DK960825 |
Clone id |
TST39A01NGRL0008_H06 |
Library |
TST39 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_H06. 5' end sequence. |
Accession |
DK960825 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL21Contig1 |
Sequence |
TTACCCCAGCGGATGATGTGAACCACATCAACAAGCACAACTTTCGTATTCCTTTTGTTT GTGGCTGCCGCAACCTAGGTGAAGCTTTAAGAAGGATTGCAGAGGGGGCTGCAATGATCA GGACCAAGGGAGAAGCAGGGACTGGCAATGTGGTTGAAGCTGTGAGGCACGTGCGCTCTG TACTTGGTGAAATCAGGAGGCTTCAAAGCCTTGATGATGATGAAGTTTTTACGTTTGCAA AGGAAATTGCCGCCCCTTATGAGCTTGTGAGGCAAACTAAGCAACTTGGGCGCCTTCCAG TGGTAAATTTTGCAGCCGGTGGTGTTGCAACTCCTGCTGACGCAGCTATGATGATGCAGC TTGGGTGTGACGGTGTGTTTGTTGGGTCTGGTATCTTCAAAAGTGGCAACCCCTCTCAGC GTGCTCGAGCCATAGTTTCTGCTGTGACTCACTTCAATGACCCTAGCATTATAGCAGATG TCAGCTGCGGTTTGGGTGAAGCTATGGTGGGTATCAATCTTAATGACAAGAAAGTTGAGC GCTTTGCTGCAAGGTCTGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
186 |
Score (bit) |
309.0 |
E-value |
5.0e-84 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIQ8 |
Definition |
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
186 |
Score (bit) |
310.0 |
E-value |
4.0e-83 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960825|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_H06, 5' (560 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 310 4e-83 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 309 6e-83 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 307 2e-82 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 307 3e-82 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 296 7e-79 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 296 7e-79 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 293 3e-78 tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea ... 293 4e-78 tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome ... 293 4e-78 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 292 7e-78 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 291 2e-77 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 289 6e-77 tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza... 289 6e-77 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 288 1e-76 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 285 9e-76 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 283 4e-75 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 282 8e-75 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 266 4e-70 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 262 1e-68 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 261 1e-68 tr|Q01DD0|Q01DD0_OSTTA Sor-like protein (ISS) OS=Ostreococcus ta... 259 5e-68 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 258 2e-67 tr|A9B891|A9B891_HERA2 Pyridoxine biosynthesis protein OS=Herpet... 244 2e-63 tr|Q2RMJ0|Q2RMJ0_MOOTA Vitamin B6 biosynthesis protein OS=Moorel... 243 7e-63 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 242 1e-62 tr|Q4P7T9|Q4P7T9_USTMA Putative uncharacterized protein OS=Ustil... 241 3e-62 tr|A8NFX3|A8NFX3_COPC7 Putative uncharacterized protein OS=Copri... 241 3e-62 tr|A8Q0B9|A8Q0B9_MALGO Putative uncharacterized protein OS=Malas... 240 4e-62 tr|B1I157|B1I157_DESAP Pyridoxine biosynthesis protein OS=Desulf... 239 7e-62 tr|B6JV77|B6JV77_SCHJP Pyridoxal biosynthesis lyase pdxS OS=Schi... 238 2e-61
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 310 bits (793), Expect = 4e-83 Identities = 155/186 (83%), Positives = 168/186 (90%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 TPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRH RSV Sbjct: 130 TPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHTRSV 189
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 LGEIRRLQSLDDDEVF+FAKEIAAPYELVRQTKQLGRLPVVNF +MMQL Sbjct: 190 LGEIRRLQSLDDDEVFSFAKEIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQL 249
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSGIFKSG+P++RARAIV AVTH+ND ++A+VS LGEAMVGINL++KKVER Sbjct: 250 GCDGVFVGSGIFKSGDPAKRARAIVEAVTHYNDAHVLAEVSENLGEAMVGINLSNKKVER 309
Query: 543 FAARSD 560 FAARS+ Sbjct: 310 FAARSE 315
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 309 bits (792), Expect = 6e-83 Identities = 155/186 (83%), Positives = 166/186 (89%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 TPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRH RSV Sbjct: 129 TPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHTRSV 188
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 LG+IRRLQSLDDDEVFTFAKEI APYELVRQTKQLGRLPVVNF +MMQL Sbjct: 189 LGDIRRLQSLDDDEVFTFAKEIQAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQL 248
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSGIFKSG+P++RARAIV AVTH+ D ++ADVS LGEAMVGINL+DKKVER Sbjct: 249 GCDGVFVGSGIFKSGDPAKRARAIVEAVTHYRDAHVLADVSENLGEAMVGINLSDKKVER 308
Query: 543 FAARSD 560 FAARS+ Sbjct: 309 FAARSE 314
>tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226199 PE=4 SV=1 Length = 315
Score = 307 bits (787), Expect = 2e-82 Identities = 154/186 (82%), Positives = 166/186 (89%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 TPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRH RSV Sbjct: 130 TPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHTRSV 189
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 LGEIRRLQSLDDDEVFTFAK+IAAPYELVRQTKQLGRLPVVNF +MMQL Sbjct: 190 LGEIRRLQSLDDDEVFTFAKQIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQL 249
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSGIFKSG+P +R RAIV AVTH+ND ++A++S LGEAMVGINL+DKKVER Sbjct: 250 GCDGVFVGSGIFKSGDPVKRGRAIVEAVTHYNDAHMLAEMSENLGEAMVGINLSDKKVER 309
