DK960864 |
Clone id |
TST39A01NGRL0008_I24 |
Library |
TST39 |
Length |
656 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_I24. 5' end sequence. |
Accession |
DK960864 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL487Contig1 |
Sequence |
ATTGAATTGACCTCGCGCAGAGAGAGGGTGGCTATGGCATCTCTTTCCTTCGATCAGCTA GTAGCATCCTCTTCGAACCCAGACTTTTCCTCTACTAAATGCAGGCTTGGCTCATACCCA TCTTACCGTGGATTTCATTCCCATTCTCTCCAGGCTCGCTCTAGTCAGAGGCCTCTGCGC AGGACATTCTTCATCAATCAACAAGCTGCCTTTTGCGCTCGAGCTGATGTCGCAGCTGTA ACGCTTCCCAATGAGATTAAGTCAAGTTTAGAAATTGATTGGGACAATCTGGGTTTTGGA TACCATGAAACTGATTTCATATATGTTTCGAAATGTGGCCCGGACGGTGAATGGAATAAA GGAGAATTAGAACCTTTTGGTCCTTTGAAGCTAAGCCCTTCAGCTGGTATATTGAATTAT GGACAGGGAATCTTCGAAGGTCTGAAGGCGTACAAAACTGAGGATGATCGCGTGCTGCTT TTTAGGCCCGAGGAAAATGCCATGCGAATGATAGTTGGTGCAGATCGTTTGTGTATGCCA ACACTACCTGTTAACCTCTTCGTCCAGGCAGTGAAGCAAACTGTGCTAGCCAATAAACGA TGGATTCCTCCTCCAGGGAAGGGGTCTCTTTATATCCGTCCTATACTCATGGGATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FYA6 |
Definition |
sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana |
Align length |
211 |
Score (bit) |
205.0 |
E-value |
1.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960864|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_I24, 5' (656 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase... 205 1e-52 sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase... 186 1e-46 sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase... 182 1e-45 sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase... 174 5e-43 sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotr... 173 8e-43 sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase... 168 3e-41 sp|Q9LE06|BCAT4_ARATH Probable branched-chain-amino-acid aminotr... 161 2e-39 sp|P54689|ILVE_HAEIN Branched-chain-amino-acid aminotransferase ... 121 3e-27 sp|Q9ZJF1|ILVE_HELPJ Branched-chain-amino-acid aminotransferase ... 116 9e-26 sp|O26004|ILVE_HELPY Branched-chain-amino-acid aminotransferase ... 114 6e-25 sp|O31461|YBGE_BACSU Putative branched-chain-amino-acid aminotra... 112 2e-24 sp|P39576|ILVE_BACSU Putative branched-chain-amino-acid aminotra... 107 4e-23 sp|O86505|ILVE_STRCO Probable branched-chain-amino-acid aminotra... 106 9e-23 sp|Q10399|ILVE_MYCTU Probable branched-chain-amino-acid aminotra... 97 6e-20 sp|A7SLW1|BCAT_NEMVE Branched-chain-amino-acid aminotransferase ... 96 1e-19 sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotra... 96 2e-19 sp|O32954|ILVE_MYCLE Probable branched-chain-amino-acid aminotra... 96 2e-19 sp|P63513|ILVE_STAAW Probable branched-chain-amino-acid aminotra... 94 6e-19 sp|Q6GBT3|ILVE_STAAS Probable branched-chain-amino-acid aminotra... 94 6e-19 sp|P99138|ILVE_STAAN Probable branched-chain-amino-acid aminotra... 94 6e-19 sp|P63512|ILVE_STAAM Probable branched-chain-amino-acid aminotra... 94 6e-19 sp|Q5HIC1|ILVE_STAAC Probable branched-chain-amino-acid aminotra... 94 6e-19 sp|Q5HRJ8|ILVE_STAEQ Probable branched-chain-amino-acid aminotra... 94 8e-19 sp|Q8CQ78|ILVE_STAES Probable branched-chain-amino-acid aminotra... 93 1e-18 sp|O35854|BCAT2_RAT Branched-chain-amino-acid aminotransferase, ... 89 2e-17 sp|O35855|BCAT2_MOUSE Branched-chain-amino-acid aminotransferase... 89 2e-17 sp|O14370|BCA1_SCHPO Branched-chain-amino-acid aminotransferase,... 88 3e-17 sp|P47176|BCA2_YEAST Branched-chain-amino-acid aminotransferase,... 88 5e-17 sp|P54688|BCAT_CAEEL Branched-chain-amino-acid aminotransferase,... 87 6e-17 sp|P24288|BCAT1_MOUSE Branched-chain-amino-acid aminotransferase... 87 6e-17
