BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960823|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_H04, 5'
         (613 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6TFA8|NIKR_KLEP7 Nickel-responsive regulator OS=Klebsiella p...    30   7.5  
sp|Q5UY89|UVRC_HALMA UvrABC system protein C OS=Haloarcula maris...    30   9.7  

>sp|A6TFA8|NIKR_KLEP7 Nickel-responsive regulator OS=Klebsiella
           pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
           78578) GN=nikR PE=3 SV=1
          Length = 132

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 19/71 (26%), Positives = 30/71 (42%)
 Frame = -3

Query: 608 NLSHLIAQVLMST*LKTDLQMPSLHRGQHVYDRLITTYPK*YLGNYLMCDQHGHYMFQLD 429
           N S  +  +L    L  D   P   RG  V    +  + K  L + L+  QH H+   + 
Sbjct: 27  NRSEAVRDILRDA-LNQDPPSPESRRGYAVLS-YVYEHEKRELASRLVATQHHHHDLSVA 84

Query: 428 TIHKELQHGEC 396
           T+H  + H +C
Sbjct: 85  TLHVHISHDDC 95


>sp|Q5UY89|UVRC_HALMA UvrABC system protein C OS=Haloarcula
           marismortui GN=uvrC PE=3 SV=1
          Length = 581

 Score = 30.0 bits (66), Expect = 9.7
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = -3

Query: 296 VPFRNQMSSKFSSTCKEILIKN*RFTSSTETLGWLVLVMVQGPVKRIQPDIKHVDGGSG 120
           V F ++   K     K++  +N  + +  E L W     V+G   R  PD+  +DGG G
Sbjct: 399 VTFVDETPEKSDYRRKKLTEQNDDYANMRELLRWRATRAVEGRDDRPDPDLLLIDGGDG 457

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960823|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_H04, 5'
         (613 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******