DK960775 |
Clone id |
TST39A01NGRL0008_F04 |
Library |
TST39 |
Length |
688 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_F04. 5' end sequence. |
Accession |
DK960775 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TGCCATTCCTTGCTATTTTTGCCATTTTCCTTGCAAACACAATTTTTTGTGTGCTGTGGA GGTAGAGAGCTGCAAAGGCTATCAATTTTCTTGCAGAGAGATATTGCTTCAGCTAAGCCA CCATGCCAGAGGAGGAGAAGAAAGAGGATGACAAGATCATCCTGCAAGTGGACATGCATT GTGAGGGATGCAAGGCCAAGGTCAGAAAGGCGCTCAAGGAATTTAAAGGCATAGAAGCGC TGGATGTGAACATGCAAGACCAGAAGGTGACAATAAAAGGGAAGCTGGATGCCAGAACAG TGTATGAGACGGTGAAGAAGAAGAGTGGGAAGCGCACCATCTTACTCTACCCCGACCTCT CCAAAGTCCCCCAGGAGCCCAAGAAAGAGGAGCCAAAGAAAGAGGAGGTACCTACTTCAA CTCATCACCCATAATCAGTACCAAATTTTATGCAACTCTCTATAAATCAGTAAGAATTCT TTACTTCATTACACACATGCACGCGGGCACCACATGCATACACTGCTGACGGCCAATCCG ATTGCCCGTCTACCAACTCGGCATAATCATAGAATGAGGACTACGTCAAGTTTTCAAGGC ATGTGACTTTCTGCATATGAATGTATTATGCTAATAATCAATAATCATGCAGCATGCTAC CATAGATCTTTTGCTAGCCCATTGCATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XT28 |
Definition |
sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries |
Align length |
62 |
Score (bit) |
39.3 |
E-value |
0.02 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6ST82 |
Definition |
tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
61 |
Score (bit) |
65.1 |
E-value |
4.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960775|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_F04, 5' (688 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|B6SQL3|B6SQL3_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|B6SHX8|B6SHX8_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|A7R6F9|A7R6F9_VITVI Chromosome undetermined scaffold_1268, wh... 64 1e-08 tr|A7R6E7|A7R6E7_VITVI Chromosome undetermined scaffold_1259, wh... 64 1e-08 tr|A5B9B7|A5B9B7_VITVI Putative uncharacterized protein OS=Vitis... 64 1e-08 tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sat... 62 3e-08 tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subs... 62 3e-08 tr|Q5QL92|Q5QL92_ORYSJ cDNA clone:001-016-H06, full insert seque... 62 3e-08 tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|Q01LD6|Q01LD6_ORYSA OSIGBa0132D06.1 protein (OSIGBa0096P03.8 ... 62 3e-08 tr|B7FJ81|B7FJ81_MEDTR Putative uncharacterized protein OS=Medic... 62 3e-08 tr|Q7XKQ7|Q7XKQ7_ORYSJ Os04g0390100 protein OS=Oryza sativa subs... 61 6e-08 tr|A2XST7|A2XST7_ORYSI Putative uncharacterized protein OS=Oryza... 61 6e-08 tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea... 61 8e-08 tr|O82089|O82089_ARATH Copper homeostasis factor (AT3g56240/F18O... 60 1e-07 tr|A7PHJ6|A7PHJ6_VITVI Chromosome chr17 scaffold_16, whole genom... 60 1e-07 tr|Q70DK1|Q70DK1_HORVD Chopper chaperone OS=Hordeum vulgare var.... 60 1e-07 tr|B6U4D0|B6U4D0_MAIZE ATFP3 OS=Zea mays PE=2 SV=1 60 2e-07 tr|Q6ZCF3|Q6ZCF3_ORYSJ Os08g0205400 protein OS=Oryza sativa subs... 59 2e-07 tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populu... 59 2e-07 tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Popul... 59 2e-07 tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Popul... 59 2e-07 tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genom... 59 2e-07 tr|A2YSB2|A2YSB2_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A7QUV4|A7QUV4_VITVI Chromosome chr1 scaffold_180, whole genom... 59 3e-07 tr|Q9FLU5|Q9FLU5_ARATH Arabidopsis thaliana genomic DNA, chromos... 59 4e-07 tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana... 59 4e-07 tr|Q8S6Y3|Q8S6Y3_ORYSA Putative ATFP3 OS=Oryza sativa GN=OSJNBa0... 59 4e-07 tr|Q8L9K2|Q8L9K2_ARATH Putative uncharacterized protein OS=Arabi... 59 4e-07
>tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 112
Score = 65.1 bits (157), Expect = 4e-09 Identities = 28/61 (45%), Positives = 44/61 (72%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKR 335 ++L+V M CEGC VR+ L + +G+E D+++++QKVT+KG + V++TV KSGKR Sbjct: 7 VVLKVAMSCEGCAGAVRRVLSKMEGVETFDIDLKEQKVTVKGNVKPEDVFQTV-SKSGKR 65
Query: 336 T 338 T Sbjct: 66 T 66
>tr|B6SQL3|B6SQL3_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 112
