DK960878 |
Clone id |
TST39A01NGRL0008_J15 |
Library |
TST39 |
Length |
652 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J15. 5' end sequence. |
Accession |
DK960878 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AATGATAGAGCTTGCTGATGAGAATGGCTATGGCGACACTGCAGCTGCCTGCCCTCCGCC TTCATCGCTCTTTACAAGAGACTTGCATTGTAAATGCACGCCATCCATCCGCCCATAACA GGTCGTTCTTGGCAGATGAAGGGCGATCTTTGGTTTTGGAACGGACAAGGCGTAGCTTAT TTCTCAGCAGTGCCACTTTGGCCGGTTCTCTACTTCTGAATTACAACAACCATGCCTTGG CAGGTGTCAAGATTTCTCTTTCCAACATGCAAGCCAAAGAATTCCCTTGCCCAGAAGGAC AAACTACTGTCACTGGCGGCACTTCTTTCGGAGCCACCTGTTTTCAAGTAACAGGAGAGG CATTCAATCCATCAAATCAGCCTGTTTACAATGCAGACATTTTTGGTAGGGTGTATGATG CTCAAGGAGAACCCGCTTTAGATGCTGCAGAGAACTTGAGGATTGACACGATTGCAGAAA TCCCTCCTGGCAAAAGCAAGGTAAGCTTTCAGATCACAGTGAATGCAGCCCAAGCAAAGC TTGGACCATTGGAATTGAAGAATTTCAAGGCCACTGGGTTTTTAGGCAAGGTGAACAACA AGCAAGGCACCGGTCGCTTGGATGACATTGACTTCTCTGAGCTGGATGGGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P27696 |
Definition |
sp|P27696|ILVB_KLEPN Acetolactate synthase, catabolic OS=Klebsiella pneumoniae |
Align length |
99 |
Score (bit) |
34.7 |
E-value |
0.44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TDU4 |
Definition |
tr|A9TDU4|A9TDU4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
208 |
Score (bit) |
231.0 |
E-value |
2.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960878|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_J15, 5' (652 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TDU4|A9TDU4_PHYPA Predicted protein OS=Physcomitrella paten... 231 2e-59 tr|B7KE29|B7KE29_9CHRO Putative uncharacterized protein OS=Cyano... 110 6e-23 tr|B4B2Y3|B4B2Y3_9CHRO Putative uncharacterized protein OS=Cyano... 102 2e-20 tr|Q4C1U2|Q4C1U2_CROWT Putative uncharacterized protein OS=Croco... 96 2e-18 tr|A3IUQ0|A3IUQ0_9CHRO Putative uncharacterized protein OS=Cyano... 95 3e-18 tr|Q8YVB8|Q8YVB8_ANASP Alr2060 protein OS=Anabaena sp. (strain P... 94 5e-18 tr|A8YH32|A8YH32_MICAE Genome sequencing data, contig C312 OS=Mi... 94 5e-18 tr|B0JQ92|B0JQ92_MICAN Putative uncharacterized protein OS=Micro... 94 7e-18 tr|B1WZ59|B1WZ59_CYAA5 Putative uncharacterized protein OS=Cyano... 94 9e-18 tr|Q3M8H0|Q3M8H0_ANAVT Putative uncharacterized protein OS=Anaba... 93 2e-17 tr|B4W5H7|B4W5H7_9CYAN Putative uncharacterized protein OS=Micro... 92 3e-17 tr|P74185|P74185_SYNY3 Slr1273 protein OS=Synechocystis sp. (str... 91 6e-17 tr|B1XN33|B1XN33_SYNP2 Putative uncharacterized protein OS=Synec... 90 1e-16 tr|Q8DKU8|Q8DKU8_THEEB Tlr0757 protein OS=Thermosynechococcus el... 89 2e-16 tr|A0ZIB1|A0ZIB1_NODSP Putative uncharacterized protein OS=Nodul... 88 4e-16 tr|B4BUX0|B4BUX0_9CHRO Putative uncharacterized protein OS=Cyano... 