Query: 63 DARPGGSFEEINPANRMPVHANQVPAPGQKEP-------LSTLRQKSTIPKGGTEDTWVY 221
+A PG + P N++ AN P K P LS R+ STIP+ ++ W+Y
Sbjct: 27 EAHPGATA----PGNQLECSAN--PQDNDKTPEYHTTVDLSQSREVSTIPRTNSDRNWIY 80
Query: 222 PSPQMFFNSLVRKNKADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGRE- 398
PS + F+ ++++KN D +DM VV HNS+NE W+ + WE + G E
Sbjct: 81 PSEKQFYEAMMKKNW--DPNSDDMKVVVPLHNSINERVWNYIKSWED-------KQGGEA 131
Query: 399 --DPRLLHFRGRPTDLTPKAYLK 461
+L +F+G LTP+A+ +
Sbjct: 132 CGGIKLTNFKGDSKKLTPRAWFR 154
Score = 48.1 bits (113), Expect(2) = 1e-20
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Frame = +1
Query: 484 PFDRHDWIVDRGGREMRYVIDFYYDESKDWP------FFVDVRPALDSPAAVLLR 630
PFDRHDW +DR G+ + YVIDFY + D ++DVRP L+S LR
Sbjct: 163 PFDRHDWQIDRCGKTVDYVIDFYSTDLNDANSQQQPLIYLDVRPKLNSFEGFRLR 217
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A8J5J2 |
| Definition |
tr|A8J5J2|A8J5J2_CHLRE Cytochrome c heme lyase OS=Chlamydomonas reinhardtii |
| Align length |
153 |
| Score (bit) |
150.0 |
| E-value |
1.0e-47 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960769|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_E22, 5'
(671 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A8J5J2|A8J5J2_CHLRE Cytochrome c heme lyase OS=Chlamydomonas ... 150 1e-47
tr|A4S975|A4S975_OSTLU Predicted protein OS=Ostreococcus lucimar... 138 4e-45
tr|Q00TD2|Q00TD2_OSTTA Holocytochrome c synthase/heme-lyase (ISS... 135 9e-45
tr|B7G6M9|B7G6M9_PHATR Predicted protein (Fragment) OS=Phaeodact... 135 2e-39
tr|Q6DGN8|Q6DGN8_DANRE Holocytochrome c synthetase a OS=Danio re... 115 1e-36
tr|A7RTZ6|A7RTZ6_NEMVE Predicted protein OS=Nematostella vectens... 117 1e-36
tr|Q7QFU4|Q7QFU4_ANOGA AGAP003843-PA OS=Anopheles gambiae GN=AGA... 115 1e-36
tr|Q4RZJ2|Q4RZJ2_TETNG Chromosome undetermined SCAF14815, whole ... 112 2e-36
tr|Q6DCG6|Q6DCG6_XENLA Hccs-prov protein OS=Xenopus laevis GN=hc... 110 3e-36
tr|Q7ZTL8|Q7ZTL8_XENLA Hccs-prov protein OS=Xenopus laevis PE=2 ... 110 6e-36
tr|Q6DJ96|Q6DJ96_XENTR Holocytochrome c synthase (Cytochrome c h... 107 8e-36
tr|B4M0N3|B4M0N3_DROVI GJ24087 OS=Drosophila virilis GN=GJ24087 ... 108 1e-35
tr|B3LVL0|B3LVL0_DROAN GF16950 OS=Drosophila ananassae GN=GF1695... 107 2e-35
tr|Q68D50|Q68D50_HUMAN Putative uncharacterized protein DKFZp779... 104 4e-35
tr|B3KUS1|B3KUS1_HUMAN cDNA FLJ40496 fis, clone TESTI2044788, hi... 104 4e-35
tr|B5X177|B5X177_SALSA Cytochrome c-type heme lyase OS=Salmo sal... 107 5e-35
tr|B4K6L0|B4K6L0_DROMO GI22295 OS=Drosophila mojavensis GN=GI222... 105 9e-35
tr|Q1HQR9|Q1HQR9_AEDAE Holocytochrome c synthetase (Fragment) OS... 103 2e-34
tr|Q16FU7|Q16FU7_AEDAE Cytochrome C1 heme lyase OS=Aedes aegypti... 103 2e-34
tr|Q4TEG3|Q4TEG3_TETNG Chromosome undetermined SCAF5407, whole g... 107 2e-34
