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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960881
Clone id TST39A01NGRL0008_J18
Library
Length 634
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAACACATAATCAAGAAAGGTAAGCAGGAAGGAAGCCGCAGTCATGGCAGCAACAACTGC
CTCCCTCTCCTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGAGCTCTCTCG
CAAGGTGGGAGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTCCTCATCTGG
CAGCATCTGGTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGGCTCTCCCCC
ATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGGTCTGTCCGC
AGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAGATGGGCCAT
GTTGGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAAGAACGGTGTCAAGTTTGG
TGAGGCTGTGTGGTTCAAGGCTGGCTCCCAGATCTTCGCCGATGGCGGCCTTGATTATCT
TGGCAACCCGAGCCTTGTCCACGCTCAAAGCATTTTGGCCATTTGGGCCTGCCAGGTCAT
CCTTATGGGCGCTGTTGAGGGGTACCGTGTTGCAGGTGGTCCCCTTGGTGAGGTTGAGGA
CCCCATCTACCCCGGTGGCTCCTTCGACCCCCTC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 198
Score (bit) 380.0
E-value 1.0e-105
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960881|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J18, 5'
         (634 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   380   e-105
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   320   3e-87
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   320   5e-87
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   316   6e-86
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   316   6e-86
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   315   1e-85
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   315   1e-85
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   315   2e-85
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   315   2e-85
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   314   2e-85
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   314   2e-85
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   313   4e-85
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   313   6e-85
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   311   1e-84
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   311   2e-84
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   311   2e-84
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   311   2e-84
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   311   2e-84
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   311   2e-84
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   310   4e-84
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   310   4e-84
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   310   5e-84
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   310   5e-84
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   309   9e-84
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   308   1e-83
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   308   2e-83
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   308   2e-83
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   308   2e-83
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   307   3e-83
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   307   3e-83

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  380 bits (977), Expect = e-105
 Identities = 187/198 (94%), Positives = 194/198 (97%), Gaps = 1/198 (0%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 220
           MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG
Sbjct: 1   MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59

Query: 221 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 400
           PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA
Sbjct: 60  PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119

Query: 401 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 580
           KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179

Query: 581 PLGEVEDPIYPGGSFDPL 634
           PLGEVEDPIYPGGSFDPL
Sbjct: 180 PLGEVEDPIYPGGSFDPL 197


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  320 bits (821), Expect = 3e-87
 Identities = 158/200 (79%), Positives = 174/200 (87%), Gaps = 3/200 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 214
           MAA TA  S+++     +KPVNELSRKV G  EARV M      S+GS  IWYG+DRP +
Sbjct: 1   MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 215 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 394
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 395 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 574
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180

Query: 575 GGPLGEVEDPIYPGGSFDPL 634
           GGPLGEV DPIYPGGSFDPL
Sbjct: 181 GGPLGEVTDPIYPGGSFDPL 200



 Score = 31.2 bits (69), Expect = 4.7
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 227 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 406
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 407 G 409
           G
Sbjct: 240 G 240


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
           OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
          Length = 266

 Score =  320 bits (819), Expect = 5e-87
 Identities = 159/201 (79%), Positives = 169/201 (84%), Gaps = 4/201 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 211
           MAATT SLSSS F+G   K V  L      G+ARV M       K+ SS S WYGSDR L
Sbjct: 1   MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57

Query: 212 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 391
           YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 58  YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 392 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 571
           LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGYR+
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRI 177

Query: 572 AGGPLGEVEDPIYPGGSFDPL 634
           AGGPLGE+ DP+YPGGSFDPL
Sbjct: 178 AGGPLGEIVDPLYPGGSFDPL 198


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  316 bits (810), Expect = 6e-86
 Identities = 155/202 (76%), Positives = 172/202 (85%), Gaps = 5/202 (2%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 208
           MA++T +LSS+ F+G+ +   + L      GEARV M      A   +SSGS WYG DR 
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55

Query: 209 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 388
           LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P
Sbjct: 56  LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115

Query: 389 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 568
           ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR
Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR 175

Query: 569 VAGGPLGEVEDPIYPGGSFDPL 634
           VAGGPLGEV DP+YPGG+FDPL
Sbjct: 176 VAGGPLGEVVDPLYPGGTFDPL 197


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  316 bits (810), Expect = 6e-86
 Identities = 154/194 (79%), Positives = 164/194 (84%), Gaps = 1/194 (0%)
 Frame = +2

Query: 56  TASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSG 232
           T+++  S F+GQ L KP NEL RKVG    RV M    KS+  SIWYG DRP YLGPFS 
Sbjct: 3   TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 233 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGV 412
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 413 KFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 592
           KFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSILAIWACQV+LMGAVEGYRV GGPLGE
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGE 182

