DK960790 |
Clone id |
TST39A01NGRL0008_F19 |
Library |
TST39 |
Length |
683 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_F19. 5' end sequence. |
Accession |
DK960790 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGATGGATGAAGGGTCTTAGGGGCAGGAAAAGATCAGAGAGGGAGGGAGGAGAGGAAAGT GCAGCAGCCATGGCTGCCGGCAATAATCCTGTAACGCTGCCGTTTTTGTTAACAGTAACC AGTATAGTGGTAGCAAGCTATAGCTGGAGCAGCACCGACGAAAGCCTGCCATTGTGGTGG AGCGCATACGGTCATCCACTGGTGTATGGGCCACGGTGGTTGGGCTTGCTGGCATTCCCC TTCTTGCAGCTGGTCATCCCCTACATCCTCTATCAAGTTGCATGCCACGACGAGAGGCTC GATGGCCAAAGTGGAGAGTCGGCAAATGCGGTGGCCAACATAATTGGGCTGCCATCCGTG CTGCTCTTTGCTCAGTACGTCACCGTCTACCTTCCGGTCGCGCTCAGCACCTCTCATGAT TTCCTGCCCCGCATATTCACCGCCAACCTCGCCATCTGGGCTCTCTTCTGGCTGGGCTAC AATTTGCAGTATGTGGAGCCAAACTCTTCAATCGGAGTTCCAATTTTTGTGCCTTTGTCG CAGAGTGAGATTTGGATGAGAACTCATCAGCGTTCTGGGCTTATGTTGATGGCATTTGGA ATTCTGCTTTTCATATTTGCATTGGCATGGCCCAATTGGGGTGGCGTATTTTGTGGTAGC ATTGGTGATCTGGCTAGGTGCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P30301 |
Definition |
sp|P30301|MIP_HUMAN Lens fiber major intrinsic protein OS=Homo sapiens |
Align length |
76 |
Score (bit) |
37.7 |
E-value |
0.057 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U2L6 |
Definition |
tr|A9U2L6|A9U2L6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
189 |
Score (bit) |
134.0 |
E-value |
4.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960790|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_F19, 5' (683 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U2L6|A9U2L6_PHYPA Predicted protein OS=Physcomitrella paten... 134 4e-30 tr|Q3SBB4|Q3SBB4_9EURY Predicted integral membrane protein (Frag... 54 1e-05 tr|O33653|O33653_STRIN ORF1 protein OS=Streptococcus iniae GN=OR... 51 6e-05 tr|Q72YN4|Q72YN4_BACC1 Membrane protein, putative OS=Bacillus ce... 50 1e-04 tr|A9WIZ6|A9WIZ6_CHLAA Putative uncharacterized protein OS=Chlor... 50 2e-04 tr|B2QID7|B2QID7_9CHLR Putative uncharacterized protein OS=Chlor... 50 2e-04 tr|A5KIH2|A5KIH2_9FIRM Putative uncharacterized protein OS=Rumin... 50 2e-04 tr|A3J427|A3J427_9FLAO Putative uncharacterized protein OS=Flavo... 50 2e-04 tr|Q0AKJ4|Q0AKJ4_MARMM Putative uncharacterized protein OS=Maric... 49 3e-04 tr|B7HTU4|B7HTU4_BACCE Conserved membrane protein YvaZ OS=Bacill... 49 3e-04 tr|Q5WBL5|Q5WBL5_BACSK Putative uncharacterized protein OS=Bacil... 49 4e-04 tr|Q812M5|Q812M5_BACCR Hypothetical Membrane Spanning Protein OS... 46 0.003 tr|B7AW83|B7AW83_9BACE Putative uncharacterized protein OS=Bacte... 