DK960895 |
Clone id |
TST39A01NGRL0008_K08 |
Library |
TST39 |
Length |
606 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_K08. 5' end sequence. |
Accession |
DK960895 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CCAGAGAGAATGGCGAGCTTACACTTGCAGTTGCAGACTATATTTGCTTCTCGTCGAGCG TCTTCATCCCGAAATGGCGCTCGCACATCTTCGTCGTTCACCAACAGCTGTTTGCGGCTC AAGGCTGGCATTCCTCCAAAGTTGTCTTCCTCCTTTGTGCCGCGAGCATCAACAGAAGGC TTACCTGCAGAACTTTTGGAGGATGCCAAATTTGTTCCTATTAATGATGATGATCCTCAG TATGGACCTCCAGCACTTATGTTGATGGGATTCTCTCACTCAGAAGCTGTGAAGGTGCAA GCGCTTCTGAAAAACATGCAGGGTGACTTCCTCAAGGTCCTAATCTGCACAGATGACATG ATAAAAGGAACACTTTGGAATGCAATGCACGTTTCACAACCAGAACTGGAAGACATGAAG GCTTCTAAAGATGTGCCACGCATTTGCTTCCTTTCGGGCTTAACAGGAGAGGAGTTAATG ATGTTTGTGAGGGCCTTTCCAGATGCAAAATTGGAACCAACAGCGTTTGCAGCGATGGTG CCTAATAATGCACAGAAGACTATAGAGGAGCTCATGGAGGAGATAATGGGAGATCACGAG CGTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O42939 |
Definition |
sp|O42939|UBA2_SCHPO Ubiquitin-activating enzyme E1-like OS=Schizosaccharomyces pombe |
Align length |
40 |
Score (bit) |
32.7 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNH1 |
Definition |
tr|B8LNH1|B8LNH1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
148 |
Score (bit) |
208.0 |
E-value |
2.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960895|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_K08, 5' (606 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNH1|B8LNH1_PICSI Putative uncharacterized protein OS=Picea... 208 2e-52 tr|A9NQI9|A9NQI9_PICSI Putative uncharacterized protein OS=Picea... 199 8e-50 tr|B4FRD2|B4FRD2_MAIZE Putative uncharacterized protein OS=Zea m... 192 1e-47 tr|A7PHZ6|A7PHZ6_VITVI Chromosome chr13 scaffold_17, whole genom... 189 1e-46 tr|Q9AV40|Q9AV40_ORYSJ Putative uncharacterized protein OSJNBa00... 187 5e-46 tr|Q336V6|Q336V6_ORYSJ Os10g0545100 protein OS=Oryza sativa subs... 187 5e-46 tr|B8BI34|B8BI34_ORYSI Putative uncharacterized protein OS=Oryza... 187 5e-46 tr|A3BV81|A3BV81_ORYSJ Putative uncharacterized protein OS=Oryza... 187 5e-46 tr|Q8H188|Q8H188_ARATH Putative uncharacterized protein (Fragmen... 182 2e-44 tr|Q56XK4|Q56XK4_ARATH Putative uncharacterized protein At3g1040... 182 2e-44 tr|A0JQ78|A0JQ78_ARATH At3g10405 OS=Arabidopsis thaliana PE=2 SV=1 182 2e-44 tr|A9TPJ4|A9TPJ4_PHYPA Predicted protein OS=Physcomitrella paten... 177 6e-43 tr|A4S017|A4S017_OSTLU Predicted protein OS=Ostreococcus lucimar... 86 2e-15 tr|A8I1J7|A8I1J7_CHLRE Transmembrane protein OS=Chlamydomonas re... 79 2e-13 tr|Q015I8|Q015I8_OSTTA Chromosome 07 contig 1, DNA sequence OS=O... 78 5e-13 tr|B8FFC5|B8FFC5_9DELT Putative uncharacterized protein OS=Desul... 46 0.002 tr|A9A0J7|A9A0J7_DESOH Putative uncharacterized protein OS=Desul... 