DK960771 |
Clone id |
TST39A01NGRL0008_E24 |
Library |
TST39 |
Length |
673 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_E24. 5' end sequence. |
Accession |
DK960771 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTCTGTACGTGTACAAAGAAGTATACCAACGTTGCAGCGCACGCTTGTAGACCATTCCTT CGGCAACCTTAGGCAGCGTCAGATTTTGCAAACAATCAGGAAGATCTTTTTGGGAAAAAT TTCCAGTGAGCAGCATGAGATTGATGTTGTAGCAAAGGATTTATTGGGCCGTGGGGTTGA GTCTTTTCGTGTCCCCTCCACTTTCACCCTTCATAACACACTTGAGATCTTGTTTAAAGA ATTTGTCAGTATGAGTTTCCTGTTTGGCAAGAAGAAGACACCCGCAGAGCTGCTGCGTGA AAATAAGCGCATGCTTGATAGGTCAATTCGAGAGATAGAGCGTGAAAGGCAAAGTCTACA AACGCAAGAGAAGAAGTTGATTGTAGAAATAAAAAAGACAGCAAAGCAAAACCAGATGGG TGCAGTGCGGGTTATGGCGAAGGATTTAATACGAACAAGACATCAAATTACTAAGTTTTA TGCATTGAAATCTCAATTGCAAGGGGTTTCTTTAAGAATACAGACATTGAAGTCAACACA ATCAATGGCAGAGGCAATGAAAGGTGTCACAAAAGCAATGAGACAAATGAATCGGCAGAT GAGTCTCCCTGGCATTCAGAAAATAATGCAGGAGTTTGAGAGGCAGAACGAGAGGATGGA GATGACTACGGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54DB1 |
Definition |
sp|Q54DB1|CM2A2_DICDI Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum |
Align length |
139 |
Score (bit) |
173.0 |
E-value |
9.0e-43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3TM11 |
Definition |
tr|B3TM11|B3TM11_ELAGV Breast adenocarcinoma marker-like OS=Elaeis guineensis var. tenera |
Align length |
141 |
Score (bit) |
228.0 |
E-value |
2.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960771|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_E24, 5' (673 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3TM11|B3TM11_ELAGV Breast adenocarcinoma marker-like OS=Elae... 228 2e-58 tr|B6TJP8|B6TJP8_MAIZE Charged multivesicular body protein 2a OS... 224 4e-57 tr|B6T4F7|B6T4F7_MAIZE Charged multivesicular body protein 2a OS... 224 4e-57 tr|B4FH14|B4FH14_MAIZE Putative uncharacterized protein OS=Zea m... 224 4e-57 tr|Q8H430|Q8H430_ORYSJ Os07g0236800 protein OS=Oryza sativa subs... 224 5e-57 tr|A9S6R4|A9S6R4_PHYPA Predicted protein OS=Physcomitrella paten... 223 7e-57 tr|A7PE04|A7PE04_VITVI Chromosome chr11 scaffold_13, whole genom... 222 2e-56 tr|A5AFU2|A5AFU2_VITVI Putative uncharacterized protein OS=Vitis... 222 2e-56 tr|B7FH94|B7FH94_MEDTR Putative uncharacterized protein OS=Medic... 221 3e-56 tr|B6TWF2|B6TWF2_MAIZE Charged multivesicular body protein 2a OS... 221 3e-56 tr|Q9SKI2|Q9SKI2_ARATH Expressed protein (Putative uncharacteriz... 218 4e-55 tr|Q8L915|Q8L915_ARATH Putative uncharacterized protein OS=Arabi... 218 4e-55 tr|Q762A5|Q762A5_ORYSJ BRI1-KD interacting protein 109 OS=Oryza ... 218 4e-55 tr|Q53NN3|Q53NN3_ORYSJ Charged multivesicular body protein 2a, p... 218 4e-55 tr|A2ZH12|A2ZH12_ORYSI Putative uncharacterized protein OS=Oryza... 218 4e-55 tr|A3BI26|A3BI26_ORYSJ Putative uncharacterized protein OS=Oryza... 210 8e-53 tr|A2YJQ0|A2YJQ0_ORYSI Putative uncharacterized protein OS=Oryza... 210 8e-53 tr|Q701J8|Q701J8_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701G8|Q701G8_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701E3|Q701E3_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701E1|Q701E1_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701E0|Q701E0_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701C5|Q701C5_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701B3|Q701B3_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701A4|Q701A4_ARATH Putative Snf7-like protein (Fragment) OS=... 198 3e-49 tr|Q701F9|Q701F9_ARATH Putative Snf7-like protein (Fragment) OS=... 197 7e-49 tr|Q701B7|Q701B7_ARATH Putative Snf7-like protein (Fragment) OS=... 197 7e-49 tr|Q00XW0|Q00XW0_OSTTA Charged multivesicular body protein 2a (I... 190 6e-47 tr|A8J9U3|A8J9U3_CHLRE Subunit of the ESCRT-III complex OS=Chlam... 185 2e-45 tr|B3TDD9|B3TDD9_SALSA Chromatin modifying protein 2a OS=Salmo s... 173 8e-42
