DK960886 |
Clone id |
TST39A01NGRL0008_J23 |
Library |
TST39 |
Length |
696 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_J23. 5' end sequence. |
Accession |
DK960886 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGTTTGTACGATCCGACTGTGTCATCGGTGTGAGAATGGTAAGTTGGAATGGTAGGTCGT AACAATTGAGAGTTGAAACCCACGCGAAGCAGCAAGCATGGCGACAAAATAAATTGCACA TCGATCTTGAGTACCTGCAGAGTGTTGAAGTTTTCTATTGCAGGCTATCAGATCTGTGTA TCACTCGCGACCCTTTTGCTTTGAGTGTGTGAGGAGGGTGCTTGATCCCATTGGATCGCA AAAGCTTGACACCATTAGGGCTTCATTTTTGAAGCCCTGATCGAACATCAGTTTCTTTAT CAGAAGTTTTGTGTACAACACCTGGGGATTGTGAAGTAGATTGCTGCTTGTCTCCTTCAC AGTTGGCTGAGCTCGGTAATCTATCCTTTCCTGCGATATAGGACAGTGATATGGAGTCTA GCAGGAATGCTGTCGAAGCTTACAAGAGAACTCGGCTTGTGGACCTTGTGATAACAGATG ACGACAAGGTGGCTCCTATCTATCGTCTCGATGAGATTTGTGAGATGCTGCGCACTTCTT CCAGTGACATGGTTCGGGAAGTAGTAGAGTACACCATGAAACGCCTCAATAGCAGGAGTG CTCGGGTCAAACAGAAGACTCTTAGAATGATCAAATATGCGGTAGTGAAAGGTGGACCGG GAGTCAAACGCCAAATGCAGCGCCAAGCAGCAGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C5H4 |
Definition |
sp|Q9C5H4|Y3627_ARATH VHS domain-containing protein At3g16270 OS=Arabidopsis thaliana |
Align length |
95 |
Score (bit) |
107.0 |
E-value |
5.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6U0U2 |
Definition |
tr|B6U0U2|B6U0U2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
95 |
Score (bit) |
115.0 |
E-value |
2.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960886|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_J23, 5' (696 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6U0U2|B6U0U2_MAIZE Putative uncharacterized protein OS=Zea m... 115 2e-24 tr|Q5NB64|Q5NB64_ORYSJ cDNA clone:J033079D23, full insert sequen... 115 3e-24 tr|B8AB14|B8AB14_ORYSI Putative uncharacterized protein OS=Oryza... 115 3e-24 tr|A2ZR04|A2ZR04_ORYSJ Putative uncharacterized protein OS=Oryza... 115 3e-24 tr|A7P771|A7P771_VITVI Chromosome chr9 scaffold_7, whole genome ... 105 3e-21 tr|A5BML7|A5BML7_VITVI Putative uncharacterized protein OS=Vitis... 105 3e-21 tr|A9U523|A9U523_PHYPA Predicted protein (Fragment) OS=Physcomit... 102 3e-20 tr|B6N5E2|B6N5E2_BRAFL Putative uncharacterized protein OS=Branc... 45 0.006 tr|B6L137|B6L137_BRAFL Putative uncharacterized protein OS=Branc... 45 0.006 tr|A8JJ30|A8JJ30_CHLRE Predicted protein (Fragment) OS=Chlamydom... 42 0.049 tr|A9DCJ4|A9DCJ4_9GAMM Sugar fermentation stimulation protein OS... 36 0.16 tr|A4RTI2|A4RTI2_OSTLU Predicted protein OS=Ostreococcus lucimar... 37 1.2 tr|A3Y936|A3Y936_9GAMM Putative regulator for maltose metabolism... 35 3.5 tr|A9V702|A9V702_MONBE Predicted protein OS=Monosiga brevicollis... 35 3.5 tr|A7IWI6|A7IWI6_PBCVN Putative uncharacterized protein b311L OS... 35 4.6 tr|B5JZV1|B5JZV1_9RHOB Transposase OS=Octadecabacter antarcticus... 35 4.6 tr|B5JZD6|B5JZD6_9RHOB Transposase OS=Octadecabacter antarcticus... 35 4.6 tr|Q4DW47|Q4DW47_TRYCR Putative uncharacterized protein OS=Trypa... 35 4.6 tr|Q54WR0|Q54WR0_DICDI Putative uncharacterized protein OS=Dicty... 35 6.0 tr|B0T958|B0T958_CAUSK Alcohol dehydrogenase GroES domain protei... 34 7.8 tr|B8CTC1|B8CTC1_9GAMM Sugar fermentation stimulation protein OS... 34 7.8 tr|A0XYR0|A0XYR0_9GAMM Transcriptional regulator of maltose meta... 34 7.8