Query: 543 FAARSD 560 FAARS+ Sbjct: 310 FAARSE 315
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 307 bits (786), Expect = 3e-82 Identities = 153/186 (82%), Positives = 167/186 (89%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 TPADDV+HINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRH RSV Sbjct: 128 TPADDVHHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHTRSV 187
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 LG+IRRLQSLDDDEVFT+AKEI APYELVRQTKQLGRLPVVNF +MMQL Sbjct: 188 LGDIRRLQSLDDDEVFTYAKEIQAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQL 247
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSGIFKSG+P++RARAIV AVTH+ND ++A+VS LGEAMVGINL+DKKVER Sbjct: 248 GCDGVFVGSGIFKSGDPAKRARAIVEAVTHYNDARVLAEVSENLGEAMVGINLSDKKVER 307
Query: 543 FAARSD 560 FAARS+ Sbjct: 308 FAARSE 313
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 296 bits (757), Expect = 7e-79 Identities = 143/186 (76%), Positives = 164/186 (88%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 TPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMIRTKGEAGTGNVVEAVRHVRSV Sbjct: 132 TPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKGEAGTGNVVEAVRHVRSV 191
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 +G++R L+S+DDDEVF +AK IAAPY+LV QTKQLGRLPVV F +MMQL Sbjct: 192 MGDVRALRSMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQL 251
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER Sbjct: 252 GCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVER 311
Query: 543 FAARSD 560 +AARS+ Sbjct: 312 YAARSE 317
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 296 bits (757), Expect = 7e-79 Identities = 143/186 (76%), Positives = 164/186 (88%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 TPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMIRTKGEAGTGNVVEAVRHVRSV Sbjct: 195 TPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKGEAGTGNVVEAVRHVRSV 254
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 +G++R L+S+DDDEVF +AK IAAPY+LV QTKQLGRLPVV F +MMQL Sbjct: 255 MGDVRALRSMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQL 314
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER Sbjct: 315 GCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVER 374
Query: 543 FAARSD 560 +AARS+ Sbjct: 375 YAARSE 380
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 293 bits (751), Expect = 3e-78 Identities = 143/186 (76%), Positives = 162/186 (87%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 T ADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTGN++EAVRHVRSV Sbjct: 126 TLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV 185
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 + +IR L+++DDDEVFTFAK IAAPY+LV QTKQLGRLPVV+F +MMQL Sbjct: 186 MSDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQL 245
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSG+FKSG+P++RARAIV AVTH++DP I+A+VSCGLGEAMVGINL D KVER Sbjct: 246 GCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLTDDKVER 305
Query: 543 FAARSD 560 FA RS+ Sbjct: 306 FANRSE 311
>tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea europaea PE=2 SV=1 Length = 196
Score = 293 bits (750), Expect = 4e-78 Identities = 140/180 (77%), Positives = 160/180 (88%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 TPADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTGN++EAVRHVRSV Sbjct: 17 TPADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV 76
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 +G+IR L+++DDDEVFTFAK+I APY+LV QTKQLGRLPVV+F +MMQL Sbjct: 77 MGDIRLLRNMDDDEVFTFAKKIQAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQL 136
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++ DVSCGLGEAMVGINLND+KVER Sbjct: 137 GCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPEVLVDVSCGLGEAMVGINLNDEKVER 196
>tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024095001 PE=4 SV=1 Length = 197
Score = 293 bits (750), Expect = 4e-78 Identities = 141/186 (75%), Positives = 165/186 (88%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 T AD+ NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTGN+VEAVRHVRSV Sbjct: 12 TVADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHVRSV 71
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 +GEIR L+++DDDEVFT+AK+++APY+LV QTKQLGRLPVV+F +MMQL Sbjct: 72 MGEIRVLRNMDDDEVFTYAKKLSAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQL 131
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++A+VSCGLGEAMVGINLND KVER Sbjct: 132 GCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDDKVER 191
Query: 543 FAARSD 560 +A RS+ Sbjct: 192 YANRSE 197
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 292 bits (748), Expect = 7e-78 Identities = 140/186 (75%), Positives = 164/186 (88%) Frame = +3
Query: 3 TPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHVRSV 182 T AD+ NHINKHNFRIPFVCGCRNLGEALRR+ EGAAMIRTKGEAGTGN+VEAVRHVRSV Sbjct: 125 TLADEDNHINKHNFRIPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIVEAVRHVRSV 184
Query: 183 LGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXXXXXXXMMMQL 362 +G+IR L+++DDDEVFTFAK+IAAPY+LV QTKQLGRLPVV+F +MMQL Sbjct: 185 MGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQL 244
Query: 363 GCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVER 542 GCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++A++SCGLGEAMVG+NLND VER Sbjct: 245 GCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNLNDSNVER 304
Query: 543 FAARSD 560 FA RS+ Sbjct: 305 FANRSE 310
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