DK960878
Clone id TST39A01NGRL0008_J15
Library
Length 652
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
AATGATAGAGCTTGCTGATGAGAATGGCTATGGCGACACTGCAGCTGCCTGCCCTCCGCC
TTCATCGCTCTTTACAAGAGACTTGCATTGTAAATGCACGCCATCCATCCGCCCATAACA
GGTCGTTCTTGGCAGATGAAGGGCGATCTTTGGTTTTGGAACGGACAAGGCGTAGCTTAT
TTCTCAGCAGTGCCACTTTGGCCGGTTCTCTACTTCTGAATTACAACAACCATGCCTTGG
CAGGTGTCAAGATTTCTCTTTCCAACATGCAAGCCAAAGAATTCCCTTGCCCAGAAGGAC
AAACTACTGTCACTGGCGGCACTTCTTTCGGAGCCACCTGTTTTCAAGTAACAGGAGAGG
CATTCAATCCATCAAATCAGCCTGTTTACAATGCAGACATTTTTGGTAGGGTGTATGATG
CTCAAGGAGAACCCGCTTTAGATGCTGCAGAGAACTTGAGGATTGACACGATTGCAGAAA
TCCCTCCTGGCAAAAGCAAGGTAAGCTTTCAGATCACAGTGAATGCAGCCCAAGCAAAGC
TTGGACCATTGGAATTGAAGAATTTCAAGGCCACTGGGTTTTTAGGCAAGGTGAACAACA
AGCAAGGCACCGGTCGCTTGGATGACATTGACTTCTCTGAGCTGGATGGGCC
■■Homology search results ■■ -
sp_hit_id P27696
Definition sp|P27696|ILVB_KLEPN Acetolactate synthase, catabolic OS=Klebsiella pneumoniae
Align length 99
Score (bit) 34.7
E-value 0.44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960878|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J15, 5'
(652 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27696|ILVB_KLEPN Acetolactate synthase, catabolic OS=Klebsie... 35 0.44
sp|Q27312|NADA_APLKU ADP-ribosyl cyclase OS=Aplysia kurodai PE=1... 32 2.9
sp|Q5KP25|RSE1_CRYNE Pre-mRNA-splicing factor RSE1 OS=Cryptococc... 31 6.4
sp|P29241|NADA_APLCA ADP-ribosyl cyclase OS=Aplysia californica ... 31 6.5
sp|Q8YW62|COAE_ANASP Dephospho-CoA kinase OS=Anabaena sp. (strai... 30 8.4

>sp|P27696|ILVB_KLEPN Acetolactate synthase, catabolic OS=Klebsiella
pneumoniae GN=budB PE=1 SV=1
Length = 559

Score = 34.7 bits (78), Expect = 0.44
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +3

Query: 354 GEAFNPSNQPVYNADIFGRVYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQ 533
G AF Q V + + G+V A G P + AA + ID +A++ F + + A+Q
Sbjct: 161 GSAFVSLPQDVVDGPVSGKVLPASGAPQMGAAPDDAIDQVAKLIAQAKNPIFLLGLMASQ 220

Query: 534 AKLGPLELKNFKATGFLGKVNNKQGTGRLDDIDFSELDG 650
+ L+ T + + Q G ++ +FS G
Sbjct: 221 PE-NSKALRRLLETSHIPVTSTYQAAGAVNQDNFSRFAG 258


>sp|Q27312|NADA_APLKU ADP-ribosyl cyclase OS=Aplysia kurodai PE=1
SV=1
Length = 282

Score = 32.0 bits (71), Expect = 2.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2

Query: 206 FSTSELQQPCLGRCQDFSFQHASQRIPLPRRTNYCHWRHFFRSHLFSS 349
F T ELQ LGRC+D+ +P + W +FF++ F +
Sbjct: 26 FPTPELQNVFLGRCKDYEITRYLTILPRVKSDCRALWTNFFKAFSFKA 73


