BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960803|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G08, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q69566|U88_HHV6U Uncharacterized protein U88 OS=Human herpesv...    36   0.15 
sp|Q3ZY29|HIS6_DEHSC Imidazole glycerol phosphate synthase subun...    32   2.8  
sp|A5FQI9|HIS6_DEHSB Imidazole glycerol phosphate synthase subun...    32   2.8  
sp|Q0V9N0|S14L5_XENTR SEC14-like protein 5 OS=Xenopus tropicalis...    31   6.2  

>sp|Q69566|U88_HHV6U Uncharacterized protein U88 OS=Human
           herpesvirus 6A (strain Uganda-1102) GN=U88 PE=4 SV=1
          Length = 413

 Score = 36.2 bits (82), Expect = 0.15
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -3

Query: 474 SINLIIKFRAKIRP*VCSXXXXXXXXTIRIC---RACIQKRLCFNKRIAER---CADICI 313
           S+ + ++    +R  VC+          R+C   R C+  R+C   R+  R   CA +C+
Sbjct: 64  SVRVSVRVSVSVRVSVCARVCARVCVCARVCVCARVCVCARVCVCARVCARVCVCACVCV 123

Query: 312 SYCICL 295
             C+C+
Sbjct: 124 CACLCV 129


>sp|Q3ZY29|HIS6_DEHSC Imidazole glycerol phosphate synthase subunit
           hisF OS=Dehalococcoides sp. (strain CBDB1) GN=hisF PE=3
           SV=1
          Length = 253

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 219 REVATQTTVARAGQDKSWAQHSPSSAPQTIAATNSVFGRRC 97
           R +A  TT+ RAG DK     +  S P  I+     FGR+C
Sbjct: 84  RSIADMTTLLRAGADKVSVNSAAVSDPDLISRGAEKFGRQC 124


>sp|A5FQI9|HIS6_DEHSB Imidazole glycerol phosphate synthase subunit
           hisF OS=Dehalococcoides sp. (strain BAV1) GN=hisF PE=3
           SV=1
          Length = 253

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 219 REVATQTTVARAGQDKSWAQHSPSSAPQTIAATNSVFGRRC 97
           R +A  TT+ RAG DK     +  S P  I+     FGR+C
Sbjct: 84  RSIADMTTLLRAGADKVSVNSAAVSDPDLISRGAEKFGRQC 124


>sp|Q0V9N0|S14L5_XENTR SEC14-like protein 5 OS=Xenopus tropicalis
           GN=sec14l1 PE=2 SV=1
          Length = 707

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
 Frame = -2

Query: 580 WVRSRH-------QHTHRSSLQRDHQKECGEGAEAHSVSWY*QHKPDNQIQGQNQALSLQ 422
           W++  H       +H  R    RD   E        S+SW  QH+ D  +Q       L+
Sbjct: 261 WLQETHKGKIPKDEHILRFLRARDFNMEKAREMLCQSLSWRKQHQVDYILQTWQPPRVLE 320

Query: 421 RDWDWGWRYH 392
             +  GW YH
Sbjct: 321 EYYAGGWHYH 330

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960803|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G08, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4SJX6|A4SJX6_AERS4 Cold-shock protein, DNA-binding OS=Aeromo...    35   3.9  
tr|B7FTA9|B7FTA9_PHATR Predicted protein (Fragment) OS=Phaeodact...    35   3.9  

>tr|A4SJX6|A4SJX6_AERS4 Cold-shock protein, DNA-binding OS=Aeromonas
           salmonicida (strain A449) GN=cspC PE=4 SV=1
          Length = 219

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 18/72 (25%), Positives = 33/72 (45%)
 Frame = -2

Query: 628 SSFLGT*GSYWWASPVWVRSRHQHTHRSSLQRDHQKECGEGAEAHSVSWY*QHKPDNQIQ 449
           SSF+G  GS   ++P         T   S Q D ++ C +       +W+ +H P+ ++ 
Sbjct: 153 SSFIGDEGSASRSTP--------QTSALSYQCDGREYCSQMTSCEEATWFLRHCPNTKMD 204

Query: 448 GQNQALSLQRDW 413
           G+   +  +R W
Sbjct: 205 GEGDGVPCERQW 216


>tr|B7FTA9|B7FTA9_PHATR Predicted protein (Fragment)
           OS=Phaeodactylum tricornutum CCAP 1055/1
           GN=PHATRDRAFT_43741 PE=4 SV=1
          Length = 504

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +1

Query: 136 LRGRRRAVLRPTLILSCPRDCSLRSDFSLLSVKLTSSTARFSGVILSQGNFTGQANAVAD 315
           +R  R+++ RP  + SCP D   R+        L+S  +  S  ILS   F   +NA+AD
Sbjct: 1   MRSVRKSMARP--VSSCPTDAGTRASIDRQGCLLSSYQSTSSWQILSVRRFAAMSNALAD 58

Query: 316 ANVSATFSNPLV 351
             V    + P V
Sbjct: 59  LRVLNRRTIPFV 70