BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960780|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_F09, 5'
         (684 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P62932|FBX40_MOUSE F-box only protein 40 OS=Mus musculus GN=F...    33   1.4  
sp|Q0VPD2|Y1518_ALCBS UPF0276 protein ABO_1518 OS=Alcanivorax bo...    31   7.0  

>sp|P62932|FBX40_MOUSE F-box only protein 40 OS=Mus musculus
           GN=Fbxo40 PE=2 SV=1
          Length = 710

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
 Frame = -2

Query: 341 PPA*SAKVAGVYTC*LCAPHEPFLYYSLVDCHVL--YYFHLCLFSAYTFPSP*EQCCC-- 174
           PPA      G +      P EP +   ++ CH+L    FH+C  S +T   P EQ  C  
Sbjct: 8   PPALHRHCEGCFNRHCHVPVEPSVSCLVISCHLLCGATFHMCKESEHTLLCPLEQVPCLN 67

Query: 173 -QLVCRAS--RHWPPLHAGTTPMRPLCFSL 93
            +  C  S  RH    H    P   +C S+
Sbjct: 68  SEYGCPLSMARHKLAKHLQVCPASVVCCSM 97


>sp|Q0VPD2|Y1518_ALCBS UPF0276 protein ABO_1518 OS=Alcanivorax
           borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
           GN=ABO_1518 PE=3 SV=1
          Length = 299

 Score = 30.8 bits (68), Expect = 7.0
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +3

Query: 465 TYLMQHML------ITYCIPHHHLIYLRHPPLFHRCLFYIAPRCRQM 587
           ++L QH +      ++YC  H HL  L   P     ++Y+A R RQ+
Sbjct: 90  SFLKQHNIRRYTEHLSYCSDHGHLYDLMPIPFTQEAVYYVADRIRQV 136

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960780|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_F09, 5'
         (684 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4XQF6|A4XQF6_PSEMY FMN-dependent alpha-hydroxy acid dehydrog...    34   7.6  
tr|B6MH40|B6MH40_BRAFL Putative uncharacterized protein OS=Branc...    34   7.7  
tr|A2YU54|A2YU54_ORYSI Putative uncharacterized protein OS=Oryza...    34   9.9  
tr|B6K928|B6K928_TOXGO 26S proteasome non-ATPase regulatory subu...    34   9.9  
tr|A7T0I7|A7T0I7_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   9.9  

>tr|A4XQF6|A4XQF6_PSEMY FMN-dependent alpha-hydroxy acid
           dehydrogenase OS=Pseudomonas mendocina (strain ymp)
           GN=Pmen_0804 PE=4 SV=1
          Length = 389

 Score = 34.3 bits (77), Expect = 7.6
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +2

Query: 86  YGRERSKAAAWAWYQRGGAASGGSLCIQAGSSTALMVRGKYMQRISTDGNSR 241
           Y RER    AWA Y  GGAA   SL     +   L +RG+ +Q +S  GN+R
Sbjct: 41  YARERMSEQAWA-YLAGGAADELSLADNRAAFERLRLRGRVLQDLS-GGNTR 90


>tr|B6MH40|B6MH40_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_123125 PE=4 SV=1
          Length = 498

 Score = 34.3 bits (77), Expect = 7.7
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 109 GRMGVVPAWRGGQWRLALHTSWQQHCSHGEGKVYAEN 219
           G+  V+PA R    R+  HT+W Q+  HG G+ Y E+
Sbjct: 15  GQASVIPAQRASYRRVCYHTNWSQY-RHGVGQFYPED 50


>tr|A2YU54|A2YU54_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28864 PE=4 SV=1
          Length = 216

 Score = 33.9 bits (76), Expect = 9.9
 Identities = 25/71 (35%), Positives = 31/71 (43%)
 Frame = +2

Query: 110 AAWAWYQRGGAASGGSLCIQAGSSTALMVRGKYMQRISTDGNSRGHDNQQESSKGMAHVE 289
           AA A      AAS  S    AGS    +V  K+      +GN  G D  Q ++   A  E
Sbjct: 36  AAAAAAAAAAAASAASSTAGAGSRGNNLVLFKWTPMNGANGNGGGGDGDQAAAAAAAAEE 95

Query: 290 HKASKCRRLPP 322
            KA+K RR  P
Sbjct: 96  EKATKRRRYVP 106


>tr|B6K928|B6K928_TOXGO 26S proteasome non-ATPase regulatory subunit
            2, putative OS=Toxoplasma gondii ME49 GN=TGME49_113410
            PE=4 SV=1
          Length = 1091

 Score = 33.9 bits (76), Expect = 9.9
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +3

Query: 396  VHNLYFLMKKIISSCVVHIMTPHTYLMQHMLITYCIPHHHLIYLRHPPLFHRCLFYIAP 572
            +H+  FL+  +   C+  IM  HT L  HM  T    +H+L+Y   P +  R LF +AP
Sbjct: 914  LHSDRFLINNVALGCLSVIM--HTCL--HMRTTILGKYHYLLYYLFPAMQPRMLFTVAP 968


>tr|A7T0I7|A7T0I7_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g64214 PE=4 SV=1
          Length = 256

 Score = 33.9 bits (76), Expect = 9.9
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +3

Query: 378 PALVLLVHNLYFLMKKIISSCVVHIMTPHTYLMQHMLITYCIPHHHLIYLRHPPLFHRCL 557
           P  +L  +  Y L+K  I  C++    P+  LM + + +YC+P H++ Y    P    CL
Sbjct: 46  PYCLLKPYIPYCLLKHYIPYCLLKHYIPYCLLMPY-IPSYCLPKHYIPYCLLKPYIPYCL 104

Query: 558 F-YIAPRC 578
             +  P C
Sbjct: 105 LKHYIPYC 112