DK960862 [AcEST]

DK960862
Clone id	TST39A01NGRL0008_I22
Library	TST39
Length	695
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_I22. 5' end sequence.
Accession	DK960862
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL3024Contig1
Sequence	AATTAATGTGTGTGCATTATAGGCCACCTGTAGATCTCCCTCCTCCACCAGCTCACATAC CCCTCAAATGTGCTTAGCTTCCTGTGATGCGCTGTCGTAAATCGCTTGCTTCTCTACCCA ATTTGCAGCATTAGCGTTGGGACTGTTTTTCCCATAGCTATCCCAAACCACATTGCTTGC TTCTCTGCAAATTCGCAGCTTTAGCATTAGAATTGATTATCCCATCTCTCTCATTTGCGT CTCTTATCTGTGGTGGCTCATCGATCCAATGTGCTTCAGAAGCTCTATTAGTCGGATCAG CCCATTGTCCATGCACACGGACTAATCCCATTGCTCTAGCATCAGGCTGCCACAGATCCA TTGGCCTTGCAAGACTTGACAGAAATGCCAGAAAGGGCTAAAATGGGATATCTCAGAAGC AGCAAATCTATCAAGAGAATGCAGGTACTTACATTATGGTTGTGTGTAACAATGGTGCCC ATCAGCATTGTCATGGGACAAAGTGCCCCAGCCACAGCTCCGACAACGGCCGCAGCCTCG CCGCCTGTAGCCAGCAAGGCAGCAGCTCCACCTCCTACAGCCACAAAAGCTTCCACACCT CCCACTGCTGCCACCGCCCCAAAAGCCTCACCACCACCAGCTGTGGTGGCGGCACCACCT CCAAAGCCTACTGCCGTACCACCTNGTTGCTGCCC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P04706
Definition	sp\|P04706\|GLU2_MAIZE Glutelin-2 OS=Zea mays
Align length	17
Score (bit)	32.3
E-value	2.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960862\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_I22, 5' (695 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P04706\|GLU2_MAIZE Glutelin-2 OS=Zea mays PE=1 SV=1 32 2.5 >sp\|P04706\|GLU2_MAIZE Glutelin-2 OS=Zea mays PE=1 SV=1 Length = 223 Score = 32.3 bits (72), Expect = 2.5 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +3 Query: 12 VHYRPPVDLPPPPAHIP 62 VH PPV LPPPP H P Sbjct: 70 VHVPPPVHLPPPPCHYP 86
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK960862\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_I22, 5' (695 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****