46 0.003 tr|Q8DSW2|Q8DSW2_STRMU Putative uncharacterized protein OS=Strep... 45 0.003 tr|B7H9K7|B7H9K7_BACCE Conserved membrane protein YvaZ OS=Bacill... 45 0.003 tr|B0MGZ1|B0MGZ1_9FIRM Putative uncharacterized protein OS=Anaer... 45 0.004 tr|Q24S53|Q24S53_DESHY Putative uncharacterized protein OS=Desul... 45 0.006 tr|Q187V3|Q187V3_CLOD6 Putative membrane protein OS=Clostridium ... 45 0.006 tr|B8FWL2|B8FWL2_DESHD Putative uncharacterized protein OS=Desul... 45 0.006 tr|Q632K7|Q632K7_BACCZ Putative uncharacterized protein OS=Bacil... 44 0.007 tr|Q4MNC3|Q4MNC3_BACCE Putative uncharacterized protein OS=Bacil... 44 0.007 tr|B3KC61|B3KC61_9BACI Putative uncharacterized protein OS=Geoba... 44 0.007 tr|A8CU69|A8CU69_9CHLR Putative uncharacterized protein OS=Dehal... 44 0.010 tr|A4IPX7|A4IPX7_GEOTN Hypothetical membrane spanning Protein OS... 44 0.013 tr|B5V966|B5V966_BACCE Conserved membrane protein SdpI OS=Bacill... 44 0.013 tr|B4BNL5|B4BNL5_9BACI Putative uncharacterized protein OS=Geoba... 44 0.013 tr|A1ZQ97|A1ZQ97_9SPHI Membrane protein, putative OS=Microscilla... 44 0.013 tr|Q3ZYC2|Q3ZYC2_DEHSC Conserved hypothetical membrane protein O... 43 0.016 tr|A1A1U2|A1A1U2_BIFAA Putative membrane protein OS=Bifidobacter... 43 0.016 tr|Q3EYF5|Q3EYF5_BACTI Hypothetical membrane spanning protein OS... 43 0.016
>tr|A9U2L6|A9U2L6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173334 PE=4 SV=1 Length = 297
Score = 134 bits (338), Expect = 4e-30 Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 5/189 (2%) Frame = +1
Query: 82 NNPVTLPFLLTVTSIVVASYSWSSTD-ESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVI 258 ++PV L LL + S+ + Y+ S LP+WW +G+P +YGPRW+ LL+ P L L++ Sbjct: 3 SSPVVLAVLLFLGSLAITLYNAHSAPWHHLPIWWDLFGNPWIYGPRWVALLSVPVLTLLV 62
Query: 259 PYILYQVACHDERLDGQSGESANAVANIIGLPSVLLFAQYVTVYLPVALSTSHDFLPRIF 438 P A + L S +V NII LP++ LF V LP SH F RIF Sbjct: 63 PLFYNMAALRNYNLLHHGAASKQSVFNIIVLPALFLFTIQAYVILPAETDPSHKFPARIF 122
Query: 439 TANLAIWALFWLGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGILLFIF 618 +N AIW L W G+NL+YVE N+ +G I P + W H ++GL+ G LLFI Sbjct: 123 VSNTAIWVLVWFGHNLKYVEQNNVVG--IISPWTTDANWDALHSQAGLIFELCGTLLFIL 180
Query: 619 A----LAWP 633 + + WP Sbjct: 181 SFVVPIGWP 189
>tr|Q3SBB4|Q3SBB4_9EURY Predicted integral membrane protein (Fragment) OS=uncultured euryarchaeote Alv-FOS5 PE=4 SV=1 Length = 206
Score = 53.5 bits (127), Expect = 1e-05 Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 6/180 (3%) Frame = +1
