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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960877
Clone id TST39A01NGRL0008_J14
Library
Length 657
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGCAACACTTGTGCCACTTACTTCCATTGCAGCTTTTGGGGCCGCGCCATAGCTGCCTGG
AGACCTCTTTCTTCTCCAATATAAAGCCTCCCCCAACAGCAAGTTGTGTCAGAGTCGTTT
AAAGGCCTCTGTCAGAGGACCCGAGTTCGATACAGAAGTTTTCGTGCCGGAACGAAGAGC
CTCAACTGTGGAAAACACGCAGTGAAGTTGCGAAAGGGCTCCGCTAATTCTGATTAATTT
GATATACTTCCCCTGAGAATTTCCATCGTGGAGAGCCTGATTTTCCTTGCCGCTCTCCTC
ATCACTCACCCCAAAGCGCGACCTGTCTTTAATGTAGCCATGCCTTCAGACTTGCGCACA
TATTGCAGGACTGCACGCCGGCAATACAATTATTGTGCCATTGCCCACTTTTAGAGATTT
ATCTCTTTACCAACTGTGTATCAATTTTACTTAGGGGGCACATTCCCATTATGGCGCAAG
CATCCTTTGTACTATCCAGGACGGCAGCAGCTGTCTCCTCATTGGGTGAAGTGATTGCAT
CTAGGTGTCTCCAGGGATGCTCTTCTATGCGGCATAGTTTGGGTTCGAGTGTGGAAACTT
TCGGCTTGTCCAGCTCTGCTAATACCTCGTATCCTAGTGACCGACCATATCATCCAT
■■Homology search results ■■ -
sp_hit_id Q8DQ60
Definition sp|Q8DQ60|PROA_STRR6 Gamma-glutamyl phosphate reductase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Align length 40
Score (bit) 33.1
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960877|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J14, 5'
         (657 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8DQ60|PROA_STRR6 Gamma-glutamyl phosphate reductase OS=Strep...    33   1.3  
sp|Q97R94|PROA_STRPN Gamma-glutamyl phosphate reductase OS=Strep...    33   1.3  
sp|Q04KZ2|PROA_STRP2 Gamma-glutamyl phosphate reductase OS=Strep...    33   1.3  
sp|A6RG85|NM111_AJECN Pro-apoptotic serine protease NMA111 OS=Aj...    31   6.6  

>sp|Q8DQ60|PROA_STRR6 Gamma-glutamyl phosphate reductase
           OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
           GN=proA PE=3 SV=1
          Length = 420

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -3

Query: 598 VSTLEPKLCRIEEHPWRHLDAITSPNEETAAAVLDSTKDA 479
           VS+LE  +  IE H   H DAI + N E AA   D    A
Sbjct: 326 VSSLEEAVAHIESHSTHHSDAIVTENAEAAAYFTDQVDSA 365


>sp|Q97R94|PROA_STRPN Gamma-glutamyl phosphate reductase
           OS=Streptococcus pneumoniae GN=proA PE=3 SV=1
          Length = 420

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -3

Query: 598 VSTLEPKLCRIEEHPWRHLDAITSPNEETAAAVLDSTKDA 479
           VS+LE  +  IE H   H DAI + N E AA   D    A
Sbjct: 326 VSSLEEAVAHIESHSTHHSDAIVTENAEAAAYFTDQVDSA 365


>sp|Q04KZ2|PROA_STRP2 Gamma-glutamyl phosphate reductase
           OS=Streptococcus pneumoniae serotype 2 (strain D39 /
           NCTC 7466) GN=proA PE=3 SV=1
          Length = 420

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -3

Query: 598 VSTLEPKLCRIEEHPWRHLDAITSPNEETAAAVLDSTKDA 479
           VS+LE  +  IE H   H DAI + N E AA   D    A
Sbjct: 326 VSSLEEAVAHIESHSTHHSDAIVTENAEAAAYFTDQVDSA 365


>sp|A6RG85|NM111_AJECN Pro-apoptotic serine protease NMA111
           OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=NMA111
           PE=3 SV=2
          Length = 1028

 Score = 30.8 bits (68), Expect = 6.6
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +1

Query: 238 FDILPLRISIVESLIFLAALLITHPKARPVFNVAMPSDLRTYCRTARRQYNY 393
           FD+  + +++ +S+I +A ++  HP          PS ++   +TAR   NY
Sbjct: 594 FDLCDINVTVADSIIVMAKVIFLHPLQNYTIIQYDPSLVQAPVKTARLSTNY 645
tr_hit_id Q228Z0
Definition tr|Q228Z0|Q228Z0_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 40
Score (bit) 38.1
E-value 0.48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960877|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J14, 5'
         (657 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q228Z0|Q228Z0_TETTH Putative uncharacterized protein OS=Tetra...    38   0.48 
tr|Q5P2F3|Q5P2F3_AZOSE Probable cytidylyltransferase OS=Azoarcus...    34   9.0  

>tr|Q228Z0|Q228Z0_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_01466260 PE=4
            SV=1
          Length = 2847

 Score = 38.1 bits (87), Expect = 0.48
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 279  DFPCRSPHHSPQSATCL*CSHAFRLAHILQDCTPAIQLLC 398
            DFPC++   SPQ   CL C + ++L ++L+ CTP   + C
Sbjct: 1935 DFPCQTCQISPQE--CLSCFNNYKLENVLKQCTPICDISC 1972


>tr|Q5P2F3|Q5P2F3_AZOSE Probable cytidylyltransferase OS=Azoarcus
           sp. (strain EbN1) GN=AZOSEA23860 PE=4 SV=1
          Length = 187

 Score = 33.9 bits (76), Expect = 9.0
 Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
 Frame = +3

Query: 279 DFPCRSPHHSPQSATCL*CSHAFRLAHILQDCTPAIQLLCHCPLLEIYLFTN-CVSILLR 455
           D PC S   S +  T       FR A   + C P         L    +FTN C  IL R
Sbjct: 7   DLPCASTLESRRPQTATRKMRYFRPAFETKICPPEELASRAAALPRPLVFTNGCFDILHR 66

Query: 456 GHIPIMAQ------ASFVLSRTAAAVSSLGE 530
           GH+  +AQ      A  V   T A+V  LG+
Sbjct: 67  GHVTYLAQARALGAAMIVALNTDASVRRLGK 97