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Length = 415
Score = 205 bits (522), Expect = 1e-52 Identities = 105/211 (49%), Positives = 139/211 (65%) Frame = +1
Query: 22 ERVAMASLSFDQLVASSSNPDFSSTKCRLGSYPSYRGFHSHSLQARSSQRPLRRTFFINQ 201 ER A+AS + +S S+T RL S S R F S SL+ R P+ F +++ Sbjct: 2 ERSAVASGFHRNYILCASRAATSTT--RLHSLSSLRNFPSSSLRIRHCPSPISSNFIVSE 59
Query: 202 QXXXXXXXXXXXVTLPNEIKSSLEIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFG 381 T ++ EIDWD + FG TD++Y KC DGE+++G+L+PFG Sbjct: 60 VSRNRRCDAVSSST--TDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFG 117
Query: 382 PLKLSPSAGILNYGQGIFEGLKAYKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLF 561 + ++P+AG+LNYGQG+FEGLKAY+ +D +LLFRPEENA+RM GA+R+CMP+ V F Sbjct: 118 NIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQF 177
Query: 562 VQAVKQTVLANKRWIPPPGKGSLYIRPILMG 654 V+AVK TVLANKRWIPPPGKGSLYIRP+LMG Sbjct: 178 VEAVKTTVLANKRWIPPPGKGSLYIRPLLMG 208
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Length = 413
Score = 186 bits (471), Expect = 1e-46 Identities = 84/129 (65%), Positives = 107/129 (82%), Gaps = 1/129 (0%) Frame = +1
Query: 271 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 450 +IDWD +GFG D++YV KC DGE++KGEL+ FG +++SPSAG+LNYGQG+FEGLKA Sbjct: 78 DIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKA 137
Query: 451 YKTED-DRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKGS 627 Y+ +D + +LLFRPEENA RM GA+R+CMP V FV+AV +TVLANKRW+PPPGKGS Sbjct: 138 YRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGS 197
Query: 628 LYIRPILMG 654 LY+RP+LMG Sbjct: 198 LYVRPLLMG 206
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Length = 388
Score = 182 bits (463), Expect = 1e-45 Identities = 80/128 (62%), Positives = 106/128 (82%) Frame = +1
Query: 271 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 450 ++DWDNLGFG + D++YV KC DGE+ +GEL P+G ++LSPSAG+LNYGQ I+EG KA Sbjct: 55 DLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKA 114
Query: 451 YKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKGSL 630 Y+ E+ ++LLFRP+ NA+RM +GA+R+ MP+ V+ FV AVKQT LANKRW+PP GKG+L Sbjct: 115 YRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTL 174
Query: 631 YIRPILMG 654 YIRP+LMG Sbjct: 175 YIRPLLMG 182
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Length = 384
Score = 174 bits (440), Expect = 5e-43 Identities = 77/128 (60%), Positives = 103/128 (80%) Frame = +1
Query: 271 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 450 ++DWDNLGF TDF++ +K DG + +G L +G ++L+P+AGILNYGQG+ EG+KA Sbjct: 51 DVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKA 110
Query: 451 YKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKGSL 630 Y+ ED RVLLFRPE NAMRM +GA+R+CM + V+ F++ VKQTVLAN+RW+PPPGKGSL Sbjct: 111 YRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSL 170
Query: 631 YIRPILMG 654 Y+RP+L G Sbjct: 171 YLRPLLFG 178
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Length = 367
Score = 173 bits (438), Expect = 8e-43 Identities = 77/127 (60%), Positives = 99/127 (77%) Frame = +1
Query: 274 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 453 + WD LGF TD++YV+KC ++ GE+ P+G + +SP AGILNYGQG+FEGLKAY Sbjct: 24 VKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAY 83
Query: 454 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKGSLY 633 +TED R+ LFRP++NA+RM GADRLCM FV+AVKQTVLAN +W+PPPGKG+LY Sbjct: 84 RTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKGALY 143
Query: 634 IRPILMG 654 IRP+L+G Sbjct: 144 IRPLLIG 150
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Length = 356
