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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960786
Clone id TST39A01NGRL0008_F15
Library
Length 295
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_F15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GGGAAACAACATGCCCATAGAAGCCTGTACCTTTTGAATTTTTAATTTTTTCGTTCTGGC
TTTGAGGCTTAACAGTGCTGCGCACTTTTACCTTTTTGCATGTGTGAGCTAAACCGGGAA
AGGACATCATGATGATAGGACACGACCACGGTGCTGGGATCGAGGCCCTCCCTGGAATGA
AGGAGGACGGCTCAAACAAGTTCATTGAATACATAGAGGACTGCATCTCAATCGCAGATC
ACGCAAGTCAGAGCACCATGACCAAGTGTGCCCCGGAATGTGCATTTGAAGACCA
■■Homology search results ■■ -
sp_hit_id P40880
Definition sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare
Align length 49
Score (bit) 36.6
E-value 0.039
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960786|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_F15, 5'
         (295 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu...    37   0.039
sp|P21594|PYRF_TRIRE Orotidine 5'-phosphate decarboxylase OS=Tri...    32   0.74 
sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid...    32   0.97 
sp|O59958|CRE1_NEUCR DNA-binding protein cre-1 OS=Neurospora cra...    32   1.0  
sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian...    32   1.3  
sp|P19567|AZUP_ACHCY Pseudoazurin OS=Achromobacter cycloclastes ...    30   3.7  
sp|Q9Y3L3|3BP1_HUMAN SH3 domain-binding protein 1 OS=Homo sapien...    30   3.8  
sp|O94130|CREA_BOTFU DNA-binding protein creA OS=Botryotinia fuc...    30   5.0  
sp|O94131|CREA_GIBFU DNA-binding protein creA OS=Gibberella fuji...    29   8.5  
sp|Q01981|CREA_EMENI DNA-binding protein creA OS=Emericella nidu...    29   8.5  

>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum
           vulgare PE=2 SV=1
          Length = 324

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +3

Query: 126 IMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISIADHASQSTMTKCA 272
           I++IGH    GI+AL  +K DG++    ++ED + I   A +   T+CA
Sbjct: 220 IVVIGHSRCGGIKALLSLK-DGADDSFHFVEDWVRIGFPAKKKVQTECA 267


>sp|P21594|PYRF_TRIRE Orotidine 5'-phosphate decarboxylase
           OS=Trichoderma reesei GN=ura3 PE=3 SV=1
          Length = 381

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 185 LLHSREGLDPSTVVVSYHHDVLSRFSSHMQKGKSAQ 78
           LL+  + + PS VV+  H+D++S ++SH + G  AQ
Sbjct: 49  LLYLADKIGPSIVVLKTHYDMVSGWTSHPETGTGAQ 84


>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic
           OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2
          Length = 347

 Score = 32.0 bits (71), Expect = 0.97
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +3

Query: 120 KDIMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISIADHASQSTMTKCAPECAFED 293
           ++I++IGH    GI+ L     DG+N   ++IED + I   A    +++   + AFED
Sbjct: 220 ENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIEDWVKICLPAKSKVISELG-DSAFED 275


>sp|O59958|CRE1_NEUCR DNA-binding protein cre-1 OS=Neurospora crassa
           GN=cre-1 PE=2 SV=2
          Length = 430

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
 Frame = -1

Query: 223 QSSMYSMNLFEPSSFIPGRAS------IPAPWSCPIIMMSFPGLAHTCKKVKVRSTVKPQ 62
           ++ M ++ L  P+  +PG  +      +P P+ CP+   +F  L H  + ++  +  KP 
Sbjct: 47  EADMATVGLLRPNGPLPGAQATEPANELPRPYKCPLCDKAFHRLEHQTRHIRTHTGEKPH 106

Query: 61  S 59
           +
Sbjct: 107 A 107


>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana
           GN=CA2 PE=1 SV=2
          Length = 259

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +3

Query: 120 KDIMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISIADHASQSTMTKCAPECAFED 293
           ++I++IGH    GI+ L     DG+N   ++IED + I   A    + + +   AFED
Sbjct: 143 ENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIEDWVKICLPAKSKVLAE-SESSAFED 198


>sp|P19567|AZUP_ACHCY Pseudoazurin OS=Achromobacter cycloclastes
           GN=bcp PE=1 SV=2
          Length = 152

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +3

Query: 114 PGKDIMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISIADHASQSTMTKCAP 275
           PG  +  I  D G  +E + GM  DG+  F   I +   +   A      KC P
Sbjct: 55  PGDTVTFIPTDKGHNVETIKGMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP 108


>sp|Q9Y3L3|3BP1_HUMAN SH3 domain-binding protein 1 OS=Homo sapiens
           GN=SH3BP1 PE=1 SV=3
          Length = 701

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -1

Query: 238 SAIEMQSSMYSMNLFE--PSSFIPGRASIPAPWSCPIIMMSFPGLAHTCKKVKVRSTVKP 65
           SA+ +Q ++      E  PS+ +P  A+ PAP   P    + P LA    K +  S V P
Sbjct: 482 SAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPA-PALASAATKERTESEVPP 540

Query: 64  QSQNEKIKNS 35
           +  + K+  S
Sbjct: 541 RPASPKVTRS 550


>sp|O94130|CREA_BOTFU DNA-binding protein creA OS=Botryotinia
           fuckeliana GN=creA PE=3 SV=1
          Length = 435