Query: 103 FLLTVTSIVVASYSWSSTDESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPYILYQVA 282 +L+ + + ++ ++ + W A G Y P+ G FP + LV+ I + + Sbjct: 1 WLIVILAFIIGLIAYPHMPAKVASHWGASGAVNGYMPKTWGTFIFPLIMLVMGVIFFLIP 60
Query: 283 CHDERLDGQSGESANAVANIIGLPSVLLFAQYVTVYLPVALSTSHDFLPRIFTANLAIWA 462 D + +G LL T+ + T+ + +F+A L + Sbjct: 61 RIDPKRRNYREFKGYYWGLFLGFELFLLVVFLFTILWNLGYHTN---VNSVFSALLGFF- 116
Query: 463 LFWLGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLM------LMAFGILLFIFAL 624 + +G+ +++V+PN IG+ LS E+W +TH+ L+ + FG+LL FA+ Sbjct: 117 IIGIGFFIEHVKPNWFIGIRTPWTLSNEEVWRKTHRLGSLLFKVSGVIALFGVLLTKFAI 176
>tr|O33653|O33653_STRIN ORF1 protein OS=Streptococcus iniae GN=ORF1 PE=4 SV=1 Length = 210
Score = 51.2 bits (121), Expect = 6e-05 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 1/181 (0%) Frame = +1
Query: 85 NPVTLPFLLTVTSIVVASYSWSSTDESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPY 264 N + + L+ + IV+ W E + + G P Y ++ + P + L+ Sbjct: 6 NVLLITSLIVLLPIVIGLLLWRQLPEQIATHFDFSGKPDGYSSKFEAVFFLPGVMLLTHL 65
Query: 265 ILYQVACHDERLDGQSGESANAVANIIGLPSVLLFAQYVTVYLPVALSTSHDFLPRIFTA 444 + D + G G+ + + I+ P + +FAQ + V L S +F A Sbjct: 66 FCIWLTSKDPK-SGGLGKMQHLIYWIV--PVISIFAQSM-----VFLVASGFTKISVFNA 117
Query: 445 NLAIWALFW-LGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGILLFIFA 621 NL + LF LG L V N ++G+ + L+ W +TH+ +G + + G+ LFIF Sbjct: 118 NLFLGLLFLVLGNYLPKVRQNYTVGIKLPWTLNDETNWNKTHRLAGKLWVVGGLALFIFG 177
Query: 622 L 624 L Sbjct: 178 L 178
>tr|Q72YN4|Q72YN4_BACC1 Membrane protein, putative OS=Bacillus cereus (strain ATCC 10987) GN=BCE_4987 PE=4 SV=1 Length = 212
Score = 50.4 bits (119), Expect = 1e-04 Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 8/197 (4%) Frame = +1
Query: 100 PFLLTVTSIVVASYSWSSTDESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPYILYQV 279 P LL +I+ +W + E +P W+ G + + G++ F +V Y L V Sbjct: 7 PLLLIALTIIAWCVAWPNLPEEVPSHWNVSGEVDGHMSKMGGMI-FDVAIMVFIYALLTV 65
Query: 280 ACHDERLDGQ--SGESANAVANIIGLPSVLLFAQYVTVYLPVALSTSHDFLPRIFTANLA 453 ++D + + + + N+I SVL+ V + + + +D +P T ++ Sbjct: 66 L---PKIDPKYKNYDKFSKGYNVINY-SVLILLFLVNI-IGIGAGLGYD-IPMNSTPHIL 119
Query: 454 IWALFW-LGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGI--LLFIFA- 621 + LF +G L +PN +G+ LS E+W +TH+ SG + + G+ +L IFA Sbjct: 120 VGLLFIVIGNYLPQCKPNYFVGIKTPWTLSNEEVWRKTHRFSGKVFVVLGVIMILSIFAP 179
Query: 622 LAWPNW--GGVFCGSIG 666 +AW + G+ G++G Sbjct: 180 VAWKGFLIIGIIVGAVG 196
>tr|A9WIZ6|A9WIZ6_CHLAA Putative uncharacterized protein OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_3267 PE=4 SV=1 Length = 213
