DK960836 |
Clone id |
TST39A01NGRL0008_H18 |
Library |
TST39 |
Length |
685 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_H18. 5' end sequence. |
Accession |
DK960836 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1301Contig1 |
Sequence |
TGTTTCTCGCATGGCAACCCTTCGTACCTCCGCATTCAAGTCTTTAGAGAGCCTGCCGAA GGCGAGTGCGAACCCCCCATTTGAAACACCGAGAAAAGTAGCAAGCCTTTCTGCTTTCAG GAAACCTCGACATAGCTTCGCTCTAACATGGAGCGCAAGGCTGGCTTTTGCAGACGGTAA TGGCAGGGTTCAGCTTGCTGCTGCGGCTGCCACAAGCTCTGTTGAGGTTTCCCTTGAGTC CGATTTGGGCATTTCTTATGAAAAGCTTCAGAAGCTTCTTGCCAATTGTGAATGGGAGCT TGCCGACGAAGAGACTCGGCGACTCATCATACTGCTGGCAGGGGAAAGTGCAGTGAAGCG GAAATATGTATTCTTCTCTGAGGTGCAATTCATGCCGAAAGCAGACCTGCAGACCATTGA TCGGATATGGCGCACATACAGCCAAAACAAATTTGGGTATAGTGTACAGAGGAAGATCAT GAAGAGGGTGGATGGGGACTGCACTGCATTCTTTAAGAAAGTGAGCTGGATGAAGCCGTT GGGTTCGGATACTTTGCAGTACACATACCGCTCATTTCCTTCGGAATTTATGTGGGAGCT TGCCCCTAGTACACCTGAGGGCCACCTTCCCTTAACAAATGCGCTACGAGGTACACAACT CTGGAGGAGCCTACTTGATCATCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LX31 |
Definition |
sp|Q9LX31|GUN4C_ARATH Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana |
Align length |
143 |
Score (bit) |
168.0 |
E-value |
3.0e-41 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NXG2 |
Definition |
tr|A9NXG2|A9NXG2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
146 |
Score (bit) |
205.0 |
E-value |
3.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960836|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_H18, 5' (685 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NXG2|A9NXG2_PICSI Putative uncharacterized protein OS=Picea... 205 3e-51 tr|A7QM65|A7QM65_VITVI Chromosome chr5 scaffold_124, whole genom... 196 9e-49 tr|A5BEZ5|A5BEZ5_VITVI Putative uncharacterized protein OS=Vitis... 196 9e-49 tr|A9SSH7|A9SSH7_PHYPA Predicted protein OS=Physcomitrella paten... 174 6e-42 tr|A9TVY6|A9TVY6_PHYPA Predicted protein (Fragment) OS=Physcomit... 170 9e-41 tr|B4FT63|B4FT63_MAIZE Putative uncharacterized protein OS=Zea m... 167 6e-40 tr|Q7XJ48|Q7XJ48_ARATH GUN4 mutant OS=Arabidopsis thaliana GN=GU... 166 1e-39 tr|B6T5T7|B6T5T7_MAIZE Putative uncharacterized protein OS=Zea m... 166 1e-39 tr|Q53M04|Q53M04_ORYSJ GUN4-like family protein, expressed OS=Or... 157 5e-37 tr|A2ZD86|A2ZD86_ORYSI Putative uncharacterized protein OS=Oryza... 156 1e-36 tr|A4S8T2|A4S8T2_OSTLU Predicted protein (Fragment) OS=Ostreococ... 144 5e-33 tr|Q00TS4|Q00TS4_OSTTA Homology to unknown gene OS=Ostreococcus ... 142 2e-32 tr|A8I5N5|A8I5N5_CHLRE Tetrapyrrole-binding protein OS=Chlamydom... 137 5e-31 tr|B0JI65|B0JI65_MICAN Putative uncharacterized protein OS=Micro... 127 5e-28 tr|B4B4A6|B4B4A6_9CHRO GUN4 domain protein OS=Cyanothece sp. PCC... 127 7e-28 tr|A8YH20|A8YH20_MICAE Similar to tr|Q8YVZ0|Q8YVZ0 OS=Microcysti... 127 9e-28 tr|B4WJP2|B4WJP2_9SYNE GUN4-like family OS=Synechococcus sp. PCC... 126 1e-27 tr|A3IWC5|A3IWC5_9CHRO Putative uncharacterized protein OS=Cyano... 126 1e-27 tr|B1WNJ7|B1WNJ7_CYAA5 Putative uncharacterized protein OS=Cyano... 125 2e-27 tr|Q8DIJ1|Q8DIJ1_THEEB Ycf53 protein OS=Thermosynechococcus elon... 123 1e-26 tr|B7KFI8|B7KFI8_9CHRO GUN4 domain protein OS=Cyanothece sp. PCC... 123 1e-26 tr|Q4C3B5|Q4C3B5_CROWT GUN4-like OS=Crocosphaera watsonii GN=Cwa... 122 2e-26 tr|B7K4R0|B7K4R0_SYNP8 GUN4 domain protein OS=Synechococcus sp. ... 122 2e-26 tr|B4BYE4|B4BYE4_9CHRO GUN4 domain protein OS=Cyanothece sp. PCC... 122 2e-26 tr|A8G4Q0|A8G4Q0_PROM2 Putative uncharacterized protein OS=Proch... 119 1e-25 tr|B0CEB3|B0CEB3_ACAM1 GUN4-like family protein OS=Acaryochloris... 119 2e-25 tr|B8C9C4|B8C9C4_THAPS Putative uncharacterized protein (Fragmen... 119 2e-25 tr|B5W9J8|B5W9J8_SPIMA GUN4 domain protein OS=Arthrospira maxima... 119 2e-25 tr|A3YZV9|A3YZV9_9SYNE Putative uncharacterized protein OS=Synec... 119 2e-25 tr|A0ZDK2|A0ZDK2_NODSP GUN4-like protein OS=Nodularia spumigena ... 118 4e-25
>tr|A9NXG2|A9NXG2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 269
Score = 205 bits (521), Expect = 3e-51 Identities = 98/146 (67%), Positives = 120/146 (82%), Gaps = 1/146 (0%) Frame = +2
Query: 251 ISYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQTIDRIW 430 +SYE L++ LA+ +WE ADEETRRL+I+LAGESA+KR Y+FFSEVQF+P +DL+ ID +W Sbjct: 86 VSYELLRQKLASGQWESADEETRRLLIVLAGESAIKRNYIFFSEVQFIPASDLKAIDDLW 145
Query: 431 RTYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPL-GSDTLQYTYRSFPSEFMWELAP 607 R++S +FGYSVQR+I +V+ D T FFKKV+WMK L GS+ QYTYRSFP EFMWE Sbjct: 146 RSHSNGRFGYSVQRRIWNKVNRDFTEFFKKVAWMKLLQGSEIEQYTYRSFPREFMWEFGD 205
Query: 608 STPEGHLPLTNALRGTQLWRSLLDHP 685 STPEGHLPLTNALRGTQL S+L HP Sbjct: 206 STPEGHLPLTNALRGTQLLSSILQHP 231
>tr|A7QM65|A7QM65_VITVI Chromosome chr5 scaffold_124, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001938001 PE=4 SV=1 Length = 229
Score = 196 bits (499), Expect = 9e-49 Identities = 94/145 (64%), Positives = 116/145 (80%) Frame = +2
Query: 251 ISYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQTIDRIW 430 ISY+ LQ+ L++ + ADEETRRL+I+LAGE+AVKR YVFFSEVQF+P+ADL+ ID +W Sbjct: 41 ISYDVLQQHLSSKNYRQADEETRRLLIVLAGEAAVKRGYVFFSEVQFIPEADLKAIDELW 100
Query: 431 RTYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMWELAPS 610 R +S NKFGYSVQR+I ++V+ D + FF KV WMK L ++ QY YR+FP+EFMWEL Sbjct: 101 RQHSNNKFGYSVQRRIWEKVNKDFSRFFLKVGWMKKLDTEVEQYNYRAFPTEFMWELTDD 160
Query: 611 TPEGHLPLTNALRGTQLWRSLLDHP 685 TPEGHLPLTNALRGTQL LL HP Sbjct: 161 TPEGHLPLTNALRGTQLLNCLLGHP 185
>tr|A5BEZ5|A5BEZ5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030118 PE=4 SV=1 Length = 268
Score = 196 bits (499), Expect = 9e-49 Identities = 94/145 (64%), Positives = 116/145 (80%) Frame = +2
Query: 251 ISYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQTIDRIW 430 ISY+ LQ+ L++ + ADEETRRL+I+LAGE+AVKR YVFFSEVQF+P+ADL+ ID +W Sbjct: 80 ISYDVLQQHLSSKNYRQADEETRRLLIVLAGEAAVKRGYVFFSEVQFIPEADLKAIDELW 139
Query: 431 RTYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMWELAPS 610 R +S NKFGYSVQR+I ++V+ D + FF KV WMK L ++ QY YR+FP+EFMWEL Sbjct: 140 RQHSNNKFGYSVQRRIWEKVNKDFSRFFLKVGWMKKLDTEVEQYNYRAFPTEFMWELTDD 199
Query: 611 TPEGHLPLTNALRGTQLWRSLLDHP 685 TPEGHLPLTNALRGTQL LL HP Sbjct: 200 TPEGHLPLTNALRGTQLLNCLLGHP 224
>tr|A9SSH7|A9SSH7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134625 PE=4 SV=1 Length = 200
Score = 174 bits (440), Expect = 6e-42 Identities = 86/153 (56%), Positives = 107/153 (69%) Frame = +2
Query: 227 VSLESDLGISYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKAD 406 + L +D G S E L+ LA EWE AD ETRRL+ +LAGE AVKRK+V+FSEV+F+ +D Sbjct: 30 IDLVTDSGASLELLRDKLAAGEWEAADAETRRLLCVLAGEEAVKRKWVYFSEVKFISVSD 89
Query: 407 LQTIDRIWRTYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSE 586 L +D +W+ YS KFGYSVQ+KI AFF KV W +PL D Q TY+ FP E Sbjct: 90 LTKVDSLWKQYSNGKFGYSVQKKIWNNSGKTWNAFFNKVGWTRPL--DEYQDTYKKFPLE 147
Query: 587 FMWELAPSTPEGHLPLTNALRGTQLWRSLLDHP 685 FMW++A TPEGHLPLTNALRGT+L +L+HP Sbjct: 148 FMWDVADPTPEGHLPLTNALRGTRLLEEVLNHP 180
>tr|A9TVY6|A9TVY6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_151587 PE=4 SV=1 Length = 162
Score = 170 bits (430), Expect = 9e-41 Identities = 83/144 (57%), Positives = 103/144 (71%) Frame = +2
Query: 254 SYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQTIDRIWR 433 S E L++ LA EWE AD ETRRL+ +LAGE AVKRK+V+FSEV+F+ +DL +D +WR Sbjct: 1 SLETLREKLAAGEWEAADAETRRLLCVLAGEEAVKRKWVYFSEVKFISASDLTKVDSLWR 60
Query: 434 TYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMWELAPST 613 YS KFGYSVQ+KI FF+KV W +PL D Q TY+ FP EFMW++A T Sbjct: 61 QYSNGKFGYSVQKKIWNNSGKSWNTFFRKVGWTRPL--DDYQDTYKKFPLEFMWDVADPT 118
Query: 614 PEGHLPLTNALRGTQLWRSLLDHP 685 PEGHLPLTNALRGT+L ++L HP Sbjct: 119 PEGHLPLTNALRGTRLLEAVLHHP 142
>tr|B4FT63|B4FT63_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 271
Score = 167 bits (423), Expect = 6e-40 Identities = 82/150 (54%), Positives = 106/150 (70%) Frame = +2
Query: 236 ESDLGISYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQT 415 E + G S + L++ LA ++ ADE TR LII LAGE A +R YVFFSEVQF+P DL Sbjct: 80 EEEEGPSLDLLRRQLAAGDYRQADETTRALIIDLAGEPARRRGYVFFSEVQFIPAEDLAA 139
Query: 416 IDRIWRTYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMW 595 ID +W+ +S +FGYSVQR++ ++ D T FF +V WM+ L ++ QY YR+FP EF+W Sbjct: 140 IDGLWKEHSGGRFGYSVQRRLWEKSRRDFTRFFIRVGWMRKLDTEVEQYNYRAFPDEFLW 199
Query: 596 ELAPSTPEGHLPLTNALRGTQLWRSLLDHP 685 EL TPEGHLPLTNALRGTQL ++L HP Sbjct: 200 ELTDDTPEGHLPLTNALRGTQLLANILTHP 229
>tr|Q7XJ48|Q7XJ48_ARATH GUN4 mutant OS=Arabidopsis thaliana GN=GUN4 PE=4 SV=1 Length = 265
Score = 166 bits (421), Expect = 1e-39 Identities = 81/143 (56%), Positives = 101/143 (70%) Frame = +2
Query: 257 YEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQTIDRIWRT 436 ++ L+ N + ADEETRRL+I ++GE+AVKR YVFFSEV+ + DLQ ID +W Sbjct: 81 FDVLENHFVNQNFRQADEETRRLLIQISGEAAVKRGYVFFSEVKTISPEDLQAIDNLWIK 140
Query: 437 YSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMWELAPSTP 616 +S +FGYSVQRKI +V D T FF KV WMK L ++ +QY YR+FP EF WEL TP Sbjct: 141 HSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEVVQYNYRAFPDEFKWELNDETP 200
Query: 617 EGHLPLTNALRGTQLWRSLLDHP 685 GHLPLTNALRGTQL + +L HP Sbjct: 201 LGHLPLTNALRGTQLLKCVLSHP 223
>tr|B6T5T7|B6T5T7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 271
Score = 166 bits (421), Expect = 1e-39 Identities = 82/150 (54%), Positives = 105/150 (70%) Frame = +2
Query: 236 ESDLGISYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQT 415 E + G S + L++ LA ++ ADE TR LII LAGE A +R YVFFSEVQF+P DL Sbjct: 80 EEEEGPSLDLLRRQLAAGDYRQADETTRALIIDLAGEPARRRGYVFFSEVQFIPAEDLAA 139
Query: 416 IDRIWRTYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMW 595 ID +W+ +S +FGYSVQR++ ++ D T FF +V WM+ L ++ QY YR+FP EFMW Sbjct: 140 IDGLWKEHSGGRFGYSVQRRLWEKSRRDFTRFFIRVGWMRKLDTEVEQYNYRAFPDEFMW 199
Query: 596 ELAPSTPEGHLPLTNALRGTQLWRSLLDHP 685 EL TPEGHLP TNALRGTQL ++L HP Sbjct: 200 ELTDDTPEGHLPXTNALRGTQLLANILTHP 229
>tr|Q53M04|Q53M04_ORYSJ GUN4-like family protein, expressed OS=Oryza sativa subsp. japonica GN=Os11g0267000 PE=2 SV=1 Length = 273
Score = 157 bits (398), Expect = 5e-37 Identities = 78/144 (54%), Positives = 100/144 (69%) Frame = +2
Query: 254 SYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQTIDRIWR 433 S E L LA ++ ADE TR L+I LAGE A +R YVFFSEVQF+ DL+ ID +W+ Sbjct: 83 SLELLGAQLAERDYRQADETTRALLIELAGEPARRRGYVFFSEVQFISADDLRAIDALWQ 142
Query: 434 TYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMWELAPST 613 +S +FGYSVQR++ ++ D T FF +V WMK L ++ Q+ YR+FP EF+WEL T Sbjct: 143 EHSGGRFGYSVQRRLWEKSRRDFTRFFIRVGWMKKLDTEVEQFNYRAFPDEFIWELNDDT 202
Query: 614 PEGHLPLTNALRGTQLWRSLLDHP 685 PEGHLPLTNALRGTQL ++ HP Sbjct: 203 PEGHLPLTNALRGTQLLGNIFTHP 226
>tr|A2ZD86|A2ZD86_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35751 PE=4 SV=1 Length = 273
Score = 156 bits (394), Expect = 1e-36 Identities = 77/144 (53%), Positives = 99/144 (68%) Frame = +2
Query: 254 SYEKLQKLLANCEWELADEETRRLIILLAGESAVKRKYVFFSEVQFMPKADLQTIDRIWR 433 S E L LA ++ ADE TR L+I LAGE A +R YVFFSEVQF+ D + ID +W+ Sbjct: 83 SLELLGAQLAERDYRQADETTRALLIELAGEPARRRGYVFFSEVQFISADDFRAIDALWQ 142
Query: 434 TYSQNKFGYSVQRKIMKRVDGDCTAFFKKVSWMKPLGSDTLQYTYRSFPSEFMWELAPST 613 +S +FGYSVQR++ ++ D T FF +V WMK L ++ Q+ YR+FP EF+WEL T Sbjct: 143 EHSGGRFGYSVQRRLWEKSRRDFTRFFIRVGWMKKLDTEVEQFNYRAFPDEFIWELNDDT 202
Query: 614 PEGHLPLTNALRGTQLWRSLLDHP 685 PEGHLPLTNALRGTQL ++ HP Sbjct: 203 PEGHLPLTNALRGTQLLGNIFTHP 226
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