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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960813
Clone id TST39A01NGRL0008_G18
Library
Length 680
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_G18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGTTAATATCCGGGTGTGACGTTACCTTGCTTGAGGCGCCTTGCTCTCTCTTCATTCTCT
CTCTTTCCACTCGCATTGAGCTCTGCGCAGACAAGGAGGAGAAAGGTTTGTTGGGTTTTG
CTGTGGGGGCACAGACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGCGCCTATGAGGACGCTCATAGAGCTATGTAGACAACCCAAAATCTGGCCATGCT
TTGTGCTGCTCTTCTTCTTCCTGGCGGTGAATTGCAGCCCGCGCTCGGTGCATGCCGGCT
GCCTTGCCGGAAATGCAGGATTGGATTGGGCAGCTGTGAGGCCGGGTGGGCGCACTTTAC
TGCAGACCAATGTCTCTACCAATTACTTGGTGCTGGCCCAGGATCGCACGGAACGCAGAG
ACCCTCTCAATAACTTTGAAATTTATCGTGATGGTTGGGACGTCAAAAACAAGCACTATT
GGGGCTCGGCTGGTTTTACTGGTGCTGTCGGTTTTGTGCTGGCGGCAGCATGGCTGGCTT
TTGGATTGGTGCTTCTACTGCTCCTCTGCTGCTGCTGTTGCTGTTGCCATGGCTGGTTAA
AAGGTTCTCATAAAGGCGGCAACCTGTTTCCGTTCCTCTTCTTGCTTCTCTTCACGGGCG
CTGCTGTGGCAGGATGTGTG
■■Homology search results ■■ -
sp_hit_id Q62036
Definition sp|Q62036|AZI1_MOUSE 5-azacytidine-induced protein 1 OS=Mus musculus
Align length 63
Score (bit) 33.5
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960813|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G18, 5'
         (680 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q62036|AZI1_MOUSE 5-azacytidine-induced protein 1 OS=Mus musc...    33   1.1  
sp|Q86I32|Y7617_DICDI Uncharacterized protein DDB_G0275275 OS=Di...    33   1.4  
sp|Q9D1H0|CL052_MOUSE Uncharacterized protein C12orf52 homolog O...    32   4.1  
sp|Q28658|SPRR3_RABIT Small proline-rich protein 3 OS=Oryctolagu...    31   5.3  
sp|O96433|CCNT_DROME Cyclin-T OS=Drosophila melanogaster GN=CycT...    31   5.3  
sp|Q5U651|RAIN_HUMAN Ras-interacting protein 1 OS=Homo sapiens G...    31   6.9  
sp|Q8BRB7|MYST4_MOUSE Histone acetyltransferase MYST4 OS=Mus mus...    30   9.1  

>sp|Q62036|AZI1_MOUSE 5-azacytidine-induced protein 1 OS=Mus
           musculus GN=Azi1 PE=1 SV=1
          Length = 1060

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = -2

Query: 670 ATAAPVKRSKKRNGNRLPPL*EPFNQPWXXXXXXXXXXXSTNPKASHAAASTKPTAPVKP 491
           A+ A  +R K R   R P    P  +P             T+PKA++A AS  PT P  P
Sbjct: 345 ASEAEHRRPKDRPETRAPEQPRPMQEP----------GCVTHPKANNAGASIYPTGPADP 394

Query: 490 AEP 482
             P
Sbjct: 395 CPP 397


>sp|Q86I32|Y7617_DICDI Uncharacterized protein DDB_G0275275
           OS=Dictyostelium discoideum GN=DDB_G0275275 PE=4 SV=1
          Length = 542

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
 Frame = -3

Query: 585 NSNSSSRGA------VEAPIQKPAMLPPAQNRQHQ*NQPSPNSACF*RPNHHDKFQSY 430
           NSNSSS G          PIQ P+  P  + R  +   PSP        NHH    +Y
Sbjct: 126 NSNSSSTGRDSTPTPTPTPIQTPSSTPSKKKRSWRIRTPSPKPKLESNNNHHHNHHNY 183


>sp|Q9D1H0|CL052_MOUSE Uncharacterized protein C12orf52 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 253

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 426 EGLCVPCDPGPAPSNW*RHWSAVKCAHPASQLP 328
           +GLCVPC  G   S+   H +     HPAS  P
Sbjct: 170 DGLCVPCSLGQRRSHSLTHLTVPSTGHPASSAP 202


>sp|Q28658|SPRR3_RABIT Small proline-rich protein 3 OS=Oryctolagus
           cuniculus GN=SPRR3 PE=2 SV=1
          Length = 231

