DK960889
Clone id TST39A01NGRL0008_K02
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_K02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTGTTAATAGGGGGGACTCTCTCTCTCTTCCTCTCTCGAGAGATCAGCTATGGATTAAAA
TTTAGTGACCACAACATGAGAGAAGGATCGAAGCAGGGCATTAGAGAAAGTCCAGGATAA
CCCAAAATACTAAGCTACTTCATAAATCTTACTGTTAACCTTACTTTTAGGTCAGCTCTT
GCAAGAGACAGGCTGCCTTTGACAAATAAGTTTAACCTTGCTAAAGTTGCTGCTAATCAC
TACCCAAATTTTGTGATTCTCAGTGAGAGTGCACTCCTACAGCTAGACAGAAATTTTCAA
AGTAATGTGAGCAAGTATGATATATGGATGCCCCAATGGATGGGCGGGCGGAATCCCGGT
CTGCGTCCTCTCCGGCTCTGCCCAGCAGGACAACACCTATGTTTGTGCATCAACTAGAGC
TGCTGGTAAAGATGGAACTTTACTGAAACAGAGAGACTACCTCATCCTCGGGCTGACGGG
CGCAACACCAGAACATATGCTTACGAGTTCCATCCCTTCTGGTGTTGATCAAATGGAGTG
TGA
■■Homology search results ■■ -
sp_hit_id Q00993
Definition sp|Q00993|UFO_MOUSE Tyrosine-protein kinase receptor UFO OS=Mus musculus
Align length 54
Score (bit) 30.0
E-value 7.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960889|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_K02, 5'
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q00993|UFO_MOUSE Tyrosine-protein kinase receptor UFO OS=Mus ... 30 7.6
sp|Q8DGV8|RECR_THEEB Recombination protein recR OS=Thermosynecho... 30 9.9

>sp|Q00993|UFO_MOUSE Tyrosine-protein kinase receptor UFO OS=Mus
musculus GN=Axl PE=1 SV=1
Length = 888

Score = 30.0 bits (66), Expect = 7.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1

Query: 244 PNFVILSESALLQLDRNFQSNVSKYDIWMPQWMGGRNPGLRPLRLCPAGQHLCL 405
P V L + +L+L N Q+ V + W +W + L+L AG++ C+
Sbjct: 59 PEVVWLRDGQILELADNTQTQVPLGEDWQDEWKVVSQLRISALQLSDAGEYQCM 112


>sp|Q8DGV8|RECR_THEEB Recombination protein recR
OS=Thermosynechococcus elongatus (strain BP-1) GN=recR
PE=3 SV=1
Length = 202

Score = 29.6 bits (65), Expect = 9.9
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Frame = +2

Query: 356 PVCVLSGSAQQDNTYVCASTRAAGKDGTLL-KQRDY---------LILGLTGATPEHM 499
PVC + S Q+DN +C A +D + K R+Y LI L G TPEH+
Sbjct: 69 PVCEICASPQRDNHTICVV--ADSRDVIAIEKTREYHGKYHVLGGLISPLEGITPEHL 124


tr_hit_id Q8WW39
Definition tr|Q8WW39|Q8WW39_HUMAN SLC38A10 protein (Fragment) OS=Homo sapiens
Align length 57
Score (bit) 34.3
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960889|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_K02, 5'
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8WW39|Q8WW39_HUMAN SLC38A10 protein (Fragment) OS=Homo sapie... 34 4.4
tr|Q7RJ17|Q7RJ17_PLAYO Streptococcus pyogenes AMV253, putative O... 33 7.6

>tr|Q8WW39|Q8WW39_HUMAN SLC38A10 protein (Fragment) OS=Homo sapiens
GN=SLC38A10 PE=2 SV=1
Length = 112

Score = 34.3 bits (77), Expect = 4.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +2

Query: 296 FKVM*ASMIYGC-------PNGWAGGIPVCVLSGSAQQDNTYVCASTRAAGKDGTLL 445
FK + S+++G PNG AGG+P C G +T C TR A + +L+
Sbjct: 55 FKALTLSVVFGTMVGGILIPNGKAGGLPCCRGVGPGASASTKTCTVTRPAQRPSSLV 111


>tr|Q7RJ17|Q7RJ17_PLAYO Streptococcus pyogenes AMV253, putative
OS=Plasmodium yoelii yoelii GN=PY03449 PE=4 SV=1
Length = 482

Score = 33.5 bits (75), Expect = 7.6
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1

Query: 199 LTNKFNLAKVAANHYPNFVILSESALLQLDRNFQSNVSKYDIW 327
LT K+ N++ N VIL +S LL L +N Q++++KY W
Sbjct: 421 LTKYSKNKKIFQNYFDNNVILIKSLLLLLQQNNQNDINKYYPW 463