88 5e-16 tr|B7JZL3|B7JZL3_SYNP8 Putative uncharacterized protein OS=Synec... 87 7e-16 tr|B2J8W6|B2J8W6_NOSP7 Putative uncharacterized protein OS=Nosto... 87 1e-15 tr|Q5N5X1|Q5N5X1_SYNP6 Putative uncharacterized protein OS=Synec... 86 2e-15 tr|Q31N88|Q31N88_SYNE7 Putative uncharacterized protein OS=Synec... 86 2e-15 tr|B8HW68|B8HW68_9CHRO Putative uncharacterized protein OS=Cyano... 85 4e-15 tr|Q113A6|Q113A6_TRIEI Putative uncharacterized protein OS=Trich... 82 2e-14 tr|B4WNK6|B4WNK6_9SYNE Putative uncharacterized protein OS=Synec... 80 1e-13 tr|A0YW14|A0YW14_9CYAN Putative uncharacterized protein OS=Lyngb... 77 7e-13 tr|B0C7X3|B0C7X3_ACAM1 Putative uncharacterized protein OS=Acary... 76 2e-12 tr|B5VUY9|B5VUY9_SPIMA Putative uncharacterized protein OS=Arthr... 73 1e-11 tr|Q2JU74|Q2JU74_SYNJA Putative uncharacterized protein OS=Synec... 71 5e-11 tr|Q2JPA1|Q2JPA1_SYNJB Putative uncharacterized protein OS=Synec... 71 5e-11 tr|A5GTU1|A5GTU1_SYNR3 Uncharacterized conserved secreted protei... 70 1e-10 tr|Q7U6P2|Q7U6P2_SYNPX Putative uncharacterized protein OS=Synec... 70 1e-10
>tr|A9TDU4|A9TDU4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169486 PE=4 SV=1 Length = 222
Score = 231 bits (590), Expect = 2e-59 Identities = 120/208 (57%), Positives = 146/208 (70%) Frame = +3
Query: 24 MAMATLQLPALRLHRSLQETCIVNARHPSAHNRSFLADEGRSLVLERTRRXXXXXXXXXX 203 M++A L A R ++ Q+ + A P +S + + TRR Sbjct: 10 MSVAVLPCVAARFQKTRQKFVVHAAGGPVNLPQSVIRSSDAEVENVLTRRVFVWSGAGAA 69
Query: 204 XXXXXNYNNHALAGVKISLSNMQAKEFPCPEGQTTVTGGTSFGATCFQVTGEAFNPSNQP 383 NN ALA VK++LSN++A PCP GQTTVTGGTSF CF+VTG+ NP+ Q Sbjct: 70 AGFALGMNNAALADVKLTLSNIEAAPVPCPSGQTTVTGGTSFSVRCFKVTGDVKNPTKQS 129
Query: 384 VYNADIFGRVYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKN 563 VYNADIFGRVYDAQGEPALDA ENLRIDT+AE+PPG SKVSFQI+V+ +QAKLGPL+LKN Sbjct: 130 VYNADIFGRVYDAQGEPALDAEENLRIDTLAEVPPGISKVSFQISVSESQAKLGPLQLKN 189
Query: 564 FKATGFLGKVNNKQGTGRLDDIDFSELD 647 FKATG+LGKVNN+QG+GR+DDIDFSELD Sbjct: 190 FKATGYLGKVNNRQGSGRIDDIDFSELD 217
>tr|B7KE29|B7KE29_9CHRO Putative uncharacterized protein OS=Cyanothece sp. PCC 7424 GN=PCC7424_3328 PE=3 SV=1 Length = 145
Score = 110 bits (276), Expect = 6e-23 Identities = 60/121 (49%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Frame = +3
Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGR 410 A A V+I LSN+ K+ P + +VT GG S A+C+ +TG+A NPS +PVY+AD+FGR Sbjct: 25 AFASVQIKLSNISYKDCPPELAEGSVTSGGNSLPASCYLITGKAKNPSGKPVYDADVFGR 84
Query: 411 VYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGK 590 +YDA GEP L R+ +IAE+PPG S +I+V A Q PL+L+ FKATGF G Sbjct: 85 IYDANGEPVLQ--NRTRVGSIAEVPPGVSNFEVRISVPANQPT--PLQLEQFKATGFTGS 140