Score = 49.7 bits (117), Expect = 2e-04 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 2/163 (1%) Frame = +1
Query: 151 STDESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPYILYQVACHDERLDGQSGESANA 330 S + P+ W+A G YG W+ L P + ++ + + D R G +G Sbjct: 24 SIPDPAPIHWNAVGEVDGYGSPWIVALLPPIMATIMALLALVLPRIDPRGQGYTGFFRTY 83
Query: 331 VANIIGLPSVLLFA--QYVTVYLPVALSTSHDFLPRIFTANLAIWALFWLGYNLQYVEPN 504 + L VL FA Q +T+ + V S +PR+ + +++ + LG L V PN Sbjct: 84 ALIMNSL--VLFFAGLQVITIGVAVGWPVS---VPRLLSVGMSLLIIV-LGNELGRVTPN 137
Query: 505 SSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGILLFIFALAWP 633 +G+ L+ ++W +TH+ + +A G L + +L P Sbjct: 138 YFVGIRTPWTLADPDVWRKTHRVGARLFVAGGGLAALSSLVVP 180
>tr|B2QID7|B2QID7_9CHLR Putative uncharacterized protein OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_0662 PE=4 SV=1 Length = 213
Score = 49.7 bits (117), Expect = 2e-04 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 2/163 (1%) Frame = +1
Query: 151 STDESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPYILYQVACHDERLDGQSGESANA 330 S + P+ W+A G YG W+ L P + ++ + + D R G +G Sbjct: 24 SIPDPAPIHWNAVGEVDGYGSPWIVALLPPIMATIMALLALVLPRIDPRGQGYTGFFRTY 83
Query: 331 VANIIGLPSVLLFA--QYVTVYLPVALSTSHDFLPRIFTANLAIWALFWLGYNLQYVEPN 504 + L VL FA Q +T+ + V S +PR+ + +++ + LG L V PN Sbjct: 84 ALIMNSL--VLFFAGLQVITIGVAVGWPVS---VPRLLSVGMSLLIIV-LGNELGRVTPN 137
Query: 505 SSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGILLFIFALAWP 633 +G+ L+ ++W +TH+ + +A G L + +L P Sbjct: 138 YFVGIRTPWTLADPDVWRKTHRVGARLFVAGGGLAALSSLVVP 180
>tr|A5KIH2|A5KIH2_9FIRM Putative uncharacterized protein OS=Ruminococcus torques ATCC 27756 GN=RUMTOR_00017 PE=4 SV=1 Length = 216
Score = 49.7 bits (117), Expect = 2e-04 Identities = 39/177 (22%), Positives = 75/177 (42%) Frame = +1
Query: 91 VTLPFLLTVTSIVVASYSWSSTDESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPYIL 270 + + L+T+ IV+ + W+ ++L W + G + + + P + I + Sbjct: 8 IIITTLITLLPIVIGLFLWNKLPDTLATHWGSDGTANGWSSKTFSVFGMPLILTAIHVLC 67
Query: 271 YQVACHDERLDGQSGESANAVANIIGLPSVLLFAQYVTVYLPVALSTSHDFLPRIFTANL 450 V +D + + +A I L V+ + YL +AL DF IF + L Sbjct: 68 LFVTLNDPK---KKNIHKKPMALIFWLVPVISLLANCSTYL-IALGV--DFSIEIFISAL 121
Query: 451 AIWALFWLGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGILLFIFA 621 LG + ++ N +IG+ + L+ E W RTH+ G + + GI + + + Sbjct: 122 IGVFFIVLGNYMPKLQQNYTIGIKLPWTLNSEENWNRTHRLGGKLYIVMGIAMILMS 178
>tr|A3J427|A3J427_9FLAO Putative uncharacterized protein OS=Flavobacteria bacterium BAL38 GN=FBBAL38_06930 PE=4 SV=1 Length = 213
