DK960782
Clone id TST39A01NGRL0008_F11
Library
Length 219
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_F11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAAGAGATGATGGAGTTCTTCTACTTGACTTAAGTGCTTAGCTTCGTAGATGGCTCAAAT
CTGCAGAATAGGAGTTTGCTTCATACACTGTAACCATCACCTTCTTATCATGAATAATAG
CACAATGCATGAACCCCAATCATTGTGTTGTGGAAGAATGTGTTGGGATGCAATAAAAGA
TGGCATTATAGTCAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q04721
Definition sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens
Align length 54
Score (bit) 28.9
E-value 8.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960782|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_F11, 5'
(179 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 O... 29 8.3

>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2
OS=Homo sapiens GN=NOTCH2 PE=1 SV=3
Length = 2471

Score = 28.9 bits (63), Expect = 8.3
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +3

Query: 21 CLAS*MAQICRIGVCFIHCNHHLLIMNNS----TMHEPQSLCCGRM-CWDAIKD 167
CL+ A R GVC CN H + TM P + C + CWD I +
Sbjct: 1425 CLSQYCADKARDGVCDEACNSHACQWDGGDCSLTMENPWANCSSPLPCWDYINN 1478


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960782|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_F11, 5'
(179 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******