>tr|B3TM11|B3TM11_ELAGV Breast adenocarcinoma marker-like OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 223
Score = 228 bits (582), Expect = 2e-58 Identities = 119/141 (84%), Positives = 125/141 (88%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSFLFGKKKTPAELLRENKRMLD+S Q LQTQEKKLI EIKK AKQ QMGAV+ Sbjct: 1 MSFLFGKKKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLITEIKKAAKQGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQ+M EAMKGVTKAM QMNRQM+LP Sbjct: 61 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 +QKIMQEFERQNERMEM +E Sbjct: 121 ALQKIMQEFERQNERMEMVSE 141
>tr|B6TJP8|B6TJP8_MAIZE Charged multivesicular body protein 2a OS=Zea mays PE=2 SV=1 Length = 223
Score = 224 bits (571), Expect = 4e-57 Identities = 114/141 (80%), Positives = 125/141 (88%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSFLFGK+KTPAELLRENKRMLDRS Q LQ QEKKLI EIKKTAK+ QMGAV+ Sbjct: 1 MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDLIRTRHQITKFY LKSQLQGVSLR+QTLKSTQ+M +AMKGVTKAM QMNRQ++LP Sbjct: 61 VMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMAQMNRQLNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 G+Q+IMQEFERQNERMEM +E Sbjct: 121 GLQRIMQEFERQNERMEMVSE 141
>tr|B6T4F7|B6T4F7_MAIZE Charged multivesicular body protein 2a OS=Zea mays PE=2 SV=1 Length = 223
Score = 224 bits (571), Expect = 4e-57 Identities = 114/141 (80%), Positives = 125/141 (88%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSFLFGK+KTPAELLRENKRMLDRS Q LQ QEKKLI EIKKTAK+ QMGAV+ Sbjct: 1 MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDLIRTRHQITKFY LKSQLQGVSLR+QTLKSTQ+M +AMKGVTKAM QMNRQ++LP Sbjct: 61 VMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMSQMNRQLNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 G+Q+IMQEFERQNERMEM +E Sbjct: 121 GLQRIMQEFERQNERMEMVSE 141
>tr|B4FH14|B4FH14_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 223
Score = 224 bits (571), Expect = 4e-57 Identities = 114/141 (80%), Positives = 125/141 (88%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSFLFGK+KTPAELLRENKRMLDRS Q LQ QEKKLI EIKKTAK+ QMGAV+ Sbjct: 1 MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDLIRTRHQITKFY LKSQLQGVSLR+QTLKSTQ+M +AMKGVTKAM QMNRQ++LP Sbjct: 61 VMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMAQMNRQLNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 G+Q+IMQEFERQNERMEM +E Sbjct: 121 GLQRIMQEFERQNERMEMVSE 141
>tr|Q8H430|Q8H430_ORYSJ Os07g0236800 protein OS=Oryza sativa subsp. japonica GN=P0407H12.144 PE=2 SV=1 Length = 225
Score = 224 bits (570), Expect = 5e-57 Identities = 114/141 (80%), Positives = 125/141 (88%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSFLFGK+KTPAELLRENKRMLDRS Q LQ QEKKLI EIKKTAK+ QMGAV+ Sbjct: 1 MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDLIRTRHQITKFY LKSQLQGVSLR+QTLKSTQ+M +AMKGVTKAM QMNRQ++LP Sbjct: 61 VMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMGQMNRQLNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 G+Q+IM EFERQNERMEMT+E Sbjct: 121 GLQRIMMEFERQNERMEMTSE 141
