DK960883
Clone id TST39A01NGRL0008_J20
Library
Length 642
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGTCCACCTTAGCATGCAGTTAGCTCTGTACCTCCATGTATATAGTTTGAAAGTGTTTGT
TTACTGGTATTTTTTTCCGTTATTTTGAAGGGTGAAAATGTGATCTACTCTTCGAAAAAA
ACACTAAATTTTCCTGCATGACTTTAAATCCTTGGAATTTGTTGGGCCCTTAAAATATCA
ACTCTGGTCATTGTCTCCTAAAGGCTCTTCTCCTCCCAATTGTCACGATTTGCAGGTACA
GATTTTTCAACGGTTTCTGCCTTGTGTGTTGAGAGATCCCATGAGGTGGGAGCTTCCATA
TTACAGAAGTGCAACAGGCTCCTTTTAAGAATGATAGTCTTTTGTCCACACAAAAAATAC
AGATTTTGGGATCTACGCTAACGAGAAACAGATGGTTGGTACTGCTTGCTTCCAGTTACG
GTTCCGAGATACAAGTCAGTGTTTGACAACGGTATTCCTTTCAAAGTCTCATTACAGCAG
TCCCCATCCTTATTTTATTCAGGTCATTGGCAAGCCCCATGTGGCGTCCCCCGTCTTGTG
TCAGAGCCGGAGCCGGAGCTTCCAAGCATCTATCAATGCAGAAGTATGTGATAATGTGCA
TCTCTCGGGCTCTTGCAAGCGATCAGTTTGCCACACTAGCTC
■■Homology search results ■■ -
sp_hit_id A8F8I3
Definition sp|A8F8I3|PURL_THELT Phosphoribosylformylglycinamidine synthase 2 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)
Align length 74
Score (bit) 30.8
E-value 6.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960883|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J20, 5'
(642 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8F8I3|PURL_THELT Phosphoribosylformylglycinamidine synthase ... 31 6.2

>sp|A8F8I3|PURL_THELT Phosphoribosylformylglycinamidine synthase 2
OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385
/ TMO) GN=purL PE=3 SV=1
Length = 724

Score = 30.8 bits (68), Expect = 6.2
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = -3

Query: 307 SVIWKLPPHGISQHTRQKPLKNLYLQIVTIGRRRAFRRQ*PELIF*GPNKFQGFKVMQEN 128
SV+W S+H K K+L + T G R + GP + G + +N
Sbjct: 34 SVMW-------SEHCSYKHTKHLLRDLPTSGER----------VIQGPGENAGVVDIGDN 76

Query: 127 LVFFSKSRSHFHPS 86
LV K SH HPS
Sbjct: 77 LVIVFKMESHNHPS 90


tr_hit_id B6N2W2
Definition tr|B6N2W2|B6N2W2_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 79
Score (bit) 34.7
E-value 5.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960883|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_J20, 5'
(642 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6N2W2|B6N2W2_BRAFL Putative uncharacterized protein OS=Branc... 35 5.1
tr|Q6L3J2|Q6L3J2_SOLDE Major Facilitator Superfamily protein OS=... 34 6.6
tr|Q6L3J1|Q6L3J1_SOLDE POT family protein OS=Solanum demissum GN... 34 8.7

>tr|B6N2W2|B6N2W2_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_89974 PE=4 SV=1
Length = 1425

Score = 34.7 bits (78), Expect = 5.1
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = -3

Query: 568 CLEAPAPALTQDGGRHMGLANDLNKIRMGTAVMRL*KEYRCQTLTCISEP*LEASSTNHL 389
C++ PAPAL + H G D + GT + E R + C P +E + H
Sbjct: 662 CVDNPAPALDANCTCHAGYIGD--GLASGTGCL----EIRPCSFACCPRPRIELTLPEHQ 715

Query: 388 FLVSVDPKICIFCVDKRLS 332
V VD ++ IF D L+
Sbjct: 716 NYVEVDFRVYIFAFDNTLN 734


>tr|Q6L3J2|Q6L3J2_SOLDE Major Facilitator Superfamily protein
OS=Solanum demissum GN=SDM1_28t00021 PE=4 SV=2
Length = 531

Score = 34.3 bits (77), Expect = 6.6
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +3

Query: 402 LLASSYGSEIQVSV*QRYSFQSLITAVPILILFRSLASPMWRPPSCVRAGAGASKHLSMQ 581
+LA SY V F SLI+A+ IL+L + A + RPP C G+ S
Sbjct: 50 ILADSYLGSFSV-----IWFSSLISALGILLLLLTSAIDVLRPPPC-DDGSSLCTSPSTH 103

Query: 582 KYVIMCISRALAS 620
+Y ++ ++ ALAS
Sbjct: 104 QYAVLYVALALAS 116


>tr|Q6L3J1|Q6L3J1_SOLDE POT family protein OS=Solanum demissum
GN=SDM1_28t00020 PE=4 SV=2
Length = 531

Score = 33.9 bits (76), Expect = 8.7
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +3

Query: 402 LLASSYGSEIQVSV*QRYSFQSLITAVPILILFRSLASPMWRPPSCVRAGAGASKHLSMQ 581
+LA SY V F SLI+A+ IL+L + A + RPP C G+ S
Sbjct: 50 ILADSYLGSFSV-----IWFSSLISALGILLLLFTSAIDVLRPPPC-DDGSSLCTSPSTH 103

Query: 582 KYVIMCISRALAS 620
+Y ++ ++ ALAS
Sbjct: 104 QYAVLYVALALAS 116