42 0.028 tr|Q758A8|Q758A8_ASHGO AEL156Wp OS=Ashbya gossypii GN=AEL156W PE... 35 3.4 tr|A6BGS3|A6BGS3_9FIRM Putative uncharacterized protein OS=Dorea... 35 3.4 tr|A5BKQ9|A5BKQ9_VITVI Putative uncharacterized protein OS=Vitis... 35 3.4 tr|B5YA36|B5YA36_COPPD Putative uncharacterized protein OS=Copro... 34 5.8 tr|Q4PBA1|Q4PBA1_USTMA Putative uncharacterized protein OS=Ustil... 34 5.8 tr|Q0VQ27|Q0VQ27_ALCBS PurB protein OS=Alcanivorax borkumensis (... 34 7.5 tr|Q2M049|Q2M049_DROPS GA11214 OS=Drosophila pseudoobscura pseud... 33 9.8 tr|B4GS43|B4GS43_DROPE GL24811 OS=Drosophila persimilis GN=GL248... 33 9.8
>tr|B8LNH1|B8LNH1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 222
Score = 208 bits (529), Expect = 2e-52 Identities = 96/148 (64%), Positives = 124/148 (83%) Frame = +1
Query: 163 RASTEGLPAELLEDAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVL 342 +A++EGLP EL+ED KFVP+N+DDP++GPPAL+L+GF H E KVQALLK M G+FLKVL Sbjct: 66 QAASEGLPTELVEDPKFVPLNEDDPRFGPPALLLLGFKHEEVSKVQALLKEMDGEFLKVL 125
Query: 343 ICTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPT 522 + T DM+K TLW+AMHV Q +L+ +K + +PRICFLSGL+GEE MMF+ AFP+ LE T Sbjct: 126 LYTSDMVKLTLWDAMHVEQEDLKKVKVADGLPRICFLSGLSGEETMMFIDAFPEVGLEST 185
Query: 523 AFAAMVPNNAQKTIEELMEEIMGDHERL 606 FAA+VPN+A K++EEL++EIMGDHERL Sbjct: 186 VFAALVPNSAGKSLEELIDEIMGDHERL 213
>tr|A9NQI9|A9NQI9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 220
Score = 199 bits (507), Expect = 8e-50 Identities = 94/148 (63%), Positives = 122/148 (82%) Frame = +1
Query: 163 RASTEGLPAELLEDAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVL 342 +A++EGLP EL+ED KFVP+N+DDP++GPPAL+L+GF H E K ALLK M G+FLKVL Sbjct: 66 QAASEGLPTELVEDPKFVPLNEDDPRFGPPALLLLGFKHEEVSK--ALLKEMDGEFLKVL 123
Query: 343 ICTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPT 522 + T DM+K TLW+AMHV Q +L+ +K + +PRICFLSGL+GEE MMF+ AFP+ LE T Sbjct: 124 LYTSDMVKLTLWDAMHVEQEDLKKVKVADGLPRICFLSGLSGEETMMFIDAFPEVGLEST 183
Query: 523 AFAAMVPNNAQKTIEELMEEIMGDHERL 606 FAA+VPN+A K++EEL++EIMGDHERL Sbjct: 184 VFAALVPNSAGKSLEELIDEIMGDHERL 211
>tr|B4FRD2|B4FRD2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 209
Score = 192 bits (488), Expect = 1e-47 Identities = 89/145 (61%), Positives = 115/145 (79%), Gaps = 1/145 (0%) Frame = +1
Query: 175 EGLPAELLE-DAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVLICT 351 EG PAEL+E D+KFVP+N DDP YGPPAL+L+GF E V +QA LK ++G+FLKV+ CT Sbjct: 59 EGAPAELMEEDSKFVPLNADDPMYGPPALLLIGFEKGETVTIQAFLKELEGEFLKVIHCT 118
Query: 352 DDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPTAFA 531 ++M K TLW+AMH QP+LE +K + +PRIC SGLTGEE+MMF+ AFP+ LE AFA Sbjct: 119 EEMTKQTLWDAMHTEQPDLEAVKIAGPLPRICIFSGLTGEEMMMFINAFPETGLEAAAFA 178
Query: 532 AMVPNNAQKTIEELMEEIMGDHERL 606 A+VPN+A+K + E++EEIMGDHE L Sbjct: 179 ALVPNSAEKVLGEVIEEIMGDHEML 203