>tr|A9S6R4|A9S6R4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181789 PE=4 SV=1 Length = 229
Score = 223 bits (569), Expect = 7e-57 Identities = 118/142 (83%), Positives = 126/142 (88%), Gaps = 1/142 (0%) Frame = +2
Query: 251 MSF-LFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAV 427 MSF LFGKKKTPAELLRENKR LD+S Q+LQ QEKKLIVEIKKTAKQ QMGAV Sbjct: 1 MSFNLFGKKKTPAELLRENKRALDKSIREIERERQNLQNQEKKLIVEIKKTAKQGQMGAV 60
Query: 428 RVMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSL 607 +VMAKDLIRTRHQITKFY LKSQLQG+SLRIQTLKSTQ+MAEAMKGVTKAM QMNRQM+L Sbjct: 61 KVMAKDLIRTRHQITKFYGLKSQLQGISLRIQTLKSTQAMAEAMKGVTKAMGQMNRQMNL 120
Query: 608 PGIQKIMQEFERQNERMEMTTE 673 P +QKIM EFERQNE+MEMTTE Sbjct: 121 PALQKIMMEFERQNEKMEMTTE 142
>tr|A7PE04|A7PE04_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016482001 PE=4 SV=1 Length = 226
Score = 222 bits (565), Expect = 2e-56 Identities = 115/141 (81%), Positives = 124/141 (87%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSFLFGKKKTPAELLRENKRMLD+S Q LQ QEKKLIVEIKK+AKQ QMGAV+ Sbjct: 1 MSFLFGKKKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIVEIKKSAKQGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDLIRTRHQI KFY LKSQLQGV+LRIQTLKSTQ+M +AMKGVTKAM QMNRQM+LP Sbjct: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGQAMKGVTKAMGQMNRQMNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 +QKIMQEFERQNE+MEMT E Sbjct: 121 SLQKIMQEFERQNEKMEMTME 141
>tr|A5AFU2|A5AFU2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007913 PE=4 SV=1 Length = 226
Score = 222 bits (565), Expect = 2e-56 Identities = 115/141 (81%), Positives = 124/141 (87%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSFLFGKKKTPAELLRENKRMLD+S Q LQ QEKKLIVEIKK+AKQ QMGAV+ Sbjct: 1 MSFLFGKKKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIVEIKKSAKQGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDLIRTRHQI KFY LKSQLQGV+LRIQTLKSTQ+M +AMKGVTKAM QMNRQM+LP Sbjct: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGQAMKGVTKAMGQMNRQMNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 +QKIMQEFERQNE+MEMT E Sbjct: 121 SLQKIMQEFERQNEKMEMTME 141
>tr|B7FH94|B7FH94_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 223
Score = 221 bits (563), Expect = 3e-56 Identities = 113/141 (80%), Positives = 124/141 (87%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSF+FGK+KTPAELLRENKRMLD+S Q LQTQEKKLI EIKK+AKQ QMGAVR Sbjct: 1 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 VMAKDL+RTRHQI KFY LKSQLQGVSLRIQTLKSTQ+M EAMKGVTKAM QMNRQM+LP Sbjct: 61 VMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 +QKIMQ+FERQNE+ME+T E Sbjct: 121 NLQKIMQDFERQNEKMELTME 141
>tr|B6TWF2|B6TWF2_MAIZE Charged multivesicular body protein 2a OS=Zea mays PE=2 SV=1 Length = 224
Score = 221 bits (563), Expect = 3e-56 Identities = 114/141 (80%), Positives = 124/141 (87%) Frame = +2
Query: 251 MSFLFGKKKTPAELLRENKRMLDRSXXXXXXXXQSLQTQEKKLIVEIKKTAKQNQMGAVR 430 MSF+FGKKKTPAELLRENKRMLD+S Q LQTQEKKLI EIKK AKQ QMGAV+ Sbjct: 1 MSFIFGKKKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKVAKQGQMGAVK 60
Query: 431 VMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQSMAEAMKGVTKAMRQMNRQMSLP 610 +MAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQ+M EAMKGVTKAM QMNRQM+LP Sbjct: 61 IMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
Query: 611 GIQKIMQEFERQNERMEMTTE 673 +QKIM+EFE QNE+MEM +E Sbjct: 121 ALQKIMREFEMQNEKMEMVSE 141
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