>sp|Q5KP25|RSE1_CRYNE Pre-mRNA-splicing factor RSE1 OS=Cryptococcus
neoformans GN=RSE1 PE=3 SV=1
Length = 1217

Score = 30.8 bits (68), Expect = 6.4
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +3

Query: 279 EFPCPEGQTTVTGGTSFGATCFQVTGEAFNPSNQPVYNADIFGRVYDAQGEPALDAAENL 458
E+P P GQT V T+ A + + + D G + + Q + AL N
Sbjct: 554 EWPAPPGQTIVAATTNRRQVVI-----ALSTAELVYFELDPEGSLSEYQEKKALPG--NA 606

Query: 459 RIDTIAEIPPGKSKVSF 509
TIAE+P G+ + SF
Sbjct: 607 TCVTIAEVPEGRRRTSF 623


>sp|P29241|NADA_APLCA ADP-ribosyl cyclase OS=Aplysia californica
PE=1 SV=1
Length = 282

Score = 30.8 bits (68), Expect = 6.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2

Query: 212 TSELQQPCLGRCQDFSFQHASQRIPLPRRTNYCHWRHFFRSHLFSS 349
T EL+ LGRC+D+ +P R W+ FF++ F +
Sbjct: 28 TRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKN 73


>sp|Q8YW62|COAE_ANASP Dephospho-CoA kinase OS=Anabaena sp. (strain
PCC 7120) GN=coaE PE=3 SV=1
Length = 196

Score = 30.4 bits (67), Expect = 8.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3

Query: 309 VTGGTSFGATCFQVTGEAFNPSNQPVYNADIFGRVYDAQGEPALDA 446
+TGG + G T V + N P+++ADI+ R + G P LDA
Sbjct: 8 LTGGIATGKTT--VANYLASAHNLPIFDADIYARDAVSLGSPILDA 51


tr_hit_id A9TDU4
Definition tr|A9TDU4|A9TDU4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 208
Score (bit) 231.0
E-value 2.0e-59
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960878|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J15, 5'
(652 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TDU4|A9TDU4_PHYPA Predicted protein OS=Physcomitrella paten... 231 2e-59
tr|B7KE29|B7KE29_9CHRO Putative uncharacterized protein OS=Cyano... 110 6e-23
tr|B4B2Y3|B4B2Y3_9CHRO Putative uncharacterized protein OS=Cyano... 102 2e-20
tr|Q4C1U2|Q4C1U2_CROWT Putative uncharacterized protein OS=Croco... 96 2e-18
tr|A3IUQ0|A3IUQ0_9CHRO Putative uncharacterized protein OS=Cyano... 95 3e-18
tr|Q8YVB8|Q8YVB8_ANASP Alr2060 protein OS=Anabaena sp. (strain P... 94 5e-18
tr|A8YH32|A8YH32_MICAE Genome sequencing data, contig C312 OS=Mi... 94 5e-18
tr|B0JQ92|B0JQ92_MICAN Putative uncharacterized protein OS=Micro... 94 7e-18
tr|B1WZ59|B1WZ59_CYAA5 Putative uncharacterized protein OS=Cyano... 94 9e-18
tr|Q3M8H0|Q3M8H0_ANAVT Putative uncharacterized protein OS=Anaba... 93 2e-17
tr|B4W5H7|B4W5H7_9CYAN Putative uncharacterized protein OS=Micro... 92 3e-17
tr|P74185|P74185_SYNY3 Slr1273 protein OS=Synechocystis sp. (str... 91 6e-17
tr|B1XN33|B1XN33_SYNP2 Putative uncharacterized protein OS=Synec... 90 1e-16
tr|Q8DKU8|Q8DKU8_THEEB Tlr0757 protein OS=Thermosynechococcus el... 89 2e-16
tr|A0ZIB1|A0ZIB1_NODSP Putative uncharacterized protein OS=Nodul... 88 4e-16
tr|B4BUX0|B4BUX0_9CHRO Putative uncharacterized protein OS=Cyano... 88 5e-16
tr|B7JZL3|B7JZL3_SYNP8 Putative uncharacterized protein OS=Synec... 87 7e-16
tr|B2J8W6|B2J8W6_NOSP7 Putative uncharacterized protein OS=Nosto... 87 1e-15
tr|Q5N5X1|Q5N5X1_SYNP6 Putative uncharacterized protein OS=Synec... 86 2e-15
tr|Q31N88|Q31N88_SYNE7 Putative uncharacterized protein OS=Synec... 86 2e-15
tr|B8HW68|B8HW68_9CHRO Putative uncharacterized protein OS=Cyano... 85 4e-15
tr|Q113A6|Q113A6_TRIEI Putative uncharacterized protein OS=Trich... 82 2e-14
tr|B4WNK6|B4WNK6_9SYNE Putative uncharacterized protein OS=Synec... 80 1e-13
tr|A0YW14|A0YW14_9CYAN Putative uncharacterized protein OS=Lyngb... 77 7e-13
tr|B0C7X3|B0C7X3_ACAM1 Putative uncharacterized protein OS=Acary... 76 2e-12
tr|B5VUY9|B5VUY9_SPIMA Putative uncharacterized protein OS=Arthr... 73 1e-11
tr|Q2JU74|Q2JU74_SYNJA Putative uncharacterized protein OS=Synec... 71 5e-11
tr|Q2JPA1|Q2JPA1_SYNJB Putative uncharacterized protein OS=Synec... 71 5e-11
tr|A5GTU1|A5GTU1_SYNR3 Uncharacterized conserved secreted protei... 70 1e-10
tr|Q7U6P2|Q7U6P2_SYNPX Putative uncharacterized protein OS=Synec... 70 1e-10

