DK960811 |
Clone id |
TST39A01NGRL0008_G16 |
Library |
TST39 |
Length |
643 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_G16. 5' end sequence. |
Accession |
DK960811 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
ATTTTGTTCCTTCTCCCGGAGCTACATTGTTGCATTCATCAGCCTCTCTCCTCACATGAT CAAAGTTGGTGAAAGCTTATTTTGAACATGCATCAGCAATGTGCTCTTGAATATCCAAGG ACTCATGGATATGCTCCATTGATCAATAAATCCAAGCACTACGGAGATTTCAGGCTTCCA GCCTTGCAAGCAAGGAAAAGGCTGGACGGCCAGTATGCTGGATGTTCAAGTAAAGGCTTT GCAAGCTTTCCCACATGTCGAAAACAGCAGCAAGGCCTTTGCAGGCTCAATCCCTTGTCA AGCTCTCTTGAGATGATGGAAGATGGAGGACGAAATGGAACTGTTGGAAGTGATGAAGCT TGCAATTCCTTTAGTACAGATCAAGCAGATAGGGTGAACTCGGTGCCTTCACTGCCAGGT TTCATTTATCCTTCGACAAAAACGGTTGGAAAATCGACAAACATTGTATGGCAAGAATGC ATGGTAAAGAGGGAAGAGAGGCAGAAAATTCTTGGGCAAAAAGGTTGTGTAATCTGGATA ACTGGTCTTAGTGGTTCAGGTAAGAGTACTCTCGCTTGTACATTGGACCATCAGCTCTCC AAGAGAGGAAATTTGAGCTATGTGCTAGACGGAGACAACTTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49204 |
Definition |
sp|O49204|KAPS_CATRO Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus |
Align length |
94 |
Score (bit) |
105.0 |
E-value |
3.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960811|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_G16, 5' (643 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O49204|KAPS_CATRO Adenylyl-sulfate kinase, chloroplastic OS=C... 105 3e-22 sp|Q43295|KAP1_ARATH Adenylyl-sulfate kinase 1, chloroplastic OS... 101 4e-21 sp|O49196|KAP2_ARATH Adenylyl-sulfate kinase 2, chloroplastic OS... 90 1e-17 sp|Q97MT8|CYSC_CLOAB Adenylyl-sulfate kinase OS=Clostridium acet... 89 2e-17 sp|Q9KCT0|CYSC1_BACHD Probable adenylyl-sulfate kinase OS=Bacill... 78 4e-14 sp|O06735|CYSC2_BACSU Probable adenylyl-sulfate kinase OS=Bacill... 75 2e-13 sp|Q7VE24|CYSC_PROMA Adenylyl-sulfate kinase OS=Prochlorococcus ... 72 2e-12 sp|Q8EQN3|CYSC_OCEIH Adenylyl-sulfate kinase OS=Oceanobacillus i... 72 2e-12 sp|A8ANW4|CYSC_CITK8 Adenylyl-sulfate kinase OS=Citrobacter kose... 70 7e-12 sp|Q7UQW3|CYSC_RHOBA Adenylyl-sulfate kinase OS=Rhodopirellula b... 70 9e-12 sp|Q9P7G9|KAPS_SCHPO Adenylyl-sulfate kinase OS=Schizosaccharomy... 69 2e-11 sp|A1U3X8|CYSC_MARAV Adenylyl-sulfate kinase OS=Marinobacter aqu... 69 2e-11 sp|Q8ZBP3|CYSC_YERPE Adenylyl-sulfate kinase OS=Yersinia pestis ... 69 2e-11 sp|A6TD42|CYSC_KLEP7 Adenylyl-sulfate kinase OS=Klebsiella pneum... 67 8e-11 sp|P57497|CYSC_BUCAI Adenylyl-sulfate kinase OS=Buchnera aphidic... 67 8e-11 sp|Q87SX6|CYSC_VIBPA Adenylyl-sulfate kinase OS=Vibrio parahaemo... 66 1e-10 sp|A1S9N4|CYSC_SHEAM Adenylyl-sulfate kinase OS=Shewanella amazo... 66 1e-10 sp|Q7MPF0|CYSC_VIBVY Adenylyl-sulfate kinase OS=Vibrio vulnificu... 66 2e-10 sp|Q8DE75|CYSC_VIBVU Adenylyl-sulfate kinase OS=Vibrio vulnificu... 66 2e-10 sp|Q8CR04|CYSC_STAES Adenylyl-sulfate kinase OS=Staphylococcus e... 66 2e-10 sp|Q5HL02|CYSC_STAEQ Adenylyl-sulfate kinase OS=Staphylococcus e... 66 2e-10 sp|O07309|NODQ_RHISB Bifunctional enzyme nodQ OS=Rhizobium sp. (... 