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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960871
Clone id TST39A01NGRL0008_J07
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGAGAAGGAGAGGGGGCCCGAGAGGGAGAAGCTCGTGTTTGTTTGCAGAAATGGCTGCC
ATGCAGGCGACATTGGGCGTTTCCTGCCCTTCTTCGTCTCTATGCAAGTCGTCTTTCTTG
GGGAGCGCCTCTCGTCTTTCTCGGGTGGCCTCTGCTATTGCCCCTTCCCCTGTCCGTGCC
TTCAAGGTCGAGGCAAAGAAAGGCGAATGGCTTCCCGGTCTGGCATCCCCTGCTTACCTA
GACGGAAACCTTGCTGGTGACAATGGCTTCGACCCCCTTGGCTTGGCTGAGGATCCTGCC
AACCTTAAATGGTATGTGCAAGCAGAGCTTCAAAATGGAAGATGGGCAATGCTTGGAGTA
GCTGGCATGTTGATCCCCGACCTCTTGACAAAGATTGGTATCATCAATGTTCCTGCATGG
TATGATGCGGGCAAGGTCGAGTACTTCGCCCCCGCCTCCACTCTCTTTGTGATCGAATTC
ATCTTGTTCCACTATGTGGAGGTGAGAAGATGGCAAGACATCAAGTACCCTGGCAGTGTG
AATGCCGATCCGTTCAACCCTAAGCTTACTCTGCCCCCTG
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 133
Score (bit) 231.0
E-value 2.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960871|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J07, 5'
         (580 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   231   2e-60
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   225   1e-58
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   172   1e-42
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   160   4e-39
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   155   1e-37
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    94   5e-19
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    94   5e-19
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    91   4e-18
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    91   4e-18
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    85   2e-16
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    83   9e-16
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    77   5e-14
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    68   4e-11
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    66   1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   1e-10
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    65   3e-10
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    62   2e-09
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    62   3e-09
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    61   5e-09
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    59   2e-08
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    59   2e-08
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    59   2e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    58   3e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    58   3e-08
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    58   4e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    58   4e-08
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    58   4e-08

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  231 bits (590), Expect = 2e-60
 Identities = 108/133 (81%), Positives = 119/133 (89%)
 Frame = +1

Query: 178 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 357
           +FKVEAKKGEWLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+VQAEL NGRWAMLG
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 358 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGS 537
           VAGML+P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGS
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGS 166

Query: 538 VNADPFNPKLTLP 576
           VN DP   + +LP
Sbjct: 167 VNQDPIFKQYSLP 179


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  225 bits (574), Expect = 1e-58
 Identities = 106/137 (77%), Positives = 117/137 (85%)
 Frame = +1

Query: 166 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 345
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 346 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 525
           AMLGVAGML+P++ T IGIINVP WY AGK EYFA +STLFVIEFIL HYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIK 161

Query: 526 YPGSVNADPFNPKLTLP 576
            PGSVN DP   + +LP
Sbjct: 162 NPGSVNQDPIFKQYSLP 178


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  172 bits (435), Expect = 1e-42
 Identities = 89/148 (60%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
 Frame = +1

Query: 139 SRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYV 318
           S  AS    S  R   V+AK G WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+V
Sbjct: 14  SPAASGSPRSTRRDVAVQAK-GSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 319 QAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHY 495
           QA++ NGRWAMLGVAGMLIP++LTK G++N P W    GK  YFA +ST   +  +   Y
Sbjct: 73  QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTY 131

Query: 496 VEVRRWQDIKYPGSVNADPFNPKLTLPP 579
           VE+RRWQDIK PGSVN DP     +LPP
Sbjct: 132 VEIRRWQDIKNPGSVNQDPIFKSYSLPP 159


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  160 bits (405), Expect = 4e-39
 Identities = 81/150 (54%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
 Frame = +1

Query: 142 RVASAIAPSPVRAFKVEAKKGE-----WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL 306
           RV+  IAP   R+  V A   +     W PG   P +LDG+L GD GFDPLGL  DP +L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 307 KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFIL 486
           KW  QAEL + RWAMLG AG+ IP+ LTKIG++N P+WY AG+ EYF   +TLFVIE +L
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 487 FHYVEVRRWQDIKYPGSVNADPF--NPKLT 570
             + E RRW DI  PG VN DP   N KLT
Sbjct: 161 IGWAEGRRWADIIKPGCVNTDPIFPNNKLT 190