>tr|B6U0U2|B6U0U2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 688
Score = 115 bits (289), Expect = 2e-24 Identities = 54/95 (56%), Positives = 76/95 (80%) Frame = +3
Query: 411 MESSRNAVEAYKRTRLVDLVITDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLN 590 M+ SR AVE+Y R+R+VD V DDDKVAP+Y+L+EICE+LR S + +V+EV ++ +KRL+ Sbjct: 1 MDQSRRAVESYWRSRMVDGVTADDDKVAPVYKLEEICELLRASDASIVKEVADFVLKRLD 60
Query: 591 SRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQAAA 695 ++S+ VKQK LR+IKYA+ K G KR+MQR +AA Sbjct: 61 NKSSLVKQKALRLIKYAIGKSGTDFKREMQRHSAA 95
>tr|Q5NB64|Q5NB64_ORYSJ cDNA clone:J033079D23, full insert sequence OS=Oryza sativa subsp. japonica GN=P0431F01.34 PE=2 SV=1 Length = 693
Score = 115 bits (287), Expect = 3e-24 Identities = 55/95 (57%), Positives = 75/95 (78%) Frame = +3
Query: 411 MESSRNAVEAYKRTRLVDLVITDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLN 590 M+ SR AVE+Y R+R+VD V DDDKVAP+Y+L+EICE+LR S + +V+EV ++ +KRL+ Sbjct: 1 MDQSRRAVESYWRSRMVDGVTADDDKVAPVYKLEEICELLRASDASVVKEVADFVLKRLD 60
Query: 591 SRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQAAA 695 ++S VKQK LR+IKYAV K G KR+MQR +AA Sbjct: 61 NKSPVVKQKALRLIKYAVGKSGTDFKREMQRHSAA 95
>tr|B8AB14|B8AB14_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01028 PE=4 SV=1 Length = 693
Score = 115 bits (287), Expect = 3e-24 Identities = 55/95 (57%), Positives = 75/95 (78%) Frame = +3
Query: 411 MESSRNAVEAYKRTRLVDLVITDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLN 590 M+ SR AVE+Y R+R+VD V DDDKVAP+Y+L+EICE+LR S + +V+EV ++ +KRL+ Sbjct: 1 MDQSRRAVESYWRSRMVDGVTADDDKVAPVYKLEEICELLRASDASVVKEVADFVLKRLD 60
Query: 591 SRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQAAA 695 ++S VKQK LR+IKYAV K G KR+MQR +AA Sbjct: 61 NKSPVVKQKALRLIKYAVGKSGTDFKREMQRHSAA 95
>tr|A2ZR04|A2ZR04_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000976 PE=3 SV=1 Length = 1164
Score = 115 bits (287), Expect = 3e-24 Identities = 55/95 (57%), Positives = 75/95 (78%) Frame = +3
Query: 411 MESSRNAVEAYKRTRLVDLVITDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLN 590 M+ SR AVE+Y R+R+VD V DDDKVAP+Y+L+EICE+LR S + +V+EV ++ +KRL+ Sbjct: 1 MDQSRRAVESYWRSRMVDGVTADDDKVAPVYKLEEICELLRASDASVVKEVADFVLKRLD 60
Query: 591 SRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQAAA 695 ++S VKQK LR+IKYAV K G KR+MQR +AA Sbjct: 61 NKSPVVKQKALRLIKYAVGKSGTDFKREMQRHSAA 95
>tr|A7P771|A7P771_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034347001 PE=4 SV=1 Length = 709
Score = 105 bits (262), Expect = 3e-21 Identities = 50/95 (52%), Positives = 73/95 (76%) Frame = +3
