DK960856 |
Clone id |
TST39A01NGRL0008_I16 |
Library |
TST39 |
Length |
633 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_I16. 5' end sequence. |
Accession |
DK960856 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL4181Contig1 |
Sequence |
GTTCGCAGGTCGACGGGTGTCTAGGGTTAGGGTCTGGTTTAGGGAAGAGCACAGAGGGTT CTGATTGTAAACAGGTCGCCATGCCGGCAACAGCAGGACGAGTGCGGATGCCCGCAAACA ACAGGGTGCACAGCAGCGCAGCCCTTCAGACTCACGGCATTTGGCAGAGTGCGATCGGCT ACGATCCGTACGCGCCGGACCAGAAGCAGCCGCCTCCTGCTGCAGATCGTGATGCCCAAG CTTCCCTCGCTGCCCCTTCTGCAGACCAGCAAAACACATATGACAGTTTTCAGGGTCTTC TTGCTCTTGCTCGTCTCACTGGATCTAATGCAGACGAAGCCCGTGGTGCCTGCCGCAAAT GTGGCCGTGTTGGCCATCTTCCATTTCAGTGCCGTAACTTCCTCAAGGATGAATCAGCCT CCGCTGCTGCCGCCGCCGCCGCCGCCGCTGTGTCAATTGTTTCTGGTCATCTGGAGGGGG GGAATGGCTCATCACATCGAAAAGATCGCACCCATGTTAAGAGCAGTCGCAAGGGTCATG CAGCTTCTGATTCCTCATCTGAAGATGAAGAATTCTCTGACACTGGTGATAGCGGGATCT CTGATAGCTCTGCAGACTCTGACATGGAGCGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84Y18 |
Definition |
sp|Q84Y18|CXIP4_ARATH CAX-interacting protein 4 OS=Arabidopsis thaliana |
Align length |
108 |
Score (bit) |
140.0 |
E-value |
4.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NVP6 |
Definition |
tr|A9NVP6|A9NVP6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
108 |
Score (bit) |
142.0 |
E-value |
2.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960856|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_I16, 5' (633 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NVP6|A9NVP6_PICSI Putative uncharacterized protein OS=Picea... 142 2e-32 tr|Q69K05|Q69K05_ORYSJ Os09g0103700 protein OS=Oryza sativa subs... 135 2e-30 tr|A2YYC1|A2YYC1_ORYSI Putative uncharacterized protein OS=Oryza... 135 2e-30 tr|B6TD23|B6TD23_MAIZE CXIP4 OS=Zea mays PE=2 SV=1 133 1e-29 tr|A3B2A1|A3B2A1_ORYSJ Putative uncharacterized protein OS=Oryza... 129 2e-28 tr|A2Y2V3|A2Y2V3_ORYSI Putative uncharacterized protein OS=Oryza... 129 2e-28 tr|B7FHQ7|B7FHQ7_MEDTR Putative uncharacterized protein OS=Medic... 126 1e-27 tr|B6KG82|B6KG82_TOXGO Zinc knuckle domain-containing protein OS... 78 5e-13 tr|A5KB14|A5KB14_PLAVI Putative uncharacterized protein OS=Plasm... 76 2e-12 tr|A2Z1F7|A2Z1F7_ORYSI Putative uncharacterized protein OS=Oryza... 75 3e-12 tr|B3L6I3|B3L6I3_PLAKH Putative uncharacterized protein OS=Plasm... 75 3e-12 tr|Q8I417|Q8I417_PLAF7 Putative uncharacterized protein PFE0425w... 75 4e-12 tr|Q7R8X0|Q7R8X0_PLAYO Expressed protein OS=Plasmodium yoelii yo... 74 6e-12 tr|Q4Z5Q3|Q4Z5Q3_PLABE Putative uncharacterized protein OS=Plasm... 74 6e-12 tr|Q4XTJ0|Q4XTJ0_PLACH Putative uncharacterized protein OS=Plasm... 74 6e-12 tr|Q4YEF7|Q4YEF7_PLABE Putative uncharacterized protein OS=Plasm... 73 1e-11 tr|B6AE83|B6AE83_9CRYT Zinc knuckle family protein OS=Cryptospor... 65 4e-09 tr|Q86AP2|Q86AP2_DICDI Similar to Plasmodium falciparum. Splicin... 52 4e-05 tr|A8J172|A8J172_CHLRE Predicted protein OS=Chlamydomonas reinha... 50 9e-05 tr|B7PCI0|B7PCI0_IXOSC Putative uncharacterized protein OS=Ixode... 49 2e-04 tr|B5Y5I7|B5Y5I7_PHATR Predicted protein OS=Phaeodactylum tricor... 49 3e-04 tr|B4PYS8|B4PYS8_DROYA GE16752 OS=Drosophila yakuba GN=GE16752 P... 48 6e-04 tr|Q9W3Z5|Q9W3Z5_DROME CG3918 OS=Drosophila melanogaster GN=CG39... 47 0.001 tr|B4I0A3|B4I0A3_DROSE GM12492 OS=Drosophila sechellia GN=GM1249... 47 0.001 tr|B5FXB3|B5FXB3_TAEGU Putative uncharacterized protein (Fragmen... 46 0.002 tr|A7TCJ9|A7TCJ9_NEMVE Predicted protein OS=Nematostella vectens... 46 0.002 tr|A7RQN8|A7RQN8_NEMVE Predicted protein OS=Nematostella vectens... 46 0.002 tr|Q17Q99|Q17Q99_BOVIN SFRS12IP1 protein (Fragment) OS=Bos tauru... 45 0.003 tr|B5ME40|B5ME40_HUMAN Putative uncharacterized protein SFRS12IP... 45 0.004 tr|Q08AY4|Q08AY4_XENLA LOC100158386 protein OS=Xenopus laevis GN... 44 0.006
>tr|A9NVP6|A9NVP6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 372
Score = 142 bits (357), Expect = 2e-32 Identities = 72/108 (66%), Positives = 74/108 (68%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXXPS 260 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGY Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNHDSNDNNRDNGHGGVTGPEG 60
Query: 261 ADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQCRNFL 404 + N YDSFQGLLALARLT S ADEARGAC+KC RVGHL FQCRNFL Sbjct: 61 DGENNAYDSFQGLLALARLTSSTADEARGACKKCNRVGHLTFQCRNFL 108
>tr|Q69K05|Q69K05_ORYSJ Os09g0103700 protein OS=Oryza sativa subsp. japonica GN=P0414D03.38 PE=2 SV=1 Length = 377
Score = 135 bits (340), Expect = 2e-30 Identities = 73/125 (58%), Positives = 76/125 (60%), Gaps = 17/125 (13%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXX-- 254 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGY Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPENNKHQPPSSSVSANAAAANA 60
Query: 255 ---------------PSADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQ 389 +A N Y SFQGLLALAR+TGSN+DE RGACRKCGRVGHL FQ Sbjct: 61 AAASAPSASAPSSSSAAASSDNAYTSFQGLLALARITGSNSDETRGACRKCGRVGHLTFQ 120
Query: 390 CRNFL 404 CRNFL Sbjct: 121 CRNFL 125
>tr|A2YYC1|A2YYC1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30349 PE=4 SV=1 Length = 377
Score = 135 bits (340), Expect = 2e-30 Identities = 73/125 (58%), Positives = 76/125 (60%), Gaps = 17/125 (13%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXX-- 254 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGY Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPENNKHQPPSSSVSANAAAANA 60
Query: 255 ---------------PSADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQ 389 +A N Y SFQGLLALAR+TGSN+DE RGACRKCGRVGHL FQ Sbjct: 61 AAASAPSASAPSSSSAAASSDNAYTSFQGLLALARITGSNSDETRGACRKCGRVGHLTFQ 120
Query: 390 CRNFL 404 CRNFL Sbjct: 121 CRNFL 125
>tr|B6TD23|B6TD23_MAIZE CXIP4 OS=Zea mays PE=2 SV=1 Length = 377
Score = 133 bits (334), Expect = 1e-29 Identities = 72/126 (57%), Positives = 76/126 (60%), Gaps = 18/126 (14%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXXPS 260 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGY + Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPENDKQQPGRPSSSVSANAAAA 60
Query: 261 ADQQ------------------NTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPF 386 A N Y SFQGLLALAR+TGSN+DE RGAC+KCGRVGHL F Sbjct: 61 AANDANAAASAAAASGSGSGDGNAYTSFQGLLALARITGSNSDETRGACKKCGRVGHLTF 120
Query: 387 QCRNFL 404 QCRNFL Sbjct: 121 QCRNFL 126
>tr|A3B2A1|A3B2A1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017173 PE=4 SV=1 Length = 297
Score = 129 bits (323), Expect = 2e-28 Identities = 67/109 (61%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXXP- 257 MPATAGRVRMPANNRVHSSAALQTH IWQSAIGY Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHCIWQSAIGYDPYAPAERSKHQAPSSSSVSAAAAAA 60
Query: 258 SADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQCRNFL 404 SA +NTY S+Q LL + R TGS +DE RG CRKCGRVGHL FQCRNFL Sbjct: 61 SAPSENTYTSYQSLLTIIRATGSTSDETRGGCRKCGRVGHLTFQCRNFL 109
>tr|A2Y2V3|A2Y2V3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19342 PE=4 SV=1 Length = 297
Score = 129 bits (323), Expect = 2e-28 Identities = 67/109 (61%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXXP- 257 MPATAGRVRMPANNRVHSSAALQTH IWQSAIGY Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHCIWQSAIGYDPYAPAERSKHQAPSSSSVSAAAAAA 60
Query: 258 SADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQCRNFL 404 SA +NTY S+Q LL + R TGS +DE RG CRKCGRVGHL FQCRNFL Sbjct: 61 SAPSENTYTSYQSLLTIIRATGSTSDETRGGCRKCGRVGHLTFQCRNFL 109
>tr|B7FHQ7|B7FHQ7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 323
Score = 126 bits (316), Expect = 1e-27 Identities = 67/111 (60%), Positives = 74/111 (66%), Gaps = 2/111 (1%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXXPS 260 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGY P+ Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGY--------DPYAPNKDDKDASQSQPN 52
Query: 261 A--DQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQCRNFLK 407 A D N Y SFQGLL LA++T S D +RGAC+KCGRVGHL FQC+N +K Sbjct: 53 AGPDADNAYASFQGLLQLAKITNSEVDVSRGACKKCGRVGHLKFQCKNNVK 103
>tr|B6KG82|B6KG82_TOXGO Zinc knuckle domain-containing protein OS=Toxoplasma gondii ME49 GN=TGME49_044840 PE=4 SV=1 Length = 209
Score = 77.8 bits (190), Expect = 5e-13 Identities = 45/108 (41%), Positives = 54/108 (50%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXXPS 260 MPAT VRMP +NRV S+ L+TH IW+ +G+ + Sbjct: 1 MPATVTNVRMPDSNRVPVSSTLRTHAIWKDTVGHDPYAPTGSEST--------------A 46
Query: 261 ADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQCRNFL 404 A D Q LL LARLTGS A GAC KC +VGHL +QCRN L Sbjct: 47 AADAALRDKAQELLVLARLTGSVASRTPGACPKCKQVGHLAYQCRNML 94
>tr|A5KB14|A5KB14_PLAVI Putative uncharacterized protein OS=Plasmodium vivax GN=PVX_097990 PE=4 SV=1 Length = 270
Score = 75.9 bits (185), Expect = 2e-12 Identities = 40/111 (36%), Positives = 58/111 (52%) Frame = +3
Query: 81 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYXXXXXXXXXXXXXXXXXXXXXXXXPS 260 MP+ AGRVRMP +NR+ SA+L+T IW++++GY Sbjct: 1 MPSKAGRVRMPPDNRLPVSASLKTSDIWKNSVGYDPYASVEEINKRELKKK--------E 52
Query: 261 ADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQCRNFLKDE 413 A + + + L +LARLTG+ + GAC C +GHLP+QCRN + E Sbjct: 53 ATNEEINEKAKSLFSLARLTGTASATIPGACSLCNHIGHLPYQCRNLISLE 103
>tr|A2Z1F7|A2Z1F7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31439 PE=4 SV=1 Length = 220
Score = 75.1 bits (183), Expect = 3e-12 Identities = 33/49 (67%), Positives = 36/49 (73%) Frame = +3
Query: 258 SADQQNTYDSFQGLLALARLTGSNADEARGACRKCGRVGHLPFQCRNFL 404 +A N Y S+Q LL L R TGS +DE RG CRKCGRVGHL FQCRNFL Sbjct: 91 AASSDNAYTSYQSLLTLIRATGSTSDETRGGCRKCGRVGHLTFQCRNFL 139
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