 Score = 33.9 bits (76), Expect = 0.60
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 241 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 408
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  155 bits (392), Expect = 1e-37
 Identities = 73/123 (59%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = +1

Query: 208 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 387
           W PG   P +LDG+L GD GFDPLGLA DP +L+W  QAEL + RWAMLG AG+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 388 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF--NP 561
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + E RRW DI  PG VN DP   N 
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNN 187

Query: 562 KLT 570
           KLT
Sbjct: 188 KLT 190



 Score = 33.9 bits (76), Expect = 0.60
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 241 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 408
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 94.0 bits (232), Expect = 5e-19
 Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
 Frame = +1

Query: 139 SRVASAIAPSPVRAFKVEAKKGEWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPA 300
           +RV  A  P         AKK  W+P       L  P +LDG+L GD GFDPLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 301 NLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFV 471
            LKWY +AEL +GRWAM  V G+ +    + I       W++AG      AP S  TL  
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLG 145

Query: 472 IEFILFHYVEVRRWQDIKYPGSVNADPFNP 561
            + IL  +VE +RW D   P S + +   P
Sbjct: 146 TQLILMGWVESKRWVDFFDPDSQSVEWATP 175


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score = 94.0 bits (232), Expect = 5e-19
 Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
 Frame = +1

Query: 133 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL-- 306
           + S V  A +  PV   K  A +  W     S +YLDG L GD GFDPLGL+ DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 307 ----KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYF 447
               KW    E+ NGR+AMLG AG + P++L K G+I      AW+       AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 448 APASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 555
           A   TLFV+E  L  + E RR+QD   PGS+    F
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 185



 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +1

Query: 211 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLT 390
           L G   PAY  G L     F+PLG  +D  ++K     E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 391 KIG 399
            +G
Sbjct: 247 GVG 249


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 90.9 bits (224), Expect = 4e-18
 Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
 Frame = +1

Query: 193 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 354
           A K  W+P +        P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAML
Sbjct: 55  APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

Query: 355 GVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPG 534
            V G+ +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P 
Sbjct: 115 AVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPD 171

Query: 535 SVNADPFNP 561
           S + +   P
Sbjct: 172 SQSVEWATP 180


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 90.9 bits (224), Expect = 4e-18
 Identities = 59/149 (39%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
 Frame = +1

Query: 154 AIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWY 315
           A A  PV+   V+  +  W     S +YLDG+L GD GFDPLGL+ DP         +W 
Sbjct: 42  AAATPPVKQGGVD--RPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWL 98

Query: 316 VQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLF 468
              E+ NGR+AMLG  G + P+ L K+G+I      AW+       AG   Y+A   TLF
Sbjct: 99  AYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 158

Query: 469 VIEFILFHYVEVRRWQDIKYPGSVNADPF 555
           V+E  L  + E RR+QD   PGS+    F
Sbjct: 159 VLEMALMGFAEHRRFQDWAKPGSMGKQYF 187



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 24/61 (39%), Positives = 33/61 (54%)
 Frame = +1

Query: 217 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKI 396
           G  +PAY  G       F+PLG  +D  +LK     E++NGR AML + G  I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 397 G 399
           G
Sbjct: 251 G 251


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
 Frame = +1

Query: 193 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 354
           A K  W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM 
Sbjct: 50  APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 355 GVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQD 519
            V G+ +    + I       W++AG      AP S  +L   + +L  +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVD 161
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 173
Score (bit) 242.0
E-value 1.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960871|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J07, 5'
         (580 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   242   1e-62
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   241   3e-62
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   239   1e-61
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   237   4e-61
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   237   4e-61
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   236   7e-61
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   233   8e-60
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   232   1e-59
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   231   2e-59
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   231   3e-59
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   229   6e-59
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   229   8e-59
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   229   8e-59
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   226   5e-58
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   224   3e-57
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   223   8e-57
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   221   2e-56
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   218   3e-55
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   218   3e-55
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   218   3e-55
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   216   1e-54
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   214   3e-54
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   211   2e-53
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   211   2e-53
tr|B6DYZ8|B6DYZ8_LIQST Chloroplast chlorophyll a-b binding prote...   188   2e-46
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   187   3e-46
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   186   6e-46
tr|B6DZ26|B6DZ26_9MAGN Chloroplast chlorophyll a-b binding prote...   186   8e-46
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   186   8e-46
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   186   8e-46

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  242 bits (618), Expect = 1e-62
 Identities = 121/173 (69%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
 Frame = +1