>tr|A9TDU4|A9TDU4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_169486 PE=4 SV=1
Length = 222

Score = 231 bits (590), Expect = 2e-59
Identities = 120/208 (57%), Positives = 146/208 (70%)
Frame = +3

Query: 24 MAMATLQLPALRLHRSLQETCIVNARHPSAHNRSFLADEGRSLVLERTRRXXXXXXXXXX 203
M++A L A R ++ Q+ + A P +S + + TRR
Sbjct: 10 MSVAVLPCVAARFQKTRQKFVVHAAGGPVNLPQSVIRSSDAEVENVLTRRVFVWSGAGAA 69

Query: 204 XXXXXNYNNHALAGVKISLSNMQAKEFPCPEGQTTVTGGTSFGATCFQVTGEAFNPSNQP 383
NN ALA VK++LSN++A PCP GQTTVTGGTSF CF+VTG+ NP+ Q
Sbjct: 70 AGFALGMNNAALADVKLTLSNIEAAPVPCPSGQTTVTGGTSFSVRCFKVTGDVKNPTKQS 129

Query: 384 VYNADIFGRVYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKN 563
VYNADIFGRVYDAQGEPALDA ENLRIDT+AE+PPG SKVSFQI+V+ +QAKLGPL+LKN
Sbjct: 130 VYNADIFGRVYDAQGEPALDAEENLRIDTLAEVPPGISKVSFQISVSESQAKLGPLQLKN 189

Query: 564 FKATGFLGKVNNKQGTGRLDDIDFSELD 647
FKATG+LGKVNN+QG+GR+DDIDFSELD
Sbjct: 190 FKATGYLGKVNNRQGSGRIDDIDFSELD 217


>tr|B7KE29|B7KE29_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. PCC 7424 GN=PCC7424_3328 PE=3 SV=1
Length = 145

Score = 110 bits (276), Expect = 6e-23
Identities = 60/121 (49%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Frame = +3

Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGR 410
A A V+I LSN+ K+ P + +VT GG S A+C+ +TG+A NPS +PVY+AD+FGR
Sbjct: 25 AFASVQIKLSNISYKDCPPELAEGSVTSGGNSLPASCYLITGKAKNPSGKPVYDADVFGR 84