Query: 593 VEDPIYPGGSFDPL 634
             D +YPGG+FDPL
Sbjct: 183 GLDQLYPGGAFDPL 196


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  315 bits (808), Expect = 1e-85
 Identities = 154/199 (77%), Positives = 168/199 (84%), Gaps = 2/199 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 217
           MA +T +LSSS F+G+ +K     S   G G   ++  A K   +SSGS WYG DR  YL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 218 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 397
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 398 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 577
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 578 GPLGEVEDPIYPGGSFDPL 634
           GPLGEV DP+YPGGSFDPL
Sbjct: 181 GPLGEVVDPLYPGGSFDPL 199


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  315 bits (807), Expect = 1e-85
 Identities = 154/202 (76%), Positives = 172/202 (85%), Gaps = 5/202 (2%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGA-GEARVQMMA----PKKSSSGSIWYGSDRP 208
           MAA+T ++SS+  +G  +K        VG+ GE R+ M      PK ++SGS WYG DR 
Sbjct: 1   MAASTMAISSTAMAGTPIK--------VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRV 52

Query: 209 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 388
            YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P
Sbjct: 53  KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 112

Query: 389 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 568
           ELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR
Sbjct: 113 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 172

Query: 569 VAGGPLGEVEDPIYPGGSFDPL 634
           +AGGPLGEV DP+YPGGSFDPL
Sbjct: 173 IAGGPLGEVVDPLYPGGSFDPL 194


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  315 bits (806), Expect = 2e-85
 Identities = 155/199 (77%), Positives = 167/199 (83%), Gaps = 2/199 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 217
           MAA T +LSSS F+G+ +K     S   G G+  ++    K    SSGS WYG DR  YL
Sbjct: 1   MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 218 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 397
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 398 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 577
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 578 GPLGEVEDPIYPGGSFDPL 634
           GPLGEV DP+YPGGSFDPL
Sbjct: 181 GPLGEVVDPLYPGGSFDPL 199


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  315 bits (806), Expect = 2e-85
 Identities = 155/199 (77%), Positives = 168/199 (84%), Gaps = 2/199 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 217
           MAA+T +LSS  F+G+ +K     S   G G+  ++  A K    SSGS WYG DR  YL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 218 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 397
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 398 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 577
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 578 GPLGEVEDPIYPGGSFDPL 634
           GPLGEV DP+YPGGSFDPL
Sbjct: 181 GPLGEVVDPLYPGGSFDPL 199


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  314 bits (805), Expect = 2e-85
 Identities = 152/197 (77%), Positives = 164/197 (83%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 223
           MAA T +LSS  F+GQ +K     S   G G   ++    K + S S WYG DR  YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 224 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 403
           FSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 404 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 583
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 584 LGEVEDPIYPGGSFDPL 634
           LGEV DP+YPGGSFDPL
Sbjct: 181 LGEVVDPLYPGGSFDPL 197
tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 197
Score (bit) 340.0
E-value 3.0e-92
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960881|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J18, 5'
         (634 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   340   3e-92
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   334   3e-90
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   333   4e-90
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   331   3e-89
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   330   3e-89
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   330   4e-89
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   329   7e-89
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   329   7e-89
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   327   4e-88
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   327   4e-88
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   326   6e-88
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   325   1e-87
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   323   7e-87
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   323   7e-87
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   321   2e-86
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote...   319   8e-86
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin...   319   1e-85
tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind...   318   1e-85
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   318   2e-85
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   317   3e-85
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   317   4e-85
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ...   317   5e-85
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   317   5e-85
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   316   7e-85
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   316   7e-85
tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ...   316   7e-85
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   316   9e-85
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   316   9e-85
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   316   9e-85
tr|O64450|O64450_NICSY Light harvesting chlorophyll a/b-binding ...   315   1e-84

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  340 bits (873), Expect = 3e-92
 Identities = 174/197 (88%), Positives = 177/197 (89%), Gaps = 7/197 (3%)
 Frame = +2

Query: 44  MAATT-------ASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSD 202
           MAATT       A LSSSVFSGQQLKPVNELSRKVG  EARVQMMAPKKSSSG+I YG+D
Sbjct: 1   MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSSSGNIRYGAD 60

Query: 203 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 382
           R LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 61  RLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 120

Query: 383 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 562
           TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG
Sbjct: 121 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 180

Query: 563 YRVAGGPLGEVEDPIYP 613
           YRVA  PL  +  P  P
Sbjct: 181 YRVAVVPLVRLRTPSTP 197



 Score = 43.1 bits (100), Expect = 0.014
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = +3