tr|A8WT56|A8WT56_CAEBR CBR-CCHL-1 protein OS=Caenorhabditis brig... 114 2e-34
tr|Q803H2|Q803H2_DANRE Holocytochrome c synthase OS=Danio rerio ... 105 2e-34
tr|B4JRL5|B4JRL5_DROGR GH19837 OS=Drosophila grimshawi GN=GH1983... 103 3e-34
tr|Q6P5G5|Q6P5G5_MOUSE Hccs protein OS=Mus musculus GN=Hccs PE=2... 105 3e-34
tr|Q9VD55|Q9VD55_DROME Cytochrome c heme lyase OS=Drosophila mel... 102 4e-34
tr|B4QZD0|B4QZD0_DROSI GD18482 OS=Drosophila simulans GN=GD18482... 102 4e-34
tr|B4PLJ5|B4PLJ5_DROYA GE24063 OS=Drosophila yakuba GN=GE24063 P... 102 4e-34
tr|B4HM80|B4HM80_DROSE GM23672 OS=Drosophila sechellia GN=GM2367... 102 4e-34
tr|B3P7P2|B3P7P2_DROER GG12543 OS=Drosophila erecta GN=GG12543 P... 102 4e-34
tr|Q297T6|Q297T6_DROPS GA19303 OS=Drosophila pseudoobscura pseud... 102 5e-34
>tr|A8J5J2|A8J5J2_CHLRE Cytochrome c heme lyase OS=Chlamydomonas
reinhardtii GN=HCS1 PE=4 SV=1
Length = 292
Score = 150 bits (379), Expect(2) = 1e-47
Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 5/153 (3%)
Frame = +3
Query: 30 LYTSSFYNPQQDARPGG-----SFEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPK 194
+Y +P A+P + ++P N MP+ NQ+P PGQ++PLST R S IPK
Sbjct: 48 VYGQRINDPNSQAKPSPLASITGADVLDPKNNMPLEPNQLPCPGQRKPLSTERVASNIPK 107
Query: 195 GGTEDTWVYPSPQMFFNSLVRKNKADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAE 374
GGTE TW++PSPQM FN+L RK K DDVTE+DMD +A HNS+NEATW R+ +WE L+
Sbjct: 108 GGTESTWLFPSPQMVFNALKRKGKGDDVTEDDMDGFIAAHNSMNEATWQRVAQWEMLH-- 165
Query: 375 MYPESGREDPRLLHFRGRPTDLTPKAYLKKFSG 473
+ P LL F+G+P DL+P A+++ G
Sbjct: 166 ---RGECDTPTLLRFQGKPHDLSPLAWVRHMLG 195
Score = 63.9 bits (154), Expect(2) = 1e-47
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESK---DWPFFVDVRPALDSPAAVLLR 630
R LG PFDRHDW++DR G+E+RY+IDFY+ + K F + RPA+DS A L R
Sbjct: 191 RHMLGGPAPFDRHDWVIDRCGKEVRYIIDFYFFDDKAGTPQAFEIVARPAVDSVEAALDR 250
Query: 631 ANM 639
M
Sbjct: 251 VKM 253
>tr|A4S975|A4S975_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_13359 PE=4 SV=1
Length = 229
Score = 138 bits (348), Expect(2) = 4e-45
Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Frame = +3
Query: 87 EEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTED-TWVYPSPQMFFNSLVRKN 263
+ ++P N MP Q APGQ++ LS R++STIPK G++ TW YPSPQMF+N+LVRKN
Sbjct: 22 DALDPRNNMPSEPAQGRAPGQRDALSVARERSTIPKSGSDGGTWTYPSPQMFYNALVRKN 81
Query: 264 KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTDLT 443
KA+DV E+DMD+VV HN++NE TW R+ +WE+L+A R P LL FRGRP +L+
Sbjct: 82 KAEDVEESDMDSVVMVHNAMNEDTWRRVAQWEKLHA-----YARGQPMLLRFRGRPDELS 136
Query: 444 PKAYLKKFSG 473
P A + +G
Sbjct: 137 PLAMARLMTG 146
Score = 67.4 bits (163), Expect(2) = 4e-45
Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESK---DWPFFVDVRPALDSPAAVLLR 630