Query: 411 VYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGK 590
+YDA GEP L R+ +IAE+PPG S +I+V A Q PL+L+ FKATGF G
Sbjct: 85 IYDANGEPVLQ--NRTRVGSIAEVPPGVSNFEVRISVPANQPT--PLQLEQFKATGFTGS 140

Query: 591 V 593
V
Sbjct: 141 V 141


>tr|B4B2Y3|B4B2Y3_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. PCC 7822 GN=Cyan7822DRAFT_3184 PE=3
SV=1
Length = 147

Score = 102 bits (254), Expect = 2e-20
Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Frame = +3

Query: 246 VKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGRVYDA 422
V+I LSN+ K+ P + VT GG S A+C+ +TG+A NPS + V++AD+FGR+YDA
Sbjct: 30 VQIKLSNVSYKDCPPELAKGNVTSGGNSLPASCYLITGKAKNPSGKSVFDADVFGRIYDA 89

Query: 423 QGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKVN 596
GEP L R+ +IAE+PPG S +I+V A Q PL+L+ FKATGF G+V+
Sbjct: 90 NGEPVLQ--NRSRVGSIAEVPPGVSDFEVRISVPANQPT--PLKLEQFKATGFAGRVS 143


>tr|Q4C1U2|Q4C1U2_CROWT Putative uncharacterized protein
OS=Crocosphaera watsonii GN=CwatDRAFT_2484 PE=3 SV=1
Length = 149

Score = 95.5 bits (236), Expect = 2e-18
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +3

Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGR 410
ALA I L ++ K+ P + VT GG+S A C+ +TG+A N S + VY+AD+FGR
Sbjct: 29 ALAVTNIKLLDLSYKDCPPELAEGNVTSGGSSLAAACYLITGKAKNTSGKTVYDADVFGR 88

Query: 411 VYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGK 590
+ DA EP L R+ +IAE+PPG S +ITV A Q PL+LKNFKA+GF K
Sbjct: 89 ILDANNEPTLQ--NRNRVGSIAEVPPGVSDFEVRITVPANQPT--PLKLKNFKASGFTTK 144

Query: 591 V 593
V
Sbjct: 145 V 145


>tr|A3IUQ0|A3IUQ0_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. CCY 0110 GN=CY0110_25446 PE=4 SV=1
Length = 149

Score = 95.1 bits (235), Expect = 3e-18
Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Frame = +3

Query: 222 YNNHALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNAD 398
++ ALA I L N+ K+ P + VT GG+S A C+ +TG+A N S + VY+AD
Sbjct: 25 WSQPALALTNIDLFNISYKDCPPELAEGNVTSGGSSLPADCYIITGKAKNTSGKTVYDAD 84

Query: 399 IFGRVYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATG 578
+FGR+ DA EPAL R+ +IAE+PPG S +ITV A Q PL+LK FKA+G
Sbjct: 85 VFGRILDANNEPALQ--NRSRVGSIAEVPPGVSDFEVRITVPANQPT--PLKLKKFKASG 140

Query: 579 FLGKV 593
F KV
Sbjct: 141 FTTKV 145


>tr|Q8YVB8|Q8YVB8_ANASP Alr2060 protein OS=Anabaena sp. (strain PCC
7120) GN=alr2060 PE=4 SV=1
Length = 167

Score = 94.4 bits (233), Expect = 5e-18
Identities = 54/120 (45%), Positives = 74/120 (61%)
Frame = +3

Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVTGGTSFGATCFQVTGEAFNPSNQPVYNADIFGRV 413
A+A +I LS++ +E P Q TV +S A CF VTG+A N + + VY+ADI+GR+
Sbjct: 50 AIALTQIKLSDLSYQECPAELAQGTVATNSSTSANCFIVTGKAENGTYKTVYDADIYGRI 109

Query: 414 YDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKV 593
YDA +P L R+ +IAE+PPG S +ITV A Q PL+LK FKA+GF +V
Sbjct: 110 YDANNDPILQ--NRTRLGSIAEVPPGTSDFELRITVPANQPL--PLKLKQFKASGFSAQV 165


