DK960882 |
Clone id |
TST39A01NGRL0008_J19 |
Library |
TST39 |
Length |
391 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J19. 5' end sequence. |
Accession |
DK960882 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL201Contig1 |
Sequence |
GTTTGATCCCAACGCCGTCGCAACAGCAGCTATCTTAGAAAGCTCATCCCCCACTATTAA TGGAAAAGAGTACTACAATATCTCGGTTCTAACCAGAACAGCTGATGGTGATGAGGGAGG CAAGCATCAACTCATTGTGGGCACCGTCTCTGGTGGAAAGCTATATTTGCTCAAGGCTCA AGCCGGCGACAAGAGATGGTTTAAGGGTGCAAAGAAGTTTGTTGAGGGTGCTGCAAATTC CTTCAGCGTAGCTTAAAACTGCTTGTAACAAAGCTGGCTATCTTGTAATTGTCCAAATGC TATAACCTGTGCTTATGTTGTTTATACATTGTGGTGGAGTAACAGTGCATCCTAAAAAAA AAAAAAAAAAAATATTTTTTTTTTCCCTCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SLQ8 |
Definition |
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus |
Align length |
84 |
Score (bit) |
137.0 |
E-value |
2.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960882|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_J19, 5' (353 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chlorop... 137 2e-32 sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloropla... 137 2e-32 sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein ... 136 4e-32 sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chlo... 135 6e-32 sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chlorop... 133 2e-31 sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chlo... 133 2e-31 sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chlorop... 131 9e-31 sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chlorop... 131 1e-30 sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chlorop... 130 2e-30 sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chlorop... 130 2e-30 sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chlorop... 129 4e-30 sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chlorop... 126 4e-29 sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chlorop... 125 5e-29 sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chlo... 122 5e-28 sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chlo... 121 9e-28 sp|P11471|PSBP_CHLRE Oxygen-evolving enhancer protein 2, chlorop... 93 4e-19 sp|Q99IE5|POLN_RUBVV Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|O40955|POLN_RUBVR Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|Q99IE7|POLN_RUBVO Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|Q8BCR0|POLN_RUBVN Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|Q86500|POLN_RUBVM Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|Q9J6K9|POLN_RUBVD Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|Q6X2U2|POLN_RUBVC Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|Q6X2U4|POLN_RUBVB Non-structural polyprotein p200 OS=Rubella ... 31 1.7 sp|P13889|POLN_RUBVT Non-structural polyprotein p200 OS=Rubella ... 31 2.2 sp|Q07LU3|HMUV_RHOP5 Hemin import ATP-binding protein hmuV OS=Rh... 31 2.2 sp|Q88I82|DNAE2_PSEPK Error-prone DNA polymerase OS=Pseudomonas ... 30 2.8 sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette tran... 30 2.8 sp|Q9LXX5|PPD6_ARATH PsbP domain-containing protein 6, chloropla... 30 3.7 sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette tran... 30 3.7
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1 Length = 263
Score = 137 bits (345), Expect = 2e-32 Identities = 65/84 (77%), Positives = 76/84 (90%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 FDP+AVATA ILE+++ +NGK+YY +SVLTRTADGDEGGKHQLI TV+ GKLY+ KAQ Sbjct: 180 FDPDAVATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKLYICKAQ 239
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGA+KFVEGAA+SFSVA Sbjct: 240 AGDKRWFKGARKFVEGAASSFSVA 263
>sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1 Length = 259
Score = 137 bits (344), Expect = 2e-32 Identities = 67/84 (79%), Positives = 72/84 (85%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 FD NAVA A ILESS+P I GK+YYNISVLTRTADGDEGGKHQLI TV GKLY+ KAQ Sbjct: 176 FDTNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQ 235
