DK960833
Clone id TST39A01NGRL0008_H14
Library
Length 632
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_H14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGCCGCACAACTTTGTACAAAAAGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAA
AGAGGAGACAAATTTACTTTCCACACAAATACATTTCAATATTAGTAATTGCATCAAGGT
GAGAGATGCAAAATGCTACCTATAGAATGTCTATACTTTACAAGCCCCACGGCATTCTGC
ACGACCGTGCATTGTTGGCTCAAACTTCCAACGTGACCAAAAGATATTGATGCAGGACGG
AATGTTTGGTTGGATAAGGAAGTCCCACTTACATCGAGGGCTGTACACAGTTCGGAAACA
CAAACCAGAAGAGGGAAGGAGTAATGATGATTTTTGGTATGCCAAGCCTCTCAAAATGTG
GGCCATGGCACGTAACTCTCCTTTAAAGAAACCAGATCACATAGACCTGCTTGAAAGCGT
CTGGAATGGAAAGATTGGCCAACTCGCAAACTTTGCTTGGAGTGTGGACGCCAATCGTAA
ATTGATTTGTGAGATGCCTCATTTGATCGATATCACAAAAATCACTGGAAAAAGGGTGTG
CCCAGCCTCAATGCCAAAGAGCATTTACTGACACTACATAATGTAATCACACTTCTTGCA
GAGCGATGCTTAAATCTTGAGCCGACTTCCCA
■■Homology search results ■■ -
sp_hit_id Q23MT7
Definition sp|Q23MT7|TTL6A_TETTH Probable beta-tubulin polyglutamylase OS=Tetrahymena thermophila
Align length 40
Score (bit) 30.8
E-value 5.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960833|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_H14, 5'
(577 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q23MT7|TTL6A_TETTH Probable beta-tubulin polyglutamylase OS=T... 31 5.1
sp|Q5KV31|SECA2_GEOKA Protein translocase subunit secA 2 OS=Geob... 31 5.1
sp|O32450|MALQ_PYRKO 4-alpha-glucanotransferase OS=Pyrococcus ko... 30 8.7
sp|Q6D734|FBPC1_ERWCT Fe(3+) ions import ATP-binding protein fbp... 30 8.7

>sp|Q23MT7|TTL6A_TETTH Probable beta-tubulin polyglutamylase
OS=Tetrahymena thermophila GN=Ttll6a PE=4 SV=1
Length = 1189

Score = 30.8 bits (68), Expect = 5.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1

Query: 163 QKILMQDGMFGWIRKSHLHRGLYTVRKHKPEEGRSNDDFW 282
QKI GMF RK+HL R L +RK P++ + W
Sbjct: 407 QKINHFPGMFSLARKNHLARNLMKMRKQFPDQYKFFPQTW 446


>sp|Q5KV31|SECA2_GEOKA Protein translocase subunit secA 2
OS=Geobacillus kaustophilus GN=secA2 PE=3 SV=1
Length = 797

Score = 30.8 bits (68), Expect = 5.1
Identities = 20/101 (19%), Positives = 47/101 (46%)
Frame = +1

Query: 265 SNDDFWYAKPLKMWAMARNSPLKKPDHIDLLESVWNGKIGQLANFAWSVDANRKLICEMP 444
S ++FW L++ + N P ++ D DL+ + K+ ++ + ++A + P
Sbjct: 377 SKEEFWQTYRLRVITIPTNQPSRRTDWDDLVYQTYEAKVRKIIDEVKKMNAIGR-----P 431

Query: 445 HLIDITKITGKRVCPASMPKSIY*HYIM*SHFLQSDA*ILS 567
LI T + A+ K+ H+++ + + +A I++
Sbjct: 432 VLIGTTSVAQSEQLSAAFSKAGIPHHLLNAKTEEEEARIIA 472


>sp|O32450|MALQ_PYRKO 4-alpha-glucanotransferase OS=Pyrococcus
kodakaraensis GN=TK1809 PE=3 SV=1
Length = 653

Score = 30.0 bits (66), Expect = 8.7
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +1

Query: 184 GMFGWIRKSHLHRGLYTVRKHKPEEGRSNDDFWYAKPLKMWAMARNSPLKKPDHIDLLES 363
G FGW+ +S R + E Y+ PL W KP+H+DLL S
Sbjct: 17 GNFGWVMESAYERSYRPFMETLEEYPNMKVAVHYSGPLLEWIRDN-----KPEHLDLLRS 71

Query: 364 VWNGKIGQL 390
+ K GQL
Sbjct: 72 L--VKRGQL 78


>sp|Q6D734|FBPC1_ERWCT Fe(3+) ions import ATP-binding protein fbpC 1
OS=Erwinia carotovora subsp. atroseptica GN=fbpC1 PE=3
SV=1
Length = 352

Score = 30.0 bits (66), Expect = 8.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1

Query: 214 SGTSLSNQTFRPASISFGHVGSLSQQCTVVQNA 116
+G S S RP +I+ H G SQ+CT+ Q A
Sbjct: 271 AGLSESTVGIRPEAITLSHQGEESQRCTITQVA 303


tr_hit_id Q3MCQ5
Definition tr|Q3MCQ5|Q3MCQ5_ANAVT Putative uncharacterized protein OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Align length 52
Score (bit) 36.6
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960833|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_H14, 5'
(577 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3MCQ5|Q3MCQ5_ANAVT Putative uncharacterized protein OS=Anaba... 37 1.0
tr|A6CH24|A6CH24_9PLAN Putative uncharacterized protein (Fragmen... 37 1.0
tr|A5PBY1|A5PBY1_9SPHN Putative uncharacterized protein OS=Eryth... 37 1.0
tr|Q8YR69|Q8YR69_ANASP All3581 protein OS=Anabaena sp. (strain P... 34 5.1
tr|A5FIH2|A5FIH2_FLAJ1 Osmosensitive K+ channel His kinase senso... 33 8.7
tr|B6KRV3|B6KRV3_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.7

>tr|Q3MCQ5|Q3MCQ5_ANAVT Putative uncharacterized protein OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_1608
PE=4 SV=1
Length = 391

Score = 36.6 bits (83), Expect = 1.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1

Query: 181 DGMFGWIRKSHLHRGLYTVRKHKPEEGRSNDDFWYAKPLKMWAMARNSPLKK 336
D GW +S L R + + KH P+E +++ FW K W + PL K
Sbjct: 20 DRFSGWATESRLRRSILSCLKHTPKE--TSESFWALYWYKFWQVPETQPLAK 69


>tr|A6CH24|A6CH24_9PLAN Putative uncharacterized protein (Fragment)
OS=Planctomyces maris DSM 8797 GN=PM8797T_18711 PE=4
SV=1
Length = 458

Score = 36.6 bits (83), Expect = 1.0
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +1

Query: 247 KPEEGRSNDDFWYAKPLKMWAMARNSPLKKPDHI-----DLLESVWNGKIGQLANFAWSV 411
KPE G N D KP K A P +PD I DL+E+ + G L NFAW V
Sbjct: 158 KPEGGEWNYDSENRKPPKDGLSAPERPKFEPDEITQEVIDLVENRFGDHFGSLENFAWPV 217


>tr|A5PBY1|A5PBY1_9SPHN Putative uncharacterized protein
OS=Erythrobacter sp. SD-21 GN=ED21_30139 PE=4 SV=1
Length = 526

Score = 36.6 bits (83), Expect = 1.0
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +1

Query: 247 KPEEGRSNDDFWYAKPLKMWAMARNSPLKKPDHI-----DLLESVWNGKIGQLANFAWSV 411
KPE G N D KP K A P +PD I DL+E+ + G L NFAW V
Sbjct: 180 KPEGGEWNYDSENRKPPKDGLSAPERPKFEPDEITQEVIDLVENRFGDHFGSLENFAWPV 239


>tr|Q8YR69|Q8YR69_ANASP All3581 protein OS=Anabaena sp. (strain PCC
7120) GN=all3581 PE=4 SV=1
Length = 409

Score = 34.3 bits (77), Expect = 5.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1

Query: 181 DGMFGWIRKSHLHRGLYTVRKHKPEEGRSNDDFWYAKPLKMWAMARNSPLKK 336
D GW +S L R + KH P+E +++ FW K W + PL K
Sbjct: 38 DRFSGWATESRLRRSILGCLKHTPKE--TSEYFWALYWYKFWQIPETQPLAK 87


>tr|A5FIH2|A5FIH2_FLAJ1 Osmosensitive K+ channel His kinase sensor
OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
2064 / UW101) GN=Fjoh_1971 PE=4 SV=1
Length = 374

Score = 33.5 bits (75), Expect = 8.7
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Frame = -2

Query: 474 SSDFCDIDQMRHLTNQFTIGVHTPSKVCELANLSIPDAF------KQVYVIWFL*RRVTC 313
SS+ +D+ RHL N F + V ++V +L N +I DA KQ+ + C
Sbjct: 287 SSNRIALDKQRHLINNFKLAVQLGAEVIKLENSNITDAILTTVEEKQITTV--------C 338

Query: 312 HG-PHFERLGIPKIIITPSLF 253
G PHF + K+I++ ++F
Sbjct: 339 IGKPHF---NLFKVILSTTIF 356


>tr|B6KRV3|B6KRV3_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_078730 PE=4 SV=1
Length = 705

Score = 33.5 bits (75), Expect = 8.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1

Query: 73 AKCYL*NVYTLQAPRHSARPCIVGSNFQRDQKILMQDGMFGWIR-KSHLHRGLYTVRKHK 249
++C+ + T + R ARPC GS+ IL++D GW + LHR T +
Sbjct: 194 SRCFDASPETTRTSRRRARPCEAGSSAPPSDTILLKDRQAGWCEGRRFLHRSSST---QQ 250

Query: 250 PEE 258
P+E
Sbjct: 251 PQE 253