>tr|A8YH32|A8YH32_MICAE Genome sequencing data, contig C312
OS=Microcystis aeruginosa PCC 7806 GN=IPF_4318 PE=4 SV=1
Length = 146

Score = 94.4 bits (233), Expect = 5e-18
Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Frame = +3

Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGR 410
A A I L ++ K+ P + +VT GGTSF A CF +TG+A N S + VY+AD+FGR
Sbjct: 26 AQALTPIQLLDVSYKDCPPELAEGSVTSGGTSFPANCFLITGKAKNNSGKTVYDADVFGR 85

Query: 411 VYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGK 590
+YDA GEPAL R+ I E+PPG S +I+V+ Q PL L+ FKA+GF
Sbjct: 86 IYDANGEPALQ--NRSRVGAIPEVPPGISDFEIRISVSTNQPT--PLRLEKFKASGFTSS 141

Query: 591 VN 596
V+
Sbjct: 142 VD 143


>tr|B0JQ92|B0JQ92_MICAN Putative uncharacterized protein
OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_07290
PE=4 SV=1
Length = 118

Score = 94.0 bits (232), Expect = 7e-18
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +3

Query: 252 ISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNADIFGRVYDAQG 428
I L ++ K+ P + +VT GGTSF A CF +TG+A N S + VY+AD+FGR+YDA G
Sbjct: 4 IQLLDVSYKDCPPELAEGSVTSGGTSFPANCFLITGKAKNNSGKTVYDADVFGRIYDANG 63

Query: 429 EPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKVN 596
EPAL R+ I E+PPG S +I+V+ Q PL L+ FKA+GF V+
Sbjct: 64 EPALQ--NRSRVGAIPEVPPGISDFEIRISVSTNQPT--PLRLEKFKASGFTSSVD 115


>tr|B1WZ59|B1WZ59_CYAA5 Putative uncharacterized protein
OS=Cyanothece (strain ATCC 51142) GN=cce_0073 PE=4 SV=1
Length = 149

Score = 93.6 bits (231), Expect = 9e-18
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +3

Query: 222 YNNHALAGVKISLSNMQAKEFPCPEGQTTVT-GGTSFGATCFQVTGEAFNPSNQPVYNAD 398
++ ALA I L ++ K+ P + VT GG+S A C+ +TG+A N S + VY+AD
Sbjct: 25 WSQPALALTNIDLFDISYKDCPPELAEGNVTSGGSSLPADCYIITGKAKNTSGKTVYDAD 84

Query: 399 IFGRVYDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATG 578
+FGR+ DA EPAL R+ +IAE+PPG S +ITV A Q PL+LK FKA+G
Sbjct: 85 VFGRILDANNEPALQ--NRSRVGSIAEVPPGVSDFEVRITVPANQPT--PLKLKKFKASG 140

Query: 579 FLGKVN 596
F KV+
Sbjct: 141 FTTKVS 146


>tr|Q3M8H0|Q3M8H0_ANAVT Putative uncharacterized protein OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_3108
PE=4 SV=1
Length = 167

Score = 92.8 bits (229), Expect = 2e-17
Identities = 53/120 (44%), Positives = 73/120 (60%)
Frame = +3

Query: 234 ALAGVKISLSNMQAKEFPCPEGQTTVTGGTSFGATCFQVTGEAFNPSNQPVYNADIFGRV 413
A+A +I LS++ +E P Q TV +S A CF VTG+A N + + VY+ADI+GR+
Sbjct: 50 AMALTQIKLSDLSYQECPAELAQGTVASNSSTSANCFIVTGKAENGTYKTVYDADIYGRI 109

Query: 414 YDAQGEPALDAAENLRIDTIAEIPPGKSKVSFQITVNAAQAKLGPLELKNFKATGFLGKV 593
YDA +P L R+ +I E+PPG S +ITV A Q PL+LK FKA+GF +V
Sbjct: 110 YDANNDPILQ--NRTRLGSITEVPPGISDFELRITVPANQPL--PLKLKQFKASGFSAQV 165