DK960806
Clone id TST39A01NGRL0008_G11
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_G11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CACACACACACACACAGAAACGCACGGAGGCAGACACACAATCCTACTGTAGTGGAGCGG
TTTTGTTTGCATATTAAGTTTGTGCGCCTGTGAAGGAAAAGGCTACTCCTCACGCTAACC
CATTAGTTCTATGCTAGATGGCTTCACAAGGAAAGAAGAAGAACAGGGGTAAAAACGCTG
AACCTGACCCCGATGATGTGGATTCAGAGCTCTCTGTGACGTTCGATGACAATGGCCCAG
CTGCTGCAACCAAGAAGAAAGGTAAAAAAGGGAAGAAAGGTCTATCAGTAGACGATGATG
AATACGATGTTTCAGCTCTTGATGGCAATAAGCCAGAGCTTTCTGCAAACATTGGTGACA
ATGGTGTTGCACCTTTGAAAAAAGGTAAGAAGGGCAAGAAGGGATTGCCCGTGGATGATG
ATGAGTACGATGTCTCAACTGTCGATGATGACAAATCTGTTCAGTCCATTGAGTCTGCTC
CGTCCCGTGATGGTTCGAAAAGGGGAAAGAAAGGAAAGCAAGCCACAAGAGGTAGAGATG
ATGACGATGATGATGAAC
■■Homology search results ■■ -
sp_hit_id Q7TN75
Definition sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=Mus musculus
Align length 72
Score (bit) 30.4
E-value 6.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960806|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G11, 5'
(558 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=M... 30 6.2
sp|Q54J34|PUR8_DICDI Adenylosuccinate lyase OS=Dictyostelium dis... 30 8.0
sp|Q62565|SRY_MUSSI Sex-determining region Y protein OS=Mus spic... 30 8.1

>sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=Mus
musculus GN=Peg10 PE=1 SV=2
Length = 958

Score = 30.4 bits (67), Expect = 6.2
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Frame = -1

Query: 387 YLFSKVQHHC----HQCLQKAL-AYCHQELKHRIHHRLLIDLSSLF--YLSSWLQQLGHC 229
+L+ + HH H+ L + L Y HQ L +HH L DL YL + + H
Sbjct: 609 HLYPVMHHHLPPDQHEHLHEYLHQYLHQYLHQFLHHHLHPDLHQYLYQYLHNHMNPDPHH 668

Query: 228 HRTSQRALNPHH 193
H +PHH
Sbjct: 669 HPHPDPPQDPHH 680


>sp|Q54J34|PUR8_DICDI Adenylosuccinate lyase OS=Dictyostelium
discoideum GN=purB PE=3 SV=1
Length = 466

Score = 30.0 bits (66), Expect = 8.0
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -2

Query: 413 HGQSLLALLTFFQRCNTIVTNVCRKLW 333
H ++ +LL F+R NTI+ ++CR +W
Sbjct: 262 HYDNVASLLDAFKRINTILIDLCRDIW 288


>sp|Q62565|SRY_MUSSI Sex-determining region Y protein OS=Mus
spicilegus GN=Sry PE=3 SV=2
Length = 311

Score = 30.0 bits (66), Expect = 8.1
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = -1

Query: 366 HHCHQCLQKALAYCHQELKHRIHHRLLIDLSSLFYLSSWLQQLGHCHRTSQRALNPHHRG 187
H HQ Q+ + H + K + H + QQ H H+ Q+ L+ HH
Sbjct: 162 HDHHQQQQQQQFHDHHQQKQQFHDHQQQQQQFHDHHHHQQQQQFHDHQQQQQQLHNHHHQ 221

Query: 186 QVQRFY 169
Q Q+F+
Sbjct: 222 QQQQFH 227


tr_hit_id Q7ZXV4
Definition tr|Q7ZXV4|Q7ZXV4_XENLA Dyrk1a-prov protein OS=Xenopus laevis
Align length 70
Score (bit) 36.6
E-value 0.95
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960806|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G11, 5'
(558 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7ZXV4|Q7ZXV4_XENLA Dyrk1a-prov protein OS=Xenopus laevis GN=... 37 0.95
tr|B1H2N4|B1H2N4_XENTR Dyrk1a.2 protein OS=Xenopus tropicalis GN... 37 0.95
tr|A5ACY3|A5ACY3_VITVI Putative uncharacterized protein OS=Vitis... 34 6.2
tr|A3UG29|A3UG29_9RHOB Putative uncharacterized protein OS=Ocean... 33 7.9
tr|B2ARC3|B2ARC3_PODAN Predicted CDS Pa_4_7975 OS=Podospora anse... 33 7.9
tr|A5B595|A5B595_VITVI Putative uncharacterized protein OS=Vitis... 33 8.1