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
 Frame = -3

Query: 543 QKPAMLPPAQNRQHQ*NQPSPNSACF*RPNHHDKFQSY*EGLCVPCDPGPAPSNW*RHWS 364
           QK    PP Q +QHQ  QP        +P   D F    +  C P  P P  +N      
Sbjct: 6   QKQPFTPPPQPQQHQVKQPC-------QPPPQDTFVPITKDPCHPNVPSPGNTNI-AEQG 57

Query: 363 AVKCAHPASQLPNPILHFRQ----GSRHAPSAGCNSPPG 259
            VK     S +  P   + +    G+   P +GC S PG
Sbjct: 58  YVKIPEQGS-IKVPDTGYTKIPDSGNTKVPESGCTSVPG 95


>sp|O96433|CCNT_DROME Cyclin-T OS=Drosophila melanogaster GN=CycT
           PE=1 SV=2
          Length = 1097

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 29/109 (26%), Positives = 46/109 (42%)
 Frame = -3

Query: 588 GNSNSSSRGAVEAPIQKPAMLPPAQNRQHQ*NQPSPNSACF*RPNHHDKFQSY*EGLCVP 409
           G+S+SSS  + + P   P  +PP  +  H+  QP  N+     P+ H +  S   GL   
Sbjct: 381 GSSSSSSSSSHKMP-NYPGGMPPDAHTDHKSKQPGYNNR---MPSSHQRSSS--SGL--- 431

Query: 408 CDPGPAPSNW*RHWSAVKCAHPASQLPNPILHFRQGSRHAPSAGCNSPP 262
              G + S   R  S+   +      P+  + + + SR  P  G   PP
Sbjct: 432 ---GSSGSGSQRSSSSSSSSSQQPGRPSMPVDYHKSSRGMPPVGVGMPP 477


>sp|Q5U651|RAIN_HUMAN Ras-interacting protein 1 OS=Homo sapiens
           GN=RASIP1 PE=1 SV=1
          Length = 963

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -3

Query: 369 WSAVKCAHPA---SQLPNPILHFRQGSRHAPSAGCNSPPGRRRAAQS 238
           WS+++  HP    +QL + + H++ G    P A  + PP  R A  +
Sbjct: 851 WSSLRTDHPTLTPAQLHHLLSHYQLGPGRGPPAAWDPPPAEREAVDT 897


>sp|Q8BRB7|MYST4_MOUSE Histone acetyltransferase MYST4 OS=Mus
           musculus GN=Myst4 PE=2 SV=2
          Length = 1872

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 666 QQRP*REARRGTETGCRLYENLLTSHGNSNSSSRGAVEAPIQKPAMLPPAQNRQHQ*NQP 487
           QQR    A+R    G  L E       + +S  +GA + P   P+ LPP     H+ +QP
Sbjct: 150 QQRLRLGAKRAVNNGRLLKEGPQYRVNSGSSDGKGAPQYPSAFPSSLPPVSLLPHEKDQP 209
tr_hit_id Q6H887
Definition tr|Q6H887|Q6H887_ORYSJ Os02g0183500 protein OS=Oryza sativa subsp. japonica
Align length 89
Score (bit) 61.2
E-value 6.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960813|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_G18, 5'
         (680 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6H887|Q6H887_ORYSJ Os02g0183500 protein OS=Oryza sativa subs...    61   6e-08
tr|B8AIX7|B8AIX7_ORYSI Putative uncharacterized protein OS=Oryza...    61   6e-08
tr|A3A3V0|A3A3V0_ORYSJ Putative uncharacterized protein OS=Oryza...    61   6e-08
tr|A5BVV4|A5BVV4_VITVI Putative uncharacterized protein OS=Vitis...    58   6e-07
tr|A9S9C1|A9S9C1_PHYPA Predicted protein OS=Physcomitrella paten...    57   1e-06
tr|A9NWY8|A9NWY8_PICSI Putative uncharacterized protein OS=Picea...    56   2e-06
tr|Q69QY7|Q69QY7_ORYSJ Os02g0799300 protein OS=Oryza sativa subs...    55   3e-06
tr|A3ACC3|A3ACC3_ORYSJ Putative uncharacterized protein OS=Oryza...    55   3e-06
tr|A2XAM7|A2XAM7_ORYSI Putative uncharacterized protein OS=Oryza...    55   3e-06
tr|A7P3I2|A7P3I2_VITVI Chromosome chr1 scaffold_5, whole genome ...    54   7e-06
tr|Q9C997|Q9C997_ARATH Putative uncharacterized protein F23N20.1...    54   9e-06
tr|Q8GWG3|Q8GWG3_ARATH Putative uncharacterized protein At2g2527...    54   9e-06
tr|Q0WWV6|Q0WWV6_ARATH Putative uncharacterized protein At1g7111...    54   9e-06
tr|A9RMS1|A9RMS1_PHYPA Predicted protein OS=Physcomitrella paten...    54   1e-05
tr|B8A2B2|B8A2B2_MAIZE Putative uncharacterized protein OS=Zea m...    53   2e-05
tr|B6UF00|B6UF00_MAIZE Putative uncharacterized protein OS=Zea m...    53   2e-05
tr|Q9SIR6|Q9SIR6_ARATH Putative uncharacterized protein At2g2527...    53   2e-05
tr|Q1PF01|Q1PF01_ARATH Putative uncharacterized protein OS=Arabi...    53   2e-05
tr|A9RV11|A9RV11_PHYPA Predicted protein (Fragment) OS=Physcomit...    53   2e-05
tr|A0MEQ0|A0MEQ0_ARATH Putative uncharacterized protein (Fragmen...    53   2e-05
tr|Q8H0U2|Q8H0U2_ARATH Putative uncharacterized protein At2g1240...    52   3e-05
tr|A7QS34|A7QS34_VITVI Chromosome undetermined scaffold_155, who...    51   6e-05
tr|A5CBE9|A5CBE9_VITVI Putative uncharacterized protein OS=Vitis...    51   6e-05
tr|Q5ZEM2|Q5ZEM2_ORYSJ Putative uncharacterized protein P0684C01...    51   8e-05
tr|B8ACZ7|B8ACZ7_ORYSI Putative uncharacterized protein OS=Oryza...    51   8e-05
tr|A7Q8Y8|A7Q8Y8_VITVI Chromosome chr9 scaffold_65, whole genome...    51   8e-05
tr|A2ZNP6|A2ZNP6_ORYSJ Putative uncharacterized protein OS=Oryza...    51   8e-05
tr|Q9M8M2|Q9M8M2_ARATH Putative uncharacterized protein T21F11.1...    50   1e-04
tr|Q7XTN2|Q7XTN2_ORYSJ Os04g0644000 protein OS=Oryza sativa subs...    50   2e-04
tr|Q25A63|Q25A63_ORYSA H0306F03.12 protein OS=Oryza sativa GN=H0...    50   2e-04

>tr|Q6H887|Q6H887_ORYSJ Os02g0183500 protein OS=Oryza sativa subsp.
           japonica GN=OJ1572_F02.5 PE=4 SV=1
          Length = 565

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = +3

Query: 234 PCFVLLFFFLAVNCSPRSVHAGCLAGNAGLDWAAVRPGGRTLLQTNVSTNYLVLAQDRTE 413
           P  +LL   L++      V    L   A  D +AV  GGR+    + ST   VLA +RT 
Sbjct: 6   PPLLLLLIVLSL------VVLAALLAAAAADASAVAGGGRS----SPSTTTFVLAGERTR 55

Query: 414 RRDPLNNFEIYRDGWDVKNKHYWGSAGFT 500
           R+DPL+   +Y  GW++ ++HYW S GFT
Sbjct: 56  RKDPLDGLRLYSGGWNISDEHYWASVGFT 84


>tr|B8AIX7|B8AIX7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06121 PE=4 SV=1
          Length = 485

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = +3

Query: 234 PCFVLLFFFLAVNCSPRSVHAGCLAGNAGLDWAAVRPGGRTLLQTNVSTNYLVLAQDRTE 413
           P  +LL   L++      V    L   A  D +AV  GGR+    + ST   VLA +RT 
Sbjct: 6   PPLLLLLIVLSL------VVLAALLAAAAADASAVAGGGRS----SPSTTTFVLAGERTR 55

Query: 414 RRDPLNNFEIYRDGWDVKNKHYWGSAGFT 500
           R+DPL+   +Y  GW++ ++HYW S GFT
Sbjct: 56  RKDPLDGLRLYSGGWNISDEHYWASVGFT 84


>tr|A3A3V0|A3A3V0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005472 PE=4 SV=1
          Length = 447

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = +3

Query: 234 PCFVLLFFFLAVNCSPRSVHAGCLAGNAGLDWAAVRPGGRTLLQTNVSTNYLVLAQDRTE 413
           P  +LL   L++      V    L   A  D +AV  GGR+    + ST   VLA +RT 
Sbjct: 6   PPLLLLLIVLSL------VVLAALLAAAAADASAVAGGGRS----SPSTTTFVLAGERTR 55

Query: 414 RRDPLNNFEIYRDGWDVKNKHYWGSAGFT 500
           R+DPL+   +Y  GW++ ++HYW S GFT
Sbjct: 56  RKDPLDGLRLYSGGWNISDEHYWASVGFT 84


>tr|A5BVV4|A5BVV4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_030562 PE=4 SV=1
          Length = 473

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = +3

Query: 387 LVLAQDRTERRDPLNNFEIYRDGWDVKNKHYWGSAGFT 500
           LVL  +RT+R+DPL++F+ Y  GW++ NKHYW S GFT
Sbjct: 34  LVLVAERTKRKDPLSHFKQYTGGWNISNKHYWASVGFT 71


>tr|A9S9C1|A9S9C1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163589 PE=4 SV=1
          Length = 673

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +3

Query: 306 AGNAGLDWAAVRPGGRTLLQTNVSTNYLVLAQDRTERRDPLNNFEIYRDGWDVKNKHYWG 485
           +G++G +W  VR  GR+LL TN ST        R +R +P ++F  YR G+D+K+K+YWG
Sbjct: 206 SGDSGSEWKFVR--GRSLLATNTSTEKFRPLAPRDDRLNPFDSFNHYRAGYDIKSKNYWG 263

Query: 486 S 488
           S
Sbjct: 264 S 264


>tr|A9NWY8|A9NWY8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 539

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
 Frame = +3

Query: 237 CFVLLFFFLAVNCSPRSVHAGCLAGNAGLDWAAVRPGGRTLLQTN-----VSTNYLVLAQ 401
           C    F    + CS         A  A L      PGG   L+ +        + LVLA 
Sbjct: 10  CIASAFLLSLLLCSMHPT-----AALAALSSEEAVPGGIVHLEASPPAPLAENSSLVLAA 64

Query: 402 DRTERRDPLNNFEIYRDGWDVKNKHYWGSAGFT 500
            RT R DPL+NF+ Y  GW++ N+HYW S G T
Sbjct: 65  RRTHRHDPLDNFKRYGGGWNISNEHYWASVGLT 97


>tr|Q69QY7|Q69QY7_ORYSJ Os02g0799300 protein OS=Oryza sativa subsp.
           japonica GN=OJ1695_D07.22 PE=2 SV=1
          Length = 546

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +3

Query: 276 SPRSVHAGCLAGNAGLDWAAVRPGGRTLLQTNVSTNY-LVLAQDRTERRDPLNNFEIYRD 452
           +PR  H   +    G  + A R      +  NV+TN   VLAQ+RT R+DPLN F  Y  
Sbjct: 31  APREFHKALVPDRYG--FVARRSIAEAPVDVNVTTNSSFVLAQERTYRKDPLNGFRKYTG 88

Query: 453 GWDVKNKHYWGSAGFT 500
           GW++   HY  S G+T
Sbjct: 89  GWNISEVHYMASVGYT 104


>tr|A3ACC3|A3ACC3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008445 PE=4 SV=1
          Length = 546

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +3

Query: 276 SPRSVHAGCLAGNAGLDWAAVRPGGRTLLQTNVSTNY-LVLAQDRTERRDPLNNFEIYRD 452
           +PR  H   +    G  + A R      +  NV+TN   VLAQ+RT R+DPLN F  Y  
Sbjct: 31  APREFHKALVPDRYG--FVARRSIAEAPVDVNVTTNSSFVLAQERTYRKDPLNGFRKYTG 88

Query: 453 GWDVKNKHYWGSAGFT 500
           GW++   HY  S G+T
Sbjct: 89  GWNISEVHYMASVGYT 104


>tr|A2XAM7|A2XAM7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09307 PE=4 SV=1
          Length = 546

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +3

Query: 276 SPRSVHAGCLAGNAGLDWAAVRPGGRTLLQTNVSTNY-LVLAQDRTERRDPLNNFEIYRD 452
           +PR  H   +    G  + A R      +  NV+TN   VLAQ+RT R+DPLN F  Y  
Sbjct: 31  APREFHKALVPDRYG--FVARRSIAEAPVDVNVTTNSSFVLAQERTYRKDPLNGFRKYTG 88

Query: 453 GWDVKNKHYWGSAGFT 500
           GW++   HY  S G+T
Sbjct: 89  GWNISEVHYMASVGYT 104


>tr|A7P3I2|A7P3I2_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030452001
           PE=4 SV=1
          Length = 658

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 23/38 (60%), Positives = 26/38 (68%)
 Frame = +3

Query: 387 LVLAQDRTERRDPLNNFEIYRDGWDVKNKHYWGSAGFT 500
           LVLA  RT R D L  F+ YR GWD+ N+HYW S GFT
Sbjct: 188 LVLAAKRTNRPDILRGFKRYRGGWDITNRHYWASVGFT 225