Query: 591 V 593 V Sbjct: 141 V 141
>tr|B4B2Y3|B4B2Y3_9CHRO Putative uncharacterized protein OS=Cyanothece sp. PCC 7822 GN=Cyan7822DRAFT_3184 PE=3 SV=1 Length = 147
Score = 102 bits (254), Expect = 2e-20 Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Frame = +3
Query: 246 VKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGRVYDA 422 V+I LSN+ K+ P + VT GG S A+C+ +TG+A NPS + V++AD+FGR+YDA Sbjct: 30 VQIKLSNVSYKDCPPELAKGNVTSGGNSLPASCYLITGKAKNPSGKSVFDADVFGRIYDA 89
Query: 423 QGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKVN 596 GEP L R+ +IAE+PPG S +I+V A Q PL+L+ FKATGF G+V+ Sbjct: 90 NGEPVLQ--NRSRVGSIAEVPPGVSDFEVRISVPANQPT--PLKLEQFKATGFAGRVS 143
>tr|Q4C1U2|Q4C1U2_CROWT Putative uncharacterized protein OS=Crocosphaera watsonii GN=CwatDRAFT_2484 PE=3 SV=1 Length = 149
Score = 95.5 bits (236), Expect = 2e-18 Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Frame = +3
Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGR 410 ALA I L ++ K+ P + VT GG+S A C+ +TG+A N S + VY+AD+FGR Sbjct: 29 ALAVTNIKLLDLSYKDCPPELAEGNVTSGGSSLAAACYLITGKAKNTSGKTVYDADVFGR 88
Query: 411 VYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGK 590 + DA EP L R+ +IAE+PPG S +ITV A Q PL+LKNFKA+GF K Sbjct: 89 ILDANNEPTLQ--NRNRVGSIAEVPPGVSDFEVRITVPANQPT--PLKLKNFKASGFTTK 144
Query: 591 V 593 V Sbjct: 145 V 145
>tr|A3IUQ0|A3IUQ0_9CHRO Putative uncharacterized protein OS=Cyanothece sp. CCY 0110 GN=CY0110_25446 PE=4 SV=1 Length = 149
Score = 95.1 bits (235), Expect = 3e-18 Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 1/125 (0%) Frame = +3
Query: 222 YNNHALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNAD 398 ++ ALA I L N+ K+ P + VT GG+S A C+ +TG+A N S + VY+AD Sbjct: 25 WSQPALALTNIDLFNISYKDCPPELAEGNVTSGGSSLPADCYIITGKAKNTSGKTVYDAD 84
Query: 399 IFGRVYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATG 578 +FGR+ DA EPAL R+ +IAE+PPG S +ITV A Q PL+LK FKA+G Sbjct: 85 VFGRILDANNEPALQ--NRSRVGSIAEVPPGVSDFEVRITVPANQPT--PLKLKKFKASG 140
Query: 579 FLGKV 593 F KV Sbjct: 141 FTTKV 145
>tr|Q8YVB8|Q8YVB8_ANASP Alr2060 protein OS=Anabaena sp. (strain PCC 7120) GN=alr2060 PE=4 SV=1 Length = 167
Score = 94.4 bits (233), Expect = 5e-18 Identities = 54/120 (45%), Positives = 74/120 (61%) Frame = +3
Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVTGGTSFGATCFQVTGEAFNPSNQPVYNADIFGRV 413 A+A +I LS++ +E P Q TV +S A CF VTG+A N + + VY+ADI+GR+ Sbjct: 50 AIALTQIKLSDLSYQECPAELAQGTVATNSSTSANCFIVTGKAENGTYKTVYDADIYGRI 109
Query: 414 YDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKV 593 YDA +P L R+ +IAE+PPG S +ITV A Q PL+LK FKA+GF +V Sbjct: 110 YDANNDPILQ--NRTRLGSIAEVPPGTSDFELRITVPANQPL--PLKLKQFKASGFSAQV 165
