DK960897 |
Clone id |
TST39A01NGRL0008_K11 |
Library |
TST39 |
Length |
682 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_K11. 5' end sequence. |
Accession |
DK960897 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3149Contig1 |
Sequence |
GAAGATGCAGGGGAGCCTACAGAAGGCAAGCTAGAGGAATTAGTTGAGAAGAAAAATGGA CAAGATGCGAAGACCTCTGTTGTTGGCGATGATGAGAAGGGCGTTCAACAAAGCACTACT GTGTTTGTCTTTTGGGCTTATGTTGCAGCATTCGTCGCCTTGCTCACCCTCTCTATGCTT CTCATCTCCAGCGTCATCCCGCCTGATGAAGAAACAGAGTTCTTTTCCATGCCCCCAGAC GTGCGGCAACACTATAGTAAAGGCAAGCACCTCAAGATTGAGGTGGGTAAGGATCGCCTG CCCATTAAAGTGTTTGTGAGAGAAGAAGGAACCCTCACAATGTCGGAAACTGTACTTCTT TGTCACGGCCTGGGTGCTAGCTCTTTTACATACCGGTCTCTCATTTCGAGCTTAGCTTCC CTCGGTTTGCATGTCATTGCGCTGGATTTCCCTGGTGCTGGGCTTTCTGAGAAGCCTGCT GCGAATCAAGGTGGCCTCTTCTCGAAGCTCAGGGAGATCTACAAAGAGATATTAGAGAAA GGCTTGCTTTGGAGGTTCGAACAGATGTTTGAAACGGGTGCTTTTCCCGACCACGCACCA ACACTAGAAGTAGGTGTTCAGTATGATGCAGGGGATTTGAGTGAAAGCATTGCTCAAGTG GTAACCTTGCTAGCTCCTTCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FZ33 |
Definition |
sp|Q9FZ33|AXR4_ARATH Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana |
Align length |
148 |
Score (bit) |
124.0 |
E-value |
6.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PS83 |
Definition |
tr|A7PS83|A7PS83_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
147 |
Score (bit) |
113.0 |
E-value |
1.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960897|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_K11, 5' (682 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PS83|A7PS83_VITVI Chromosome chr14 scaffold_27, whole genom... 113 1e-23 tr|A9RVE8|A9RVE8_PHYPA Predicted protein OS=Physcomitrella paten... 97 1e-18 tr|Q2R2Z8|Q2R2Z8_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 64 7e-09 tr|A6SWG4|A6SWG4_JANMA Uncharacterized conserved protein OS=Jant... 54 7e-06 tr|B8FAJ5|B8FAJ5_9DELT Alpha/beta hydrolase fold protein OS=Desu... 53 2e-05 tr|Q1R166|Q1R166_CHRSD Alpha/beta hydrolase OS=Chromohalobacter ... 53 2e-05 tr|A4CDU4|A4CDU4_9GAMM Hydrolase, alpha/beta hydrolase fold fami... 52 4e-05 tr|A0M339|A0M339_GRAFK Alpha/beta fold hydrolase OS=Gramella for... 52 5e-05 tr|Q5R0U5|Q5R0U5_IDILO Alpha/beta superfamily hydrolase OS=Idiom... 51 6e-05 tr|Q7WP59|Q7WP59_BORBR Putative hydrolase OS=Bordetella bronchis... 51 8e-05 tr|Q7W1F1|Q7W1F1_BORPA Putative hydrolase OS=Bordetella parapert... 51 8e-05 tr|Q7VUJ2|Q7VUJ2_BORPE Putative hydrolase OS=Bordetella pertussi... 51 8e-05 tr|B2HDF1|B2HDF1_MYCMM Haloalkane dehalogenase OS=Mycobacterium ... 51 8e-05 tr|A4WA42|A4WA42_ENT38 Alpha/beta hydrolase fold OS=Enterobacter... 51 8e-05 tr|Q9SSQ3|Q9SSQ3_ARATH F6D8.27 protein OS=Arabidopsis thaliana G... 51 8e-05 tr|Q8VZ57|Q8VZ57_ARATH Putative uncharacterized protein At1g5251... 51 8e-05 tr|Q6D1E3|Q6D1E3_ERWCT Putative hydrolase OS=Erwinia carotovora ... 50 1e-04 tr|Q683C5|Q683C5_ARATH Putative uncharacterized protein At1g5251... 50 1e-04 tr|Q67Y31|Q67Y31_ARATH Putative uncharacterized protein At1g5251... 50 1e-04 tr|B2EMA3|B2EMA3_9BACT Alpha/beta hydrolase fold OS=bacterium El... 50 1e-04 tr|Q07MN4|Q07MN4_RHOP5 Alpha/beta hydrolase fold OS=Rhodopseudom... 50 2e-04 tr|A4AWU9|A4AWU9_9FLAO Hydrolase, alpha/beta hydrolase fold fami... 50 2e-04 tr|A9RB19|A9RB19_PHYPA Predicted protein OS=Physcomitrella paten... 50 2e-04 tr|B2J4W6|B2J4W6_NOSP7 Alpha/beta hydrolase fold protein OS=Nost... 48 5e-04 tr|B7FFC5|B7FFC5_MEDTR Putative uncharacterized protein (Fragmen... 48 7e-04 tr|Q1IK78|Q1IK78_ACIBL Alpha/beta hydrolase OS=Acidobacteria bac... 47 9e-04 tr|A5G7L9|A5G7L9_GEOUR Alpha/beta hydrolase fold OS=Geobacter ur... 47 9e-04 tr|B3KJU0|B3KJU0_9BACI Alpha/beta hydrolase fold OS=Geobacillus ... 47