>tr|Q7ZXV4|Q7ZXV4_XENLA Dyrk1a-prov protein OS=Xenopus laevis
GN=dyrk1a.2 PE=2 SV=1
Length = 671

Score = 36.6 bits (83), Expect = 0.95
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = -1

Query: 402 PSCPSYLFSKVQHHCHQCLQKALAYCHQELKHRIHHRLLIDLSSLFYLSSWLQQLGHCHR 223
PS P + HH H Y H H +HR LI SS S LGH H
Sbjct: 534 PSQPQHFHGNEPHHPHPL------YHHVNRPH--YHRQLITSSSPQIPESMELSLGHRHP 585

Query: 222 TSQRALNPHH 193
S +L+PHH
Sbjct: 586 QSSSSLHPHH 595


>tr|B1H2N4|B1H2N4_XENTR Dyrk1a.2 protein OS=Xenopus tropicalis
GN=dyrk1a.2 PE=2 SV=1
Length = 671

Score = 36.6 bits (83), Expect = 0.95
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = -1

Query: 402 PSCPSYLFSKVQHHCHQCLQKALAYCHQELKHRIHHRLLIDLSSLFYLSSWLQQLGHCHR 223
PS P + HH H Y H H +HR LI SS S LGH H
Sbjct: 534 PSQPQHFHGNEPHHPHPL------YHHVNRPH--YHRQLITSSSPQIPESMELSLGHRHP 585

Query: 222 TSQRALNPHH 193
S +L+PHH
Sbjct: 586 QSSSSLHPHH 595


>tr|A5ACY3|A5ACY3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_004606 PE=4 SV=1
Length = 1110

Score = 33.9 bits (76), Expect = 6.2
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = -1

Query: 396 CPSYLFSKVQHHCHQCLQKALAYCHQELKHRIHHRLLIDLSSLFYLSS-WLQQLGHCHRT 220
CP + S + H CL + L C + + +I L ++ L Y +++ R
Sbjct: 420 CPVVISSALTIHQEDCLLEVLRICKKAIGWQISD--LKWINPLVYTHHIYMEDEAKPVRQ 477

Query: 219 SQRALNPHHRGQVQRFYPCSSSFLVKPSSI 130
SQR LNPH + YP S V P+ +
Sbjct: 478 SQRRLNPHMQEVASIIYPILDSPWVSPTQV 507


>tr|A3UG29|A3UG29_9RHOB Putative uncharacterized protein
OS=Oceanicaulis alexandrii HTCC2633 GN=OA2633_06049 PE=4
SV=1
Length = 127

Score = 33.5 bits (75), Expect = 7.9
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3

Query: 138 MASQGKKKNRGK-NAEPDPDDVDSELSVTFDDNGPAA 245
+AS+ K+K++ K + PDPDD D +L DD+ PA+
Sbjct: 81 LASEDKEKSKKKPDDSPDPDDEDDKLDDALDDSFPAS 117


>tr|B2ARC3|B2ARC3_PODAN Predicted CDS Pa_4_7975 OS=Podospora
anserina PE=4 SV=1
Length = 401

Score = 33.5 bits (75), Expect = 7.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3

Query: 144 SQGKKKNRGKNAEPDPDDVDSELS 215
S+GKKK +GK PD DD D ELS
Sbjct: 315 SRGKKKGKGKGTVPDYDDGDEELS 338


>tr|A5B595|A5B595_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_019905 PE=4 SV=1
Length = 1705

Score = 33.5 bits (75), Expect = 8.1
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Frame = -1

Query: 396 CPSYLFSKVQHHCHQCLQKALAYCHQELKHRIHHRLLIDLSSLFYLSSWLQQLGHCHRTS 217
CP + S + H CL K L C + ++ +I I L + ++++ R
Sbjct: 783 CPVVISSSLTSHQENCLMKVLKRCKKAIRWKISDLKGISLLVCTH-HIYMEEEAKPIRQL 841

Query: 216 QRALNPHHRGQVQR----------FYPCSSSFLVKPSSI 130
QR LNPH + V+ YP S S V P+ +
Sbjct: 842 QRRLNPHLQEVVRAEVLKLLQAGIIYPISDSPWVSPTQV 880