Query: 543 LWALLRGTVLQVVPLVRLRTPSTPVAPSTP 632
           L   + G  + VVPLVRLRTPSTPVAPSTP
Sbjct: 174 LMGAVEGYRVAVVPLVRLRTPSTPVAPSTP 203


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  334 bits (856), Expect = 3e-90
 Identities = 163/197 (82%), Positives = 174/197 (88%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 223
           MAA TA  S+++     LKPVNELSRKVG  EARV M   K S S SIWYG+DRP +LGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58

Query: 224 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 403
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 404 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 583
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178

Query: 584 LGEVEDPIYPGGSFDPL 634
           LGEV DPIYPGGSFDPL
Sbjct: 179 LGEVTDPIYPGGSFDPL 195


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  333 bits (855), Expect = 4e-90
 Identities = 160/197 (81%), Positives = 176/197 (89%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 223
           MAA TA  S+++     LKPVNELSRKVG+ EARV M    KS+S SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60

Query: 224 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 403
           FSG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 61  FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120

Query: 404 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 583
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGP
Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGP 180

Query: 584 LGEVEDPIYPGGSFDPL 634
           LGE+ DPIYPGGSFDPL
Sbjct: 181 LGEITDPIYPGGSFDPL 197


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  331 bits (848), Expect = 3e-89
 Identities = 161/199 (80%), Positives = 175/199 (87%), Gaps = 2/199 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 217
           MAA TA  S+++     LKPVNELSRKVG+ +ARV M      S+GS  IWYG+DRP YL
Sbjct: 1   MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 218 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 397
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 398 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 577
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 578 GPLGEVEDPIYPGGSFDPL 634
           GPLGEV DPIYPGGSFDPL
Sbjct: 181 GPLGEVTDPIYPGGSFDPL 199


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  330 bits (847), Expect = 3e-89
 Identities = 160/197 (81%), Positives = 175/197 (88%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 223
           MAA TA  S+++     LKPVNELSR+VGA EARV M   K + S SIWYG+DRP +LGP
Sbjct: 1   MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58

Query: 224 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 403
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118

Query: 404 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 583
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178

Query: 584 LGEVEDPIYPGGSFDPL 634
           LGEV DPIYPGGSFDPL
Sbjct: 179 LGEVTDPIYPGGSFDPL 195


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  330 bits (846), Expect = 4e-89
 Identities = 160/197 (81%), Positives = 172/197 (87%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 223
           MAA TA  S+++     LKPVNELSRKVG  EAR+ M      SS SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60

Query: 224 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 403
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 61  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120

Query: 404 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 583
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 180

Query: 584 LGEVEDPIYPGGSFDPL 634
           LG+V DPIYPGGSFDPL
Sbjct: 181 LGDVTDPIYPGGSFDPL 197


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  329 bits (844), Expect = 7e-89
 Identities = 160/200 (80%), Positives = 177/200 (88%), Gaps = 3/200 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 214
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 215 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 394
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 395 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 574
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 575 GGPLGEVEDPIYPGGSFDPL 634
           GGPLG+V DPIYPGGSFDPL
Sbjct: 181 GGPLGDVTDPIYPGGSFDPL 200


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  329 bits (844), Expect = 7e-89
 Identities = 160/200 (80%), Positives = 177/200 (88%), Gaps = 3/200 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 214
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 215 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 394
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 395 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 574
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 575 GGPLGEVEDPIYPGGSFDPL 634
           GGPLG+V DPIYPGGSFDPL
Sbjct: 181 GGPLGDVTDPIYPGGSFDPL 200


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  327 bits (838), Expect = 4e-88
 Identities = 162/197 (82%), Positives = 174/197 (88%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 223
           MAA TA+ S+++     LK +NELSRKVG  +ARV M   K SSS SIWYG+DRP YLGP
Sbjct: 1   MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58

Query: 224 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 403
            SG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 404 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 583
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 178

Query: 584 LGEVEDPIYPGGSFDPL 634
           LGEV DPIYPGGSFDPL
Sbjct: 179 LGEVTDPIYPGGSFDPL 195


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  327 bits (838), Expect = 4e-88
 Identities = 161/199 (80%), Positives = 175/199 (87%), Gaps = 2/199 (1%)
 Frame = +2

Query: 44  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 217
           MAA TA  S+++     LKPVNELSRKVG  EARV M   A K ++S SIWYG+DRP YL
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 218 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 397
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 398 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 577
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAG 180

Query: 578 GPLGEVEDPIYPGGSFDPL 634
           GPLG+V DPIYPGGSFDPL
Sbjct: 181 GPLGDVTDPIYPGGSFDPL 199