>tr|A7PHZ6|A7PHZ6_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018138001 PE=4 SV=1 Length = 160
Score = 189 bits (480), Expect = 1e-46 Identities = 86/143 (60%), Positives = 113/143 (79%) Frame = +1
Query: 178 GLPAELLEDAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVLICTDD 357 G+P EL+ED+KFVP+N DDP YGPPAL+L+GF E VK++ LLK + G+FL+V+ CT+D Sbjct: 16 GIPTELIEDSKFVPLNSDDPIYGPPALLLLGFEVEEEVKIRQLLKELDGEFLQVIYCTED 75
Query: 358 MIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPTAFAAM 537 MI +LW AM+ Q LE +K +K +PRICFLSGL+GEE+MMF+ AFP+ LE FAA+ Sbjct: 76 MITRSLWEAMNTEQSNLEALKIAKALPRICFLSGLSGEEMMMFIDAFPETGLEAAVFAAL 135
Query: 538 VPNNAQKTIEELMEEIMGDHERL 606 VPN+A K ++EL+EEIMGDHE L Sbjct: 136 VPNSADKPLQELIEEIMGDHEML 158
>tr|Q9AV40|Q9AV40_ORYSJ Putative uncharacterized protein OSJNBa0001O14.2 OS=Oryza sativa subsp. japonica GN=OSJNBa0001O14.2 PE=4 SV=1 Length = 213
Score = 187 bits (474), Expect = 5e-46 Identities = 85/147 (57%), Positives = 113/147 (76%), Gaps = 3/147 (2%) Frame = +1
Query: 175 EGLPAELLE---DAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVLI 345 EG+P EL+E D+KFVP+N +DP YGPPAL+L+GF E KVQ L+ + G+FLKV+ Sbjct: 54 EGVPGELMEEEEDSKFVPLNAEDPMYGPPALLLIGFEEGETNKVQEFLRELDGEFLKVIH 113
Query: 346 CTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPTA 525 CT++M K TLW+AMH QP +E +K +K +PRIC SGLTGEE+MMF+ ++P+ LEP A Sbjct: 114 CTEEMTKQTLWDAMHTEQPSIEAVKIAKSMPRICIFSGLTGEEMMMFINSYPETGLEPAA 173
Query: 526 FAAMVPNNAQKTIEELMEEIMGDHERL 606 FAA+VPN+A K + E++EEIMGDHE L Sbjct: 174 FAALVPNSADKILGEVIEEIMGDHEML 200
>tr|Q336V6|Q336V6_ORYSJ Os10g0545100 protein OS=Oryza sativa subsp. japonica GN=Os10g0545100 PE=4 SV=2 Length = 315
Score = 187 bits (474), Expect = 5e-46 Identities = 85/147 (57%), Positives = 113/147 (76%), Gaps = 3/147 (2%) Frame = +1
Query: 175 EGLPAELLE---DAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVLI 345 EG+P EL+E D+KFVP+N +DP YGPPAL+L+GF E KVQ L+ + G+FLKV+ Sbjct: 54 EGVPGELMEEEEDSKFVPLNAEDPMYGPPALLLIGFEEGETNKVQEFLRELDGEFLKVIH 113
Query: 346 CTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPTA 525 CT++M K TLW+AMH QP +E +K +K +PRIC SGLTGEE+MMF+ ++P+ LEP A Sbjct: 114 CTEEMTKQTLWDAMHTEQPSIEAVKIAKSMPRICIFSGLTGEEMMMFINSYPETGLEPAA 173
Query: 526 FAAMVPNNAQKTIEELMEEIMGDHERL 606 FAA+VPN+A K + E++EEIMGDHE L Sbjct: 174 FAALVPNSADKILGEVIEEIMGDHEML 200
>tr|B8BI34|B8BI34_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34530 PE=4 SV=1 Length = 210
Score = 187 bits (474), Expect = 5e-46 Identities = 85/147 (57%), Positives = 113/147 (76%), Gaps = 3/147 (2%) Frame = +1
Query: 175 EGLPAELLE---DAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVLI 345 EG+P EL+E D+KFVP+N +DP YGPPAL+L+GF E KVQ L+ + G+FLKV+ Sbjct: 54 EGVPGELMEEEEDSKFVPLNAEDPMYGPPALLLIGFEEGETNKVQEFLRELDGEFLKVIH 113