65 2e-10 sp|P63889|CYSC_SALTY Adenylyl-sulfate kinase OS=Salmonella typhi... 65 2e-10 sp|P63890|CYSC_SALTI Adenylyl-sulfate kinase OS=Salmonella typhi... 65 2e-10 sp|A9N2D7|CYSC_SALPB Adenylyl-sulfate kinase OS=Salmonella parat... 65 2e-10 sp|Q88X60|CYSC_LACPL Adenylyl-sulfate kinase OS=Lactobacillus pl... 65 2e-10 sp|P72339|NODQ_RHIS3 Bifunctional enzyme nodQ OS=Rhizobium sp. (... 65 3e-10 sp|Q92203|KAPS_EMENI Adenylyl-sulfate kinase OS=Emericella nidul... 65 3e-10 sp|Q8DJ87|CYSC_THEEB Adenylyl-sulfate kinase OS=Thermosynechococ... 65 3e-10 sp|Q1R7U1|CYSC_ECOUT Adenylyl-sulfate kinase OS=Escherichia coli... 65 3e-10
>sp|O49204|KAPS_CATRO Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus GN=AKN PE=2 SV=1 Length = 312
Score = 105 bits (261), Expect = 3e-22 Identities = 52/94 (55%), Positives = 63/94 (67%) Frame = +1
Query: 361 CNSFSTDQADRVNSVPSLPGFIYPSTKTVGKSTNIVWQECMVKREERQKILGQKGCVIWI 540 CNS S + N PG T TVG STNI+W +C V++ ERQ+ L Q+GCVIWI Sbjct: 84 CNSNSDSSLNNCNG---FPGKKILQTTTVGNSTNILWHKCAVEKSERQEPLQQRGCVIWI 140
Query: 541 TGLSGSGKSTLACTLDHQLSKRGNLSYVLDGDNL 642 TGLSGSGKSTLAC L L +G L+Y+LDGDN+ Sbjct: 141 TGLSGSGKSTLACALSRGLHAKGKLTYILDGDNV 174
>sp|Q43295|KAP1_ARATH Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=AKN1 PE=2 SV=1 Length = 276
Score = 101 bits (251), Expect = 4e-21 Identities = 44/67 (65%), Positives = 55/67 (82%) Frame = +1
Query: 442 TVGKSTNIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSY 621 TVG STNI W EC V++ +RQ++L QKGCVIW+TGLSGSGKSTLAC L+ L ++G L Y Sbjct: 74 TVGNSTNIKWHECSVEKVDRQRLLDQKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCY 133
Query: 622 VLDGDNL 642 +LDGDN+ Sbjct: 134 ILDGDNV 140
>sp|O49196|KAP2_ARATH Adenylyl-sulfate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=AKN2 PE=2 SV=1 Length = 293
Score = 89.7 bits (221), Expect = 1e-17 Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 2/89 (2%) Frame = +1
Query: 382 QADRVNSVPSLPGFIYPSTKTVGK--STNIVWQECMVKREERQKILGQKGCVIWITGLSG 555 QA P+L I + GK + NIVW E + R +RQ++L QKGCV+WITGLSG Sbjct: 66 QASLTADFPALSETILKEGRNNGKEKAENIVWHESSICRCDRQQLLQQKGCVVWITGLSG 125
Query: 556 SGKSTLACTLDHQLSKRGNLSYVLDGDNL 642 SGKST+AC L L +RG L+Y LDGDN+ Sbjct: 126 SGKSTVACALSKALFERGKLTYTLDGDNV 154
>sp|Q97MT8|CYSC_CLOAB Adenylyl-sulfate kinase OS=Clostridium acetobutylicum GN=cysC PE=3 SV=1 Length = 200
Score = 89.0 bits (219), Expect = 2e-17 Identities = 40/64 (62%), Positives = 52/64 (81%) Frame = +1
Query: 451 KSTNIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSYVLD 630 KSTN+VWQE +KR+ R+K+L QKG V+W TGLSGSGKST+A L+ +L + G L+Y+LD Sbjct: 5 KSTNVVWQETKIKRQNREKMLKQKGAVLWFTGLSGSGKSTVASALEKKLYEMGYLTYLLD 64
Query: 631 GDNL 642 GDNL Sbjct: 65 GDNL 68
>sp|Q9KCT0|CYSC1_BACHD Probable adenylyl-sulfate kinase OS=Bacillus halodurans GN=BH1489 PE=3 SV=1 Length = 202
Score = 77.8 bits (190), Expect = 4e-14 Identities = 38/61 (62%), Positives = 44/61 (72%) Frame = +1
Query: 460 NIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSYVLDGDN 639 +IVW E V +EERQK K CV+W TGLSGSGKSTLA LD +L + G SYVLDGDN Sbjct: 8 HIVWHEASVSKEERQKRNRLKSCVVWFTGLSGSGKSTLANALDRKLFEEGIHSYVLDGDN 67
Query: 640 L 642 + Sbjct: 68 I 68
>sp|O06735|CYSC2_BACSU Probable adenylyl-sulfate kinase OS=Bacillus subtilis GN=yisZ PE=3 SV=2 Length = 199
Score = 75.5 bits (184), Expect = 2e-13 Identities = 32/61 (52%), Positives = 43/61 (70%) Frame = +1
Query: 460 NIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSYVLDGDN 639 NI+W + + +RQ + G K CV+W TGLSGSGKS LA +D +L ++G SYVLDGDN Sbjct: 6 NIIWHPAAISKSDRQSLNGHKSCVLWFTGLSGSGKSVLANAVDEKLYRKGIQSYVLDGDN 65
Query: 640 L 642 + Sbjct: 66 I 66
>sp|Q7VE24|CYSC_PROMA Adenylyl-sulfate kinase OS=Prochlorococcus marinus GN=cysC PE=3 SV=1 Length = 201
Score = 72.4 bits (176), Expect = 2e-12 Identities = 35/64 (54%), Positives = 45/64 (70%) Frame = +1
Query: 451 KSTNIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSYVLD 630 +++NIVW + V RE +K G K +IW TGLSGSGKSTLA L+ L K+G +YVLD Sbjct: 4 QASNIVWHKASVDRESIEKERGHKSVIIWFTGLSGSGKSTLANALNVALFKKGLATYVLD 63
Query: 631 GDNL 642 GDN+ Sbjct: 64 GDNI 67
>sp|Q8EQN3|CYSC_OCEIH Adenylyl-sulfate kinase OS=Oceanobacillus iheyensis GN=cysC PE=3 SV=1 Length = 199
Score = 72.0 bits (175), Expect = 2e-12 Identities = 34/66 (51%), Positives = 45/66 (68%) Frame = +1
Query: 445 VGKSTNIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSYV 624 + KSTNIVWQ+ VK+ +RQ + K V+W TGLSGSGKSTL+ L+ +L +Y Sbjct: 1 MNKSTNIVWQKTSVKKADRQHLNNHKSAVLWFTGLSGSGKSTLSSALEKELFSLETHTYH 60
Query: 625 LDGDNL 642 LDGDN+ Sbjct: 61 LDGDNV 66
>sp|A8ANW4|CYSC_CITK8 Adenylyl-sulfate kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysC PE=3 SV=1 Length = 201
Score = 70.5 bits (171), Expect = 7e-12 Identities = 32/61 (52%), Positives = 43/61 (70%) Frame = +1
Query: 460 NIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSYVLDGDN 639 N+VW V RE+R+ + G KG V+W TGLSGSGKST+A L+ L K G +++LDGDN Sbjct: 7 NVVWHAHAVTREDREALHGHKGAVVWFTGLSGSGKSTIAGALEEALHKLGISTWLLDGDN 66
Query: 640 L 642 + Sbjct: 67 V 67
>sp|Q7UQW3|CYSC_RHOBA Adenylyl-sulfate kinase OS=Rhodopirellula baltica GN=cysC PE=3 SV=2 Length = 247
Score = 70.1 bits (170), Expect = 9e-12 Identities = 34/61 (55%), Positives = 41/61 (67%) Frame = +1
Query: 460 NIVWQECMVKREERQKILGQKGCVIWITGLSGSGKSTLACTLDHQLSKRGNLSYVLDGDN 639 NIVW V RE+R+ LGQ+G V+W TGLSG GKST+A LD L RG +LDGDN Sbjct: 27 NIVWHAHTVSREDRESKLGQRGVVVWFTGLSGCGKSTIANELDRLLIDRGATCTLLDGDN 86
Query: 640 L 642 + Sbjct: 87 V 87
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S544 |
Definition |
tr|A9S544|A9S544_PHYPA Adenylyl-sulfate kinase OS=Physcomitrella patens subsp. patens |
Align length |
67 |
Score (bit) |
121.0 |
E-value |
4.0e-26 |
Report |
|