Query: 64  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 240
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 241 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 420
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGLINVPKW 125

Query: 421 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPP 579
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP   + +LPP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPLFKQYSLPP 178


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  241 bits (614), Expect = 3e-62
 Identities = 114/146 (78%), Positives = 128/146 (87%)
 Frame = +1

Query: 142 RVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQ 321
           RV     P+P R+FKVEAK GEWLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQ
Sbjct: 27  RVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 322 AELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVE 501
           AEL NGRWAMLGVAGMLIP++LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 502 VRRWQDIKYPGSVNADPFNPKLTLPP 579
           +RRWQDIKYPGSVN DP   + +LPP
Sbjct: 146 LRRWQDIKYPGSVNQDPLFKQYSLPP 171


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  239 bits (609), Expect = 1e-61
 Identities = 120/173 (69%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
 Frame = +1

Query: 64  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 240
           QATLGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP YL
Sbjct: 7   QATLGVSCRSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPTYL 65

Query: 241 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 420
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT  G I+VP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKW 125

Query: 421 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPP 579
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP     +LPP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPVFKNYSLPP 178


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  237 bits (604), Expect = 4e-61
 Identities = 111/149 (74%), Positives = 124/149 (83%)
 Frame = +1

Query: 133 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKW 312
           +L+R  S    +   +FKVEAKKGEWLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKW
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 313 YVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFH 492
           Y+QAEL NGRWAMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 493 YVEVRRWQDIKYPGSVNADPFNPKLTLPP 579
           YVE+RRWQDIK PG VN DP     +LPP
Sbjct: 149 YVEIRRWQDIKNPGCVNQDPIFKNYSLPP 177


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  237 bits (604), Expect = 4e-61
 Identities = 110/138 (79%), Positives = 120/138 (86%)
 Frame = +1

Query: 166 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 345
           S  R+FKVEAKKGEWLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYVQAEL N RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 346 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 525
           AMLGVAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 526 YPGSVNADPFNPKLTLPP 579
            PGSVN DP     +LPP
Sbjct: 162 NPGSVNQDPIFKNYSLPP 179


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  236 bits (602), Expect = 7e-61
 Identities = 118/173 (68%), Positives = 132/173 (76%), Gaps = 1/173 (0%)
 Frame = +1

Query: 64  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 240
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 241 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 420
           +G+L GDNG DPLGLAEDP +LKWYVQAEL NGRWAMLGVAGM IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIPEVLTSIGLINVPKW 125

Query: 421 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPP 579
           YDAGKVEYFA + TLFVIEFILFHYVE+RRWQDIKYPGSVN DP     +LPP
Sbjct: 126 YDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYPGSVNQDPIXKSYSLPP 178


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  233 bits (593), Expect = 8e-60
 Identities = 109/137 (79%), Positives = 119/137 (86%)
 Frame = +1

Query: 166 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 345
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 346 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 525
           AMLGVAGML+P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 526 YPGSVNADPFNPKLTLP 576
            PGSVN DP   + +LP
Sbjct: 162 NPGSVNQDPIFKQYSLP 178


>tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=cab1 PE=2 SV=1
          Length = 251

 Score =  232 bits (592), Expect = 1e-59
 Identities = 107/138 (77%), Positives = 119/138 (86%)
 Frame = +1

Query: 166 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 345
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGLAEDP NLKW++QAEL NGRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRW 101

Query: 346 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 525
           AMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 526 YPGSVNADPFNPKLTLPP 579
            PGSVN DP     +LPP
Sbjct: 162 NPGSVNQDPIFKSYSLPP 179


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  231 bits (590), Expect = 2e-59
 Identities = 108/138 (78%), Positives = 120/138 (86%)
 Frame = +1

Query: 166 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 345
           S   + KVEAKKGEWLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+VQAEL NGRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 346 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 525
           AMLGVAGML+P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 526 YPGSVNADPFNPKLTLPP 579
            PGSVN DP   + +LPP
Sbjct: 162 NPGSVNQDPIFKQYSLPP 179


>tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 251

 Score =  231 bits (588), Expect = 3e-59
 Identities = 106/138 (76%), Positives = 118/138 (85%)
 Frame = +1

Query: 166 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 345
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGL EDP NLKW++QAEL NGRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLVEDPENLKWFIQAELVNGRW 101

Query: 346 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 525
           AMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 526 YPGSVNADPFNPKLTLPP 579
            PGSVN DP     +LPP
Sbjct: 162 NPGSVNQDPIFKNYSLPP 179