Query: 346 CTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPTA 525 CT++M K TLW+AMH QP +E +K +K +PRIC SGLTGEE+MMF+ ++P+ LEP A Sbjct: 114 CTEEMTKQTLWDAMHTEQPSIEAVKIAKSMPRICIFSGLTGEEMMMFINSYPETGLEPAA 173
Query: 526 FAAMVPNNAQKTIEELMEEIMGDHERL 606 FAA+VPN+A K + E++EEIMGDHE L Sbjct: 174 FAALVPNSADKILGEVIEEIMGDHEML 200
>tr|A3BV81|A3BV81_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026953 PE=4 SV=1 Length = 345
Score = 187 bits (474), Expect = 5e-46 Identities = 85/147 (57%), Positives = 113/147 (76%), Gaps = 3/147 (2%) Frame = +1
Query: 175 EGLPAELLE---DAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVLI 345 EG+P EL+E D+KFVP+N +DP YGPPAL+L+GF E KVQ L+ + G+FLKV+ Sbjct: 54 EGVPGELMEEEEDSKFVPLNAEDPMYGPPALLLIGFEEGETNKVQEFLRELDGEFLKVIH 113
Query: 346 CTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPTA 525 CT++M K TLW+AMH QP +E +K +K +PRIC SGLTGEE+MMF+ ++P+ LEP A Sbjct: 114 CTEEMTKQTLWDAMHTEQPSIEAVKIAKSMPRICIFSGLTGEEMMMFINSYPETGLEPAA 173
Query: 526 FAAMVPNNAQKTIEELMEEIMGDHERL 606 FAA+VPN+A K + E++EEIMGDHE L Sbjct: 174 FAALVPNSADKILGEVIEEIMGDHEML 200
>tr|Q8H188|Q8H188_ARATH Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1 Length = 200
Score = 182 bits (461), Expect = 2e-44 Identities = 84/148 (56%), Positives = 112/148 (75%) Frame = +1
Query: 163 RASTEGLPAELLEDAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVL 342 R S + +P L ED+KFVP++ DP++GPP L+L+G EA K+Q LLK + G+F++++ Sbjct: 47 RNSAQEIPKTLEEDSKFVPLDPQDPRFGPPVLLLLGLQLHEAQKIQELLKELDGEFMEIV 106
Query: 343 ICTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPT 522 CTDDMIK +LW A+ QP+L+ +K ++ +PRICFLSGLTGEE+MMF+ AFP+ LEP Sbjct: 107 FCTDDMIKRSLWEAVTTKQPDLKRVKIAESLPRICFLSGLTGEEMMMFIDAFPETGLEPV 166
Query: 523 AFAAMVPNNAQKTIEELMEEIMGDHERL 606 FAAMVPN+A K I EL EEIMGDHE L Sbjct: 167 VFAAMVPNSADKPIFELTEEIMGDHELL 194
>tr|Q56XK4|Q56XK4_ARATH Putative uncharacterized protein At3g10405 (Fragment) OS=Arabidopsis thaliana GN=At3g10405 PE=2 SV=1 Length = 199
Score = 182 bits (461), Expect = 2e-44 Identities = 84/148 (56%), Positives = 112/148 (75%) Frame = +1
Query: 163 RASTEGLPAELLEDAKFVPINDDDPQYGPPALMLMGFSHSEAVKVQALLKNMQGDFLKVL 342 R S + +P L ED+KFVP++ DP++GPP L+L+G EA K+Q LLK + G+F++++ Sbjct: 46 RNSAQEIPKTLEEDSKFVPLDPQDPRFGPPVLLLLGLQLHEAQKIQELLKELDGEFMEIV 105
Query: 343 ICTDDMIKGTLWNAMHVSQPELEDMKASKDVPRICFLSGLTGEELMMFVRAFPDAKLEPT 522 CTDDMIK +LW A+ QP+L+ +K ++ +PRICFLSGLTGEE+MMF+ AFP+ LEP Sbjct: 106 FCTDDMIKRSLWEAVTTKQPDLKRVKIAESLPRICFLSGLTGEEMMMFIDAFPETGLEPV 165
Query: 523 AFAAMVPNNAQKTIEELMEEIMGDHERL 606 FAAMVPN+A K I EL EEIMGDHE L Sbjct: 166 VFAAMVPNSADKPIFELTEEIMGDHELL 193
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