Score = 49.7 bits (117), Expect = 2e-04 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 8/179 (4%) Frame = +1
Query: 97 LPFL-LTVTSIVVASYSWSSTDESLPLWWSAYGHPLVYGPR-WLGLLAFP------FLQL 252 +PF+ + + V +Y W S ES+P+ W+ G YG + L L+ F F+ L Sbjct: 8 IPFIAVALLPFVYLAYIWKSLPESVPMHWNGAGEIDRYGDKNELLLMIFMLTGISYFIFL 67
Query: 253 VIPYILYQVACHDERLDGQSGESANAVANIIGLPSVLLFAQYVTVYLPVALSTSHDFLPR 432 +IPYI D + Q+ N + N+ + ++ + A + + V TS+ L Sbjct: 68 IIPYI-------DPKQKLQN--MGNKLNNLRLILALFMSALAIYILYSVQQKTSNPVL-- 116
Query: 433 IFTANLAIWALFWLGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGILL 609 IF ++A +LG + ++PN IG+ L ++W +TH G + G+L+ Sbjct: 117 IFPLVGLLFA--FLGNYFKTIKPNYFIGIKTPWTLENEDVWKKTHVMGGKLWFVGGLLM 173
>tr|Q0AKJ4|Q0AKJ4_MARMM Putative uncharacterized protein OS=Maricaulis maris (strain MCS10) GN=Mmar10_2918 PE=3 SV=1 Length = 230
Score = 48.9 bits (115), Expect = 3e-04 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 7/175 (4%) Frame = +1
Query: 106 LLTVTSIVVASYSWSSTDES--LPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPYILYQV 279 L ++V+A W TD + +P+ W G P YG R P + + + + Sbjct: 10 LFIALALVLAGLGWLGTDATTQIPVHWGIDGQPDRYGGRLEAFFLLPAIMAGLSVLFAVL 69
Query: 280 ACHDERLDGQSGESANAVANII--GLPSVLLFAQYVTVYLPVALSTSHD--FLPR-IFTA 444 D R G++ E + V + G+ ++LL Q + V L ++ D +P I TA Sbjct: 70 PSIDPR--GRNLERSRIVLQTVWMGVLALLLLVQTILVGLGLSWIEPADETLVPTLILTA 127
Query: 445 NLAIWALFWLGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGILL 609 A++ L LG L PN +G+ LS W +TH+ +G +++A G+++ Sbjct: 128 VGALYVL--LGNVLGKARPNWFVGIRTPWTLSSDLSWDKTHRLTGRLMVAGGLVM 180
>tr|B7HTU4|B7HTU4_BACCE Conserved membrane protein YvaZ OS=Bacillus cereus AH187 GN=BCAH187_A4974 PE=4 SV=1 Length = 212
Score = 48.9 bits (115), Expect = 3e-04 Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 8/197 (4%) Frame = +1
Query: 100 PFLLTVTSIVVASYSWSSTDESLPLWWSAYGHPLVYGPRWLGLLAFPFLQLVIPYILYQV 279 P LL +I+ +W + E +P W+ G + + G++ F +V Y L V Sbjct: 7 PLLLIALTIIAWCVAWPNLPEEVPSHWNVSGEVDGHMSKMGGMI-FDVAIMVFIYALLTV 65
Query: 280 ACHDERLDGQ--SGESANAVANIIGLPSVLLFAQYVTVYLPVALSTSHDFLPRIFTANLA 453 ++D + + + + N+I SVL+ V + + + ++ +P T ++ Sbjct: 66 L---PKIDPKYKNYDKFSKGYNVINY-SVLILLFLVNI-IGIGAGLGYE-IPMNSTPHIL 119
Query: 454 IWALFW-LGYNLQYVEPNSSIGVPIFVPLSQSEIWMRTHQRSGLMLMAFGI--LLFIFA- 621 + LF +G L +PN +G+ LS E+W +TH+ SG + + G+ +L IFA Sbjct: 120 VGLLFIVIGNYLPQCKPNYFVGIKTPWTLSNEEVWRKTHRFSGKVFVVLGVIMILSIFAP 179
Query: 622 LAWPNW--GGVFCGSIG 666 +AW + G+ G++G Sbjct: 180 VAWKGFLIIGIIVGAVG 196
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