Score = 65.1 bits (157), Expect = 4e-09 Identities = 28/61 (45%), Positives = 44/61 (72%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKR 335 ++L+V M CEGC VR+ L + +G+E D+++++QKVT+KG + V++TV KSGKR Sbjct: 7 VVLKVAMSCEGCAGAVRRVLSKMEGVETFDIDLKEQKVTVKGNVKPEDVFQTV-SKSGKR 65
Query: 336 T 338 T Sbjct: 66 T 66
>tr|B6SHX8|B6SHX8_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 111
Score = 65.1 bits (157), Expect = 4e-09 Identities = 28/61 (45%), Positives = 44/61 (72%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKR 335 ++L+V M CEGC VR+ L + +G+E D+++++QKVT+KG + V++TV KSGKR Sbjct: 7 VVLKVAMSCEGCAGAVRRVLSKMEGVETFDIDLKEQKVTVKGNVKPEDVFQTV-SKSGKR 65
Query: 336 T 338 T Sbjct: 66 T 66
>tr|A7R6F9|A7R6F9_VITVI Chromosome undetermined scaffold_1268, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008166001 PE=4 SV=1 Length = 145
Score = 63.5 bits (153), Expect = 1e-08 Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGK-LDARTVYETVKKKSGK 332 I+L+VDMHCE C KV +ALK F+G+E + + + KV +KGK D V E ++KKSG+ Sbjct: 38 IVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSGR 97
Query: 333 RTILLYP 353 + L+ P Sbjct: 98 KVELISP 104
>tr|A7R6E7|A7R6E7_VITVI Chromosome undetermined scaffold_1259, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008146001 PE=4 SV=1 Length = 145
Score = 63.5 bits (153), Expect = 1e-08 Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGK-LDARTVYETVKKKSGK 332 I+L+VDMHCE C KV +ALK F+G+E + + + KV +KGK D V E ++KKSG+ Sbjct: 38 IVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSGR 97
Query: 333 RTILLYP 353 + L+ P Sbjct: 98 KVELISP 104
>tr|A5B9B7|A5B9B7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038964 PE=4 SV=1 Length = 271
Score = 63.5 bits (153), Expect = 1e-08 Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGK-LDARTVYETVKKKSGK 332 I+L+VDMHCE C KV +ALK F+G+E + + + KV +KGK D V E ++KKSG+ Sbjct: 37 IVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSGR 96
Query: 333 RTILLYP 353 + L+ P Sbjct: 97 KVELISP 103
Score = 44.7 bits (104), Expect = 0.006 Identities = 16/63 (25%), Positives = 40/63 (63%) Frame = +3
Query: 159 ILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKRT 338 +L+V MHCE C +++ +++F G+E++ ++ + + +KG ++ + + V KK+ K+ Sbjct: 168 VLKVYMHCEACAQVLQRRIRKFPGVESVTTDVANDQAIVKGIIEPAKLVDYVNKKTRKQA 227
Query: 339 ILL 347 ++ Sbjct: 228 YIV 230
>tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sativa PE=2 SV=1 Length = 132
Score = 62.4 bits (150), Expect = 3e-08 Identities = 26/61 (42%), Positives = 43/61 (70%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKR 335 ++L+V M C+GC VR+ L + +G+E D++M+ QKVT+KG + V++TV K+GK+ Sbjct: 6 VVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTV-SKTGKK 64
Query: 336 T 338 T Sbjct: 65 T 65
>tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subsp. japonica GN=P0476H10.30-1 PE=4 SV=1 Length = 132
Score = 62.4 bits (150), Expect = 3e-08 Identities = 26/61 (42%), Positives = 43/61 (70%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKR 335 ++L+V M C+GC VR+ L + +G+E D++M+ QKVT+KG + V++TV K+GK+ Sbjct: 6 VVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTV-SKTGKK 64
Query: 336 T 338 T Sbjct: 65 T 65
>tr|Q5QL92|Q5QL92_ORYSJ cDNA clone:001-016-H06, full insert sequence OS=Oryza sativa subsp. japonica GN=P0476H10.30-2 PE=2 SV=1 Length = 252
Score = 62.4 bits (150), Expect = 3e-08 Identities = 26/61 (42%), Positives = 43/61 (70%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKR 335 ++L+V M C+GC VR+ L + +G+E D++M+ QKVT+KG + V++TV K+GK+ Sbjct: 126 VVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTV-SKTGKK 184
Query: 336 T 338 T Sbjct: 185 T 185
>tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07492 PE=4 SV=1 Length = 132
Score = 62.4 bits (150), Expect = 3e-08 Identities = 26/61 (42%), Positives = 43/61 (70%) Frame = +3
Query: 156 IILQVDMHCEGCKAKVRKALKEFKGIEALDVNMQDQKVTIKGKLDARTVYETVKKKSGKR 335 ++L+V M C+GC VR+ L + +G+E D++M+ QKVT+KG + V++TV K+GK+ Sbjct: 6 VVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTV-SKTGKK 64
Query: 336 T 338 T Sbjct: 65 T 65
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