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGA+KFVE A+SFSVA Sbjct: 236 AGDKRWFKGARKFVEDTASSFSVA 259
>sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis thaliana GN=PSBP2 PE=5 SV=3 Length = 125
Score = 136 bits (342), Expect = 4e-32 Identities = 67/84 (79%), Positives = 73/84 (86%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 FD NAVATA ILE+S+ I GKEYY +SVLTRTADGDEGGKHQLI TV+GGKLY+ KAQ Sbjct: 42 FDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ 101
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGA+KFVE AA SFSVA Sbjct: 102 AGDKRWFKGARKFVENAATSFSVA 125
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2 Length = 263
Score = 135 bits (340), Expect = 6e-32 Identities = 67/84 (79%), Positives = 72/84 (85%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 FD NAVATA ILESSS + GK YY +SVLTRTADGDEGGKHQLI TV+GGKLY+ KAQ Sbjct: 180 FDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQ 239
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGA+KFVE AA SFSVA Sbjct: 240 AGDKRWFKGARKFVESAATSFSVA 263
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1 Length = 265
Score = 133 bits (335), Expect = 2e-31 Identities = 64/84 (76%), Positives = 72/84 (85%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 F+PNAV TA ILE+S+P + GK+YY+I VLTRTADGDEGGKH LI TVS GKLY+ KAQ Sbjct: 182 FEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKLYICKAQ 241
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGAKKFVE AA+SFS A Sbjct: 242 AGDKRWFKGAKKFVESAASSFSAA 265
>sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2 Length = 268
Score = 133 bits (335), Expect = 2e-31 Identities = 65/84 (77%), Positives = 73/84 (86%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 F+ AVATA +LE+SS T+ GKEYY +SVLTRTADGDEGGKHQLI TV+GGKLY+ KAQ Sbjct: 185 FESGAVATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKLYICKAQ 244
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGA+KFVE AA SFSVA Sbjct: 245 AGDKRWFKGARKFVENAATSFSVA 268
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1 Length = 260
Score = 131 bits (330), Expect = 9e-31 Identities = 63/84 (75%), Positives = 72/84 (85%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 F+ AVATA +LE+SS T+ GK+YY +SVLTRTADGDEGGKHQLI TV+ GKLY+ KAQ Sbjct: 177 FESGAVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQ 236
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGAKKFVE AA SFS+A Sbjct: 237 AGDKRWFKGAKKFVENAATSFSIA 260
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1 Length = 264
Score = 131 bits (329), Expect = 1e-30 Identities = 62/84 (73%), Positives = 71/84 (84%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 FDP++VATA ILE S+P + GK+YYNISVLTRTADGDEGGKH +I TV+ GKLY+ KAQ Sbjct: 181 FDPDSVATANILEVSTPVVGGKQYYNISVLTRTADGDEGGKHHVISATVTDGKLYICKAQ 240
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGAKKFVE SF+VA Sbjct: 241 AGDKRWFKGAKKFVESTTTSFNVA 264
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1 Length = 258
Score = 130 bits (328), Expect = 2e-30 Identities = 63/84 (75%), Positives = 71/84 (84%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 F+ AVAT +LE+SS T+ GKEYY +SVLTRTADGDEGGKHQLI TV+ GKLY+ KAQ Sbjct: 175 FESGAVATRNLLEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQ 234
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGAKKFVE AA SFS+A Sbjct: 235 AGDKRWFKGAKKFVENAATSFSIA 258
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1 Length = 267
Score = 130 bits (327), Expect = 2e-30 Identities = 61/84 (72%), Positives = 72/84 (85%) Frame = +2
Query: 2 FDPNAVATAAILESSSPTINGKEYYNISVLTRTADGDEGGKHQLIVGTVSGGKLYLLKAQ 181 FD VA+A +LESS+P ++GK+YY+I+VLTRTADGDEGGKHQ+I TV GKLY+ KAQ Sbjct: 184 FDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQ 243
Query: 182 AGDKRWFKGAKKFVEGAANSFSVA 253 AGDKRWFKGAKKFVE A +SFSVA Sbjct: 244 AGDKRWFKGAKKFVESATSSFSVA 267
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LMQ7 |
Definition |
tr|B8LMQ7|B8LMQ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
84 |
Score (bit) |
136.0 |
E-value |
6.0e-31 |
Report |
|