Score = 168 bits (425), Expect = 3e-41 Identities = 72/127 (56%), Positives = 100/127 (78%) Frame = +1
Query: 274 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 453 + W+ LGF D++YV+KC + +G++ P+G + +SP + ILNYGQG+FEGLKAY Sbjct: 21 VKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAY 80
Query: 454 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKGSLY 633 +TEDDR+ +FRP++NA+RM GA+RLCM + FV+AVKQTVLANK+W+PPPGKG+LY Sbjct: 81 RTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTLY 140
Query: 634 IRPILMG 654 IRP+L+G Sbjct: 141 IRPLLLG 147
>sp|Q9LE06|BCAT4_ARATH Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1 Length = 354
Score = 161 bits (408), Expect = 2e-39 Identities = 71/127 (55%), Positives = 96/127 (75%) Frame = +1
Query: 274 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 453 + W+ L F + TD++YV+KC + +G++ PF L+L+P A +L YGQG++EGLKAY Sbjct: 20 VKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAY 79
Query: 454 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKGSLY 633 +TED R+LLFRP++N +R+ GADRL MP V+ FV A+KQ LANK+WIPPPGKG+LY Sbjct: 80 RTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKGTLY 139
Query: 634 IRPILMG 654 IRPIL G Sbjct: 140 IRPILFG 146
>sp|P54689|ILVE_HAEIN Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1 Length = 343
Score = 121 bits (304), Expect = 3e-27 Identities = 60/129 (46%), Positives = 87/129 (67%), Gaps = 1/129 (0%) Frame = +1
Query: 271 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 450 ++DW+NLGF Y +TD+ +++ DG+W++G+L L + + L+YGQ FEGLKA Sbjct: 3 DLDWNNLGFSYIKTDYRFIAHW-KDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKA 61
Query: 451 YKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKG-S 627 Y+ +D + LFRP+ NA RM ADRL MP +P LFV+A K+ V AN+ W+ P G G + Sbjct: 62 YRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSGAT 121
Query: 628 LYIRPILMG 654 LY+RP L+G Sbjct: 122 LYLRPFLIG 130
>sp|Q9ZJF1|ILVE_HELPJ Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1 Length = 340
Score = 116 bits (291), Expect = 9e-26 Identities = 56/128 (43%), Positives = 85/128 (66%), Gaps = 1/128 (0%) Frame = +1
Query: 274 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 453 +DW NLGF Y +TDF +++ +G W++GEL L+LS + +L+YGQ FEGLKAY Sbjct: 7 LDWKNLGFSYIKTDFRFIATY-KNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAY 65
Query: 454 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKG-SL 630 +++ + LLFRP ENA R+ +RL MP + LF++A + + AN++W+ P G SL Sbjct: 66 RSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASL 125
Query: 631 YIRPILMG 654 Y+RP ++G Sbjct: 126 YLRPFVIG 133
>sp|O26004|ILVE_HELPY Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1 Length = 340
Score = 114 bits (284), Expect = 6e-25 Identities = 56/128 (43%), Positives = 84/128 (65%), Gaps = 1/128 (0%) Frame = +1
Query: 274 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 453 +DW NLGF Y +TDF +++ +G W++G L L+LS + +L+YGQ FEGLKAY Sbjct: 7 LDWKNLGFSYIKTDFRFIATY-KNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAY 65
Query: 454 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPGKG-SL 630 +++ + LLFRP ENA R+ +RL MP + LF++A + V AN++W+ P G SL Sbjct: 66 RSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASL 125
Query: 631 YIRPILMG 654 Y+RP ++G Sbjct: 126 YLRPFVIG 133
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0WQT2 |
Definition |
tr|Q0WQT2|Q0WQT2_ARATH Branched-chain amino acid aminotransferase OS=Arabidopsis thaliana |
Align length |
211 |
Score (bit) |
205.0 |
E-value |
2.0e-51 |
Report |
|