R G PFDRHDW VDR GRE+RYVID+Y++E K F V VRPALDS AVL R
Sbjct: 142 RLMTGGARPFDRHDWYVDREGREVRYVIDYYFNEDKAGTSEQFDVVVRPALDSVDAVLDR 201
Query: 631 ANM 639
M
Sbjct: 202 IKM 204
>tr|Q00TD2|Q00TD2_OSTTA Holocytochrome c synthase/heme-lyase (ISS)
OS=Ostreococcus tauri GN=Ot17g01570 PE=4 SV=1
Length = 292
Score = 135 bits (339), Expect(2) = 9e-45
Identities = 67/128 (52%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
Frame = +3
Query: 93 INPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTED-TWVYPSPQMFFNSLVRKNKA 269
++P N MP NQ APGQ+E LS R+ STIPK G++ W YPSPQMF+N+LVRKNKA
Sbjct: 86 LDPRNNMPSEPNQRRAPGQREKLSVNREPSTIPKSGSDGGVWTYPSPQMFYNALVRKNKA 145
Query: 270 DDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTDLTPK 449
DDV E+DM++VV HN++NE TW R+ +WE+L+ E + P LL FRGRP +L+P
Sbjct: 146 DDVEESDMESVVMVHNAMNEDTWRRVAQWEKLH-----EYTKGRPMLLRFRGRPDELSPL 200
Query: 450 AYLKKFSG 473
A + G
Sbjct: 201 ALARLMFG 208
Score = 69.7 bits (169), Expect(2) = 9e-45
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESK---DWPFFVDVRPALDSPAAVLLR 630
R G PFDRHDW VDR GRE+RYVID+Y++E K F V VRPALD+P A+L R
Sbjct: 204 RLMFGGARPFDRHDWYVDREGREVRYVIDYYFNEEKAGTSEQFDVVVRPALDTPEALLDR 263
Query: 631 ANM 639
M
Sbjct: 264 VKM 266
>tr|B7G6M9|B7G6M9_PHATR Predicted protein (Fragment)
OS=Phaeodactylum tricornutum CCAP 1055/1
GN=PHATRDRAFT_6437 PE=4 SV=1
Length = 212
Score = 135 bits (341), Expect(2) = 2e-39
Identities = 66/128 (51%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = +3
Query: 87 EEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTED-TWVYPSPQMFFNSLVRKN 263
+ I+P N MP ANQ+PAPGQ + L T R STIPKGGT++ TW YPSPQMF+N+L RK
Sbjct: 14 QPIDPKNNMPKIANQLPAPGQSKELPTERVHSTIPKGGTDNSTWTYPSPQMFYNALARKG 73
Query: 264 KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTDLT 443
K D E+D+ +VVA HN++NE TW ++L WE++ + P+LL F+GRP+DL+
Sbjct: 74 KLGDTDEDDIISVVALHNNMNEKTWQKVLEWEKVLC----ANSATLPKLLRFQGRPSDLS 129
Query: 444 PKAYLKKF 467
PKA K +
Sbjct: 130 PKAAFKHY 137
Score = 51.2 bits (121), Expect(2) = 2e-39
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 18/72 (25%)
Frame = +1
Query: 469 LGFGVPFDRHDWIVDRG-GREMRYVIDFYYDESK-----------------DWPFFVDVR 594
LG +P+DRHDW V R G +RYVID+Y+D++K VDVR
Sbjct: 139 LGHPMPYDRHDWTVLRADGTTVRYVIDYYHDDTKARDEASSALPELSDAEATPSLLVDVR 198
Query: 595 PALDSPAAVLLR 630
PALDSP + R
Sbjct: 199 PALDSPVQLYNR 210
>tr|Q6DGN8|Q6DGN8_DANRE Holocytochrome c synthetase a OS=Danio rerio
GN=hccsa PE=2 SV=1
Length = 276
Score = 115 bits (288), Expect(2) = 1e-36
Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 3/134 (2%)
Frame = +3
Query: 81 SFEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVRK 260
+ +INPAN MP NQ P+ Q PLS +R++STIP+ G E WVYPS QMF+N+++RK
Sbjct: 85 TLSDINPANMMPP-PNQQPSADQPFPLSVVREESTIPRAGAEQNWVYPSEQMFWNAMLRK 143