>tr|A8YH32|A8YH32_MICAE Genome sequencing data, contig C312 OS=Microcystis aeruginosa PCC 7806 GN=IPF_4318 PE=4 SV=1 Length = 146
Score = 94.4 bits (233), Expect = 5e-18 Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 1/122 (0%) Frame = +3
Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGR 410 A A I L ++ K+ P + +VT GGTSF A CF +TG+A N S + VY+AD+FGR Sbjct: 26 AQALTPIQLLDVSYKDCPPELAEGSVTSGGTSFPANCFLITGKAKNNSGKTVYDADVFGR 85
Query: 411 VYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGK 590 +YDA GEPAL R+ I E+PPG S +I+V+ Q PL L+ FKA+GF Sbjct: 86 IYDANGEPALQ--NRSRVGAIPEVPPGISDFEIRISVSTNQPT--PLRLEKFKASGFTSS 141
Query: 591 VN 596 V+ Sbjct: 142 VD 143
>tr|B0JQ92|B0JQ92_MICAN Putative uncharacterized protein OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_07290 PE=4 SV=1 Length = 118
Score = 94.0 bits (232), Expect = 7e-18 Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%) Frame = +3
Query: 252 ISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGRVYDAQG 428 I L ++ K+ P + +VT GGTSF A CF +TG+A N S + VY+AD+FGR+YDA G Sbjct: 4 IQLLDVSYKDCPPELAEGSVTSGGTSFPANCFLITGKAKNNSGKTVYDADVFGRIYDANG 63
Query: 429 EPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKVN 596 EPAL R+ I E+PPG S +I+V+ Q PL L+ FKA+GF V+ Sbjct: 64 EPALQ--NRSRVGAIPEVPPGISDFEIRISVSTNQPT--PLRLEKFKASGFTSSVD 115
>tr|B1WZ59|B1WZ59_CYAA5 Putative uncharacterized protein OS=Cyanothece (strain ATCC 51142) GN=cce_0073 PE=4 SV=1 Length = 149
Score = 93.6 bits (231), Expect = 9e-18 Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 1/126 (0%) Frame = +3
Query: 222 YNNHALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNAD 398 ++ ALA I L ++ K+ P + VT GG+S A C+ +TG+A N S + VY+AD Sbjct: 25 WSQPALALTNIDLFDISYKDCPPELAEGNVTSGGSSLPADCYIITGKAKNTSGKTVYDAD 84
Query: 399 IFGRVYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATG 578 +FGR+ DA EPAL R+ +IAE+PPG S +ITV A Q PL+LK FKA+G Sbjct: 85 VFGRILDANNEPALQ--NRSRVGSIAEVPPGVSDFEVRITVPANQPT--PLKLKKFKASG 140
Query: 579 FLGKVN 596 F KV+ Sbjct: 141 FTTKVS 146
>tr|Q3M8H0|Q3M8H0_ANAVT Putative uncharacterized protein OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_3108 PE=4 SV=1 Length = 167
Score = 92.8 bits (229), Expect = 2e-17 Identities = 53/120 (44%), Positives = 73/120 (60%) Frame = +3
Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVTGGTSFGATCFQVTGEAFNPSNQPVYNADIFGRV 413 A+A +I LS++ +E P Q TV +S A CF VTG+A N + + VY+ADI+GR+ Sbjct: 50 AMALTQIKLSDLSYQECPAELAQGTVASNSSTSANCFIVTGKAENGTYKTVYDADIYGRI 109
Query: 414 YDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKV 593 YDA +P L R+ +I E+PPG S +ITV A Q PL+LK FKA+GF +V Sbjct: 110 YDANNDPILQ--NRTRLGSITEVPPGISDFELRITVPANQPL--PLKLKQFKASGFSAQV 165
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