Query: 411 MESSRNAVEAYKRTRLVDLVITDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLN 590 M+SSR AVE+Y R+R++D +D+DKV P+Y+L+EICE+LR+S +V+EV E+ +KRL+ Sbjct: 1 MDSSRRAVESYWRSRMIDGATSDEDKVTPVYKLEEICELLRSSHVSIVKEVSEFILKRLD 60
Query: 591 SRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQAAA 695 +S V+QK LR+IKYAV K G +R+MQR + A Sbjct: 61 HKSPVVRQKALRLIKYAVGKSGVEFRREMQRHSVA 95
>tr|A5BML7|A5BML7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011432 PE=4 SV=1 Length = 1694
Score = 105 bits (262), Expect = 3e-21 Identities = 50/95 (52%), Positives = 73/95 (76%) Frame = +3
Query: 411 MESSRNAVEAYKRTRLVDLVITDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLN 590 M+SSR AVE+Y R+R++D +D+DKV P+Y+L+EICE+LR+S +V+EV E+ +KRL+ Sbjct: 986 MDSSRRAVESYWRSRMIDGATSDEDKVTPVYKLEEICELLRSSHVSIVKEVSEFILKRLD 1045
Query: 591 SRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQAAA 695 +S V+QK LR+IKYAV K G +R+MQR + A Sbjct: 1046 HKSPVVRQKALRLIKYAVGKSGVEFRREMQRHSVA 1080
>tr|A9U523|A9U523_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228352 PE=4 SV=1 Length = 146
Score = 102 bits (253), Expect = 3e-20 Identities = 50/95 (52%), Positives = 71/95 (74%) Frame = +3
Query: 411 MESSRNAVEAYKRTRLVDLVITDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLN 590 M+S AVEAY+R L+D +D+D VAP+Y+L+EIC ++RTSS D+VRE+VE +KR++ Sbjct: 1 MQSGVRAVEAYRRAVLIDGATSDNDSVAPVYKLEEICTLMRTSSLDIVRELVERILKRMD 60
Query: 591 SRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQAAA 695 +S VKQK LR+IK+A K G +R++QRQA A Sbjct: 61 HKSPIVKQKALRLIKFAAGKAGVEFRREIQRQAPA 95
>tr|B6N5E2|B6N5E2_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_126066 PE=4 SV=1 Length = 570
Score = 44.7 bits (104), Expect = 0.006 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3
Query: 474 TDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLNSRSARVKQKTLRMIKYAVVKG 653 +DD+ P Y EI ML SSS ++V++Y + RL S VK K LR++K+ + G Sbjct: 29 SDDESPTPGYLYQEINAMLHESSS-QCQQVLDYLVDRLKKDSFHVKIKVLRVMKHLIENG 87
Query: 654 GPGVKRQMQRQA 689 P ++ ++R++ Sbjct: 88 PPEFQQGLRRRS 99
>tr|B6L137|B6L137_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_64933 PE=4 SV=1 Length = 511
Score = 44.7 bits (104), Expect = 0.006 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3
Query: 474 TDDDKVAPIYRLDEICEMLRTSSSDMVREVVEYTMKRLNSRSARVKQKTLRMIKYAVVKG 653 +DD+ P Y EI ML SSS ++V++Y + RL S VK K LR++K+ + G Sbjct: 29 SDDESPTPGYLYQEINAMLHESSS-QCQQVLDYLVDRLKKDSFHVKIKVLRVMKHLIENG 87
Query: 654 GPGVKRQMQRQA 689 P ++ ++R++ Sbjct: 88 PPEFQQGLRRRS 99
>tr|A8JJ30|A8JJ30_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_96488 PE=4 SV=1 Length = 179
Score = 41.6 bits (96), Expect = 0.049 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = +3
Query: 507 LDEICEMLRTSSSDMVREVVEYTMKRLNSRSARVKQKTLRMIKYAVVKGGPGVKRQMQRQ 686 +DE+ EM + S++ ++ + KRL ++S VK K LR+I++ V KG +R MQR Sbjct: 1 MDELAEMAK-GSAESSEKIADRIAKRLQNKSPVVKYKALRLIRHIVNKGCGQFQRTMQRH 59
Query: 687 A 689 A Sbjct: 60 A 60
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