Query: 261 N---KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRP 431
DD+ +NDM ++ HN NE W +LRWE+L+++ P P LL F G+
Sbjct: 144 GWRWNKDDINQNDMGDIIKIHNQNNEQAWQEILRWEKLHSKECPCG----PSLLRFGGKA 199
Query: 432 TDLTPKAYLKKFSG 473
D +P+A + + G
Sbjct: 200 KDFSPRARFRYWMG 213
Score = 62.4 bits (150), Expect(2) = 1e-36
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESKDWPFFVDVRPALDSPAAV 621
R ++G +PFDRHDWIVDR G+E+RYVID+Y +DVRPA DS AV
Sbjct: 209 RYWMGHELPFDRHDWIVDRCGKEVRYVIDYYDGGLVSKHTILDVRPAFDSLGAV 262
>tr|A7RTZ6|A7RTZ6_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g228742 PE=4 SV=1
Length = 241
Score = 117 bits (293), Expect(2) = 1e-36
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Frame = +3
Query: 93 INPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVRKN--- 263
++P N MP ANQ P+PGQ PLST R S+IPKGG+ D WVYPSPQMF+N++VRK
Sbjct: 33 LDPTNMMPP-ANQQPSPGQPFPLSTDRVVSSIPKGGSNDKWVYPSPQMFWNAMVRKGWKW 91
Query: 264 KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRPTDLT 443
+ DD+ DM ++ HN+ NE W +L+WE L+A+ +P+L+ F+GR D T
Sbjct: 92 EKDDLNPKDMGHIIKIHNANNERAWQEILKWEALHAKEC-----RNPKLISFKGRAQDFT 146
Query: 444 PKAYLKKFSG 473
+A ++ G
Sbjct: 147 IRARIRSLLG 156
Score = 60.5 bits (145), Expect(2) = 1e-36
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFY----YDESKDWPFF-VDVRPA-LDSPAAV 621
RS LG+ +PFDRHDWIVDR GR +RY+ID+Y D K F +DVRPA DS +
Sbjct: 152 RSLLGYELPFDRHDWIVDRCGRHVRYIIDYYDVGDEDAYKTGEFVELDVRPAPFDSFGSA 211
Query: 622 LLRANMVM 645
L R + M
Sbjct: 212 LDRMRVAM 219
>tr|Q7QFU4|Q7QFU4_ANOGA AGAP003843-PA OS=Anopheles gambiae
GN=AGAP003843 PE=4 SV=2
Length = 278
Score = 115 bits (289), Expect(2) = 1e-36
Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
Frame = +3
Query: 90 EINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKG---GTEDTWVYPSPQMFFNSLVRK 260
E+NP N MP ANQ PAPGQ PL T RQ S+IPK G ++ WVYPS QMF+N+++RK
Sbjct: 75 EVNPLNMMPP-ANQNPAPGQPFPLPTERQVSSIPKATTDGKQEFWVYPSQQMFWNAMLRK 133
Query: 261 N---KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGRP 431
+ DD+ + DMD ++ HN+ NE W +L+WE L+A E G +PRL F G+
Sbjct: 134 GWRWEKDDIAQKDMDDIIKIHNANNEQAWQEVLKWEALHAR---ECG--NPRLKSFGGKA 188
Query: 432 TDLTPKAYLKKFSG 473
TD +P+A ++ G
Sbjct: 189 TDYSPRAKIRNMMG 202
Score = 61.6 bits (148), Expect(2) = 1e-36
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESKDWPF---FVDVRPALDS 609
R+ +G+ +PFDRHDWI+DR G+++RYVID+Y D + +DVRPA+DS
Sbjct: 198 RNMMGYELPFDRHDWIIDRCGKDVRYVIDYYDGGMVDEKYKFALLDVRPAMDS 250
>tr|Q4RZJ2|Q4RZJ2_TETNG Chromosome undetermined SCAF14815, whole
genome shotgun sequence OS=Tetraodon nigroviridis
GN=GSTENG00026456001 PE=4 SV=1
Length = 221
Score = 112 bits (281), Expect(2) = 2e-36
Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Frame = +3
Query: 54 PQQDARPGGSFEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQ 233
P + AR G S +++P N MP NQVPAP Q PLS +R++STIP+ E+ WVYPS Q
Sbjct: 21 PMKAARRGQS--DVDPTNMMPP-PNQVPAPDQPFPLSVVREESTIPRFNNENNWVYPSEQ 77
Query: 234 MFFNSLVRKN---KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDP 404
MF+N+++RK + DD+T DM ++ HNS NE W +L+WE L+A P P
Sbjct: 78 MFWNAMLRKGWRWREDDLTPPDMSNIIKIHNSNNEQAWQEILKWEALHAGDCPCG----P 133
Query: 405 RLLHFRGRPTDLTPKAYLKKFSG 473
L F G+ + +P+A L+ + G
Sbjct: 134 TLKRFGGKAQEYSPRARLRHWMG 156
Score = 63.9 bits (154), Expect(2) = 2e-36
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESKDWPFF----VDVRPALDSPAAV 621
R ++G+ +PFDRHDWI+DR G+E+RYVID YYD D + +DVRPA DS AV
Sbjct: 152 RHWMGYELPFDRHDWIIDRCGKEVRYVID-YYDGDVDQDTYRFSILDVRPAFDSLGAV 208
>tr|Q6DCG6|Q6DCG6_XENLA Hccs-prov protein OS=Xenopus laevis GN=hccs
PE=2 SV=1
Length = 267
Score = 110 bits (274), Expect(2) = 3e-36
Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Frame = +3
Query: 78 GSFEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVR 257
G+ ++I+P+N MP NQ PAPGQ LS R++STIP+ TE W+YPS QMF+N+++R
Sbjct: 73 GAKDDIDPSNMMPP-PNQTPAPGQPFNLSLEREESTIPRSNTEKNWIYPSEQMFWNAMLR 131
Query: 258 KN---KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGR 428
K K DD+ +DM ++ HN NE WS + +WE L+A+ P P L+ F G+
Sbjct: 132 KGWRWKEDDLKPDDMANIIKIHNKNNEQAWSEIQKWEALHAKECPCG----PSLIRFGGK 187
Query: 429 PTDLTPKAYLKKFSG 473
+ +P+A ++ + G
Sbjct: 188 AKEYSPRARMRSWMG 202
Score = 66.2 bits (160), Expect(2) = 3e-36
Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 4/58 (6%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYD---ESKDWPF-FVDVRPALDSPAAV 621
RS++G+ +PFDRHDWIVDR GR++RYVID YYD K++ F +DVRPA DS +A+
Sbjct: 198 RSWMGYELPFDRHDWIVDRCGRKVRYVID-YYDGGVVDKNYQFTILDVRPAFDSMSAI 254
>tr|Q7ZTL8|Q7ZTL8_XENLA Hccs-prov protein OS=Xenopus laevis PE=2
SV=1
Length = 301
Score = 110 bits (274), Expect(2) = 6e-36
Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Frame = +3
Query: 78 GSFEEINPANRMPVHANQVPAPGQKEPLSTLRQKSTIPKGGTEDTWVYPSPQMFFNSLVR 257
G+ ++I+P+N MP NQ PAP Q LS R++STIP+ TE WVYPS QMF+N+++R
Sbjct: 107 GAKDDIDPSNMMPP-PNQTPAPDQPFSLSLDREESTIPRSSTEKNWVYPSEQMFWNAMLR 165
Query: 258 KN---KADDVTENDMDAVVATHNSVNEATWSRLLRWEQLYAEMYPESGREDPRLLHFRGR 428
K K DD+ DM ++ HN NE WS +L+WE L+A+ P P L+ F G+
Sbjct: 166 KGWRWKEDDLKPEDMTNIIKIHNKNNEQAWSEILKWEALHAKECPCG----PSLVRFGGK 221
Query: 429 PTDLTPKAYLKKFSG 473
+ +P+A ++ + G
Sbjct: 222 AKEFSPRARMRSWMG 236
Score = 65.1 bits (157), Expect(2) = 6e-36
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +1
Query: 460 RSFLGFGVPFDRHDWIVDRGGREMRYVIDFYYDESKDWPF---FVDVRPALDSPAAV 621
RS++G+ +PFDRHDWIVDR GR++RYVID+Y D + +DVRPA DS A+
Sbjct: 232 RSWMGYELPFDRHDWIVDRCGRKVRYVIDYYDGGEVDNNYQFSILDVRPAFDSMGAI 288
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