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -1

Query: 229 EMQSSMYSMNLFEPSSFIPG-----RASIPAPWSCPIIMMSFPGLAHTCKKVKVRSTVKP 65
           + ++ M +M++  P+  + G     R  +P P+ CP+   +F  L H  + ++  +  KP
Sbjct: 42  QREAEMAAMSMMAPT-MVGGHHGDDRQDLPRPYKCPLCEKAFHRLEHQTRHIRTHTGEKP 100

Query: 64  QS 59
            +
Sbjct: 101 HA 102


>sp|O94131|CREA_GIBFU DNA-binding protein creA OS=Gibberella
           fujikuroi GN=CREA PE=3 SV=1
          Length = 420

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/63 (19%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = -1

Query: 229 EMQSSMYSMNLFEPSSFIPGRAS------IPAPWSCPIIMMSFPGLAHTCKKVKVRSTVK 68
           +++ +  ++ + +P+  +PG  +      +P P+ CP+   +F  L H  + ++  +  K
Sbjct: 31  DVEMATAAVTVIKPNGPLPGVQNSENSNELPRPYKCPLCDKAFHRLEHQTRHIRTHTGEK 90

Query: 67  PQS 59
           P +
Sbjct: 91  PHA 93


>sp|Q01981|CREA_EMENI DNA-binding protein creA OS=Emericella
           nidulans GN=creA PE=1 SV=1
          Length = 416

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 169 RASIPAPWSCPIIMMSFPGLAHTCKKVKVRSTVKPQS 59
           R  +P P+ CP+   +F  L H  + ++  +  KP +
Sbjct: 57  RQDLPRPYKCPLCERAFHRLEHQTRHIRTHTGEKPHA 93
tr_hit_id A8QD47
Definition tr|A8QD47|A8QD47_MALGO Putative uncharacterized protein OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
Align length 43
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960786|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_F15, 5'
         (295 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8QD47|A8QD47_MALGO Putative uncharacterized protein OS=Malas...    35   2.4  
tr|B1VK36|B1VK36_SOLLC Carbonic anhydrase OS=Solanum lycopersicu...    35   2.4  
tr|A9PEY8|A9PEY8_POPTR Carbonic anhydrase OS=Populus trichocarpa...    34   4.1  
tr|A9PED7|A9PED7_POPTR Carbonic anhydrase OS=Populus trichocarpa...    34   4.1  
tr|B1T4S3|B1T4S3_9BURK Pseudoazurin OS=Burkholderia ambifaria ME...    33   9.2  

>tr|A8QD47|A8QD47_MALGO Putative uncharacterized protein
           OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
           GN=MGL_4115 PE=4 SV=1
          Length = 1042

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -2

Query: 282 HIPGHTWSWCSDLRDLRLRCSPLCIQ*TCLSRPPSFQGGPRSQ 154
           H    T S  +DL + RLRCSP  +  T   RPP F   PR++
Sbjct: 322 HAKTETGSISADLEEERLRCSPTTLNSTDAPRPPKFVLKPRTK 364


>tr|B1VK36|B1VK36_SOLLC Carbonic anhydrase OS=Solanum lycopersicum
           GN=ca3 PE=2 SV=1
          Length = 255

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 20/58 (34%), Positives = 33/58 (56%)
 Frame = +3

Query: 120 KDIMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISIADHASQSTMTKCAPECAFED 293
           ++I++IGH    GI+AL  + EDGS    E+IE+ + I   A    + +  P  +FE+
Sbjct: 139 ENILVIGHSSCGGIKALMSLPEDGSES-TEFIENWVKIGLPAKAKVLAE-HPNISFEE 194


>tr|A9PEY8|A9PEY8_POPTR Carbonic anhydrase OS=Populus trichocarpa
           PE=2 SV=1
          Length = 256

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = +3

Query: 120 KDIMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISIADHASQSTMTKCAPECAFED 293
           ++I++IGH    GI+ L  + +DGS    ++IE+ + I   A++ST+ K A    FE+
Sbjct: 140 ENIVVIGHSCCGGIKGLMSIPDDGSTA-SDFIENWVKICS-AAKSTVAKKAGSLTFEE 195


>tr|A9PED7|A9PED7_POPTR Carbonic anhydrase OS=Populus trichocarpa
           PE=2 SV=1
          Length = 256

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = +3

Query: 120 KDIMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISIADHASQSTMTKCAPECAFED 293
           ++I++IGH    GI+ L  + +DGS    ++IE+ + I   A++ST+ K A    FE+
Sbjct: 140 ENIVVIGHSCCGGIKGLMSIPDDGSTA-SDFIENWVKICS-AAKSTVAKKAGSLTFEE 195


>tr|B1T4S3|B1T4S3_9BURK Pseudoazurin OS=Burkholderia ambifaria MEX-5
           GN=BamMEX5DRAFT_2789 PE=3 SV=1
          Length = 152

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 114 PGKDIMMIGHDHGAGIEALPGMKEDGSNKFIEYIEDCISI 233
           PG  +  +  D G  +E++PGM  DG+  F   I + +++
Sbjct: 50  PGDSVHFVAADSGHSVESIPGMAPDGARSFAGKISEDLTV 89