DK960861 |
Clone id |
TST39A01NGRL0008_I21 |
Library |
TST39 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_I21. 5' end sequence. |
Accession |
DK960861 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL67Contig1 |
Sequence |
GCGAAGTAGCATCCACGCTCTTGCGCTCTCTGCACAGAGAACTGCAAGATCCGTCGCCAT GTATACTGCTCGGAGGAAGATCCACAAGGAGAAGGGGCTGGAGCCAGATGATTTTGAGGA GTCCGTTGCTCAGGCTCTTTTCTATCTGGAGAACTCAAACCAGGAATTGAAGAGTGACCT GCGAGACCTTTTCATCAACTCTGCCAAGCAGGTTGATATTTCAGGAAGCCGGAAGGCTGT TATCATCCACGTGCCTTACAGGCTCTGCAAAGCCTTCCGAAAAATTCACTCTCGTCTTGT CCGGGAGTTGGAGAAGAAGTTCAGTGGGAAGGATGTTATTATGATTGCCACTAGACGTAT TTTGAGGCCTCCAAAGAAAGGGACGGCTGTAGCTCGCCCTCGTAATCGTACACTAACAGC TGTTCATGAAGCTATTCTCGAAGATTTGGTGTACCCGGCTGAGATTGTTGGAAAGCGAGT ACGCTTCCGTCTGGATGGTTCAAGAATCATGCGGGTGTATTTAGATCCAAAGGAAAGGAA CAGCACTGAGTACAAGTTGGAAACATTCAGCGGAGTTTATAAGAAGCTGACCGGCAAGGA AGTAGTGTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZNS1 |
Definition |
sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 OS=Avicennia marina |
Align length |
179 |
Score (bit) |
284.0 |
E-value |
3.0e-76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
178 |
Score (bit) |
310.0 |
E-value |
5.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960861|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_I21, 5' (596 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 310 5e-83 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 307 3e-82 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 303 4e-81 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 303 5e-81 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 299 7e-80 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 291 1e-77 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 289 7e-77 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 287 4e-76 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 286 6e-76 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 286 6e-76 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 286 6e-76 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 286 6e-76 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 285 1e-75 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 285 2e-75 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 284 2e-75 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 284 3e-75 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 283 5e-75 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 283 5e-75 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 283 7e-75 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 282 1e-74 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 280 3e-74 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 280 6e-74 tr|A9PBB9|A9PBB9_POPTR Putative uncharacterized protein OS=Popul... 280 6e-74 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 279 8e-74 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 278 1e-73 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 278 2e-73 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 276 5e-73 tr|A9PBV3|A9PBV3_POPTR Putative uncharacterized protein OS=Popul... 276 5e-73 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 276 6e-73 tr|A3B2X6|A3B2X6_ORYSJ Putative uncharacterized protein OS=Oryza... 271 2e-71
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 310 bits (793), Expect = 5e-83 Identities = 154/178 (86%), Positives = 172/178 (96%) Frame = +2
Query: 62 YTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKAV 241 +TARRKI KEKG EPD+FEESVAQALF LE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 242 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 421 +IHVPYRL KAF+KIH+RLVRELEKKFSGKDVI+IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 VIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 422 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERNSTEYKLETF+GVYKKLTG Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNSTEYKLETFAGVYKKLTG 180
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 307 bits (786), Expect = 3e-82 Identities = 152/178 (85%), Positives = 171/178 (96%) Frame = +2
Query: 62 YTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKAV 241 +TARRKI KEKG EPD+FEESVAQALF LE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 242 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 421 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLT Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIATRRILRPPKKGSAVNRPRSRTLTT 122
Query: 422 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERN+TEYKLETF+GVYKKLTG Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKLETFAGVYKKLTG 180
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 303 bits (777), Expect = 4e-81 Identities = 150/178 (84%), Positives = 172/178 (96%) Frame = +2
Query: 62 YTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKAV 241 +TARRKI KEKG EPD+FEESVAQALF LE+++ ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTSSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 242 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 421 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 422 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 VHEA+LEDLV+P+EIVGKRVR+RLDGSRIMRVYLDPKERN+TEYKL+TF+GVYKKLTG Sbjct: 123 VHEAVLEDLVHPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKLDTFAGVYKKLTG 180
>tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172596 PE=4 SV=1 Length = 195
Score = 303 bits (776), Expect = 5e-81 Identities = 150/178 (84%), Positives = 169/178 (94%) Frame = +2
Query: 62 YTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKAV 241 +TARRKI KE G EPD+FEESVAQALF LE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKENGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 242 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 421 IIHVP+RL KAF+KIH+RLVRELEKKFSGKDV+ I TRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPFRLRKAFQKIHARLVRELEKKFSGKDVVFIVTRRILRPPKKGSAVNRPRSRTLTA 122
Query: 422 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 VHEA+LEDLVYP+EIVGKR+R+RLDGSRIMRVYLDPKERNSTEYKLET+SGVYKKLTG Sbjct: 123 VHEAVLEDLVYPSEIVGKRMRYRLDGSRIMRVYLDPKERNSTEYKLETYSGVYKKLTG 180
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 299 bits (766), Expect = 7e-80 Identities = 147/179 (82%), Positives = 167/179 (93%) Frame = +2
Query: 59 MYTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKA 238 MYTARRKI KEK EP++FEESVAQALF LE++NQELKS+L+DLFINSA Q DISG+RKA Sbjct: 1 MYTARRKIQKEKNAEPNEFEESVAQALFDLESTNQELKSELKDLFINSASQYDISGNRKA 60
Query: 239 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 418 V++HVPYRL KAFRKIH RLVRELEKKFSGKDV++IATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAAVRPRSRTLT 120
Query: 419 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 AVHEAILEDLVYPAEIVGKRVR+RLDGS+IM++YLDPKERN+TEYKLETF GVY+KL G Sbjct: 121 AVHEAILEDLVYPAEIVGKRVRYRLDGSKIMKIYLDPKERNNTEYKLETFGGVYRKLCG 179
>tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 191
Score = 291 bits (746), Expect = 1e-77 Identities = 140/179 (78%), Positives = 168/179 (93%) Frame = +2
Query: 59 MYTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKA 238 MYTAR+KI KEK +EP +FEE VAQALF LEN+NQELKSDL+DL+INSA Q+D++G+RKA Sbjct: 1 MYTARKKIQKEKDVEPTEFEEIVAQALFDLENTNQELKSDLKDLYINSAVQIDVAGNRKA 60
Query: 239 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 418 V+IHVPYRL KAFRKIH RLVRE+EKKFSGKDVI IATRRILRPPKKG+AV RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVREMEKKFSGKDVIFIATRRILRPPKKGSAVVRPRSRTLT 120
Query: 419 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 VHEA+LED+VYPAEIVGKR+R+RLDGS+I++++LDPKERN+TEYKL++F+GVY+KLTG Sbjct: 121 HVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIFLDPKERNNTEYKLDSFAGVYRKLTG 179
>tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 189
Score = 289 bits (740), Expect = 7e-77 Identities = 138/177 (77%), Positives = 167/177 (94%) Frame = +2
Query: 59 MYTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKA 238 M+TAR+KI K+K LEP +FEESVAQALF LEN+NQELKSDLRDL+INSA Q+D++G+RKA Sbjct: 1 MFTARKKIQKDKDLEPSEFEESVAQALFDLENNNQELKSDLRDLYINSAVQMDVAGNRKA 60
Query: 239 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 418 V+IH+PYRL KA+RKIH RLVRELEKKFSGKDVI+IATRRILRPPKKG+A+ RPR+RTLT Sbjct: 61 VVIHIPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAIVRPRSRTLT 120
Query: 419 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKL 589 AVH+A LED+VYPAEIVGKR+R+ LDGS+I++++LDPKERN+TEYKLETF+GVY+KL Sbjct: 121 AVHDATLEDVVYPAEIVGKRIRYHLDGSKIIKIFLDPKERNTTEYKLETFTGVYRKL 177
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 287 bits (734), Expect = 4e-76 Identities = 138/179 (77%), Positives = 165/179 (92%) Frame = +2
Query: 59 MYTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKA 238 MYTAR+KI KEKGLEP +FE+SVAQA F LEN NQELKSDL+DL+IN+A Q+D++GSRKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINNAIQMDVTGSRKA 60
Query: 239 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 418 V+IHVPYRL KAFRKIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVLRPRTRTLT 120
Query: 419 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 AVH+ ILED+VYPAEIVGKRVR+RLDGS+I++++LDPKERN+TEYKLET + VY++L G Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLETCTAVYRRLCG 179
>tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subsp. japonica GN=Os03g0297100 PE=2 SV=1 Length = 192
Score = 286 bits (732), Expect = 6e-76 Identities = 135/179 (75%), Positives = 166/179 (92%) Frame = +2
Query: 59 MYTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKA 238 MYTAR+KI KEKGLEP +FE+SVAQA F LEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 239 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 418 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 419 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+TEYKLETFS VY++L G Sbjct: 121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCG 179
>tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expressed (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g18580 PE=4 SV=1 Length = 192
Score = 286 bits (732), Expect = 6e-76 Identities = 135/179 (75%), Positives = 166/179 (92%) Frame = +2
Query: 59 MYTARRKIHKEKGLEPDDFEESVAQALFYLENSNQELKSDLRDLFINSAKQVDISGSRKA 238 MYTAR+KI KEKGLEP +FE+SVAQA F LEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 239 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 418 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 419 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTG 595 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+TEYKLETFS VY++L G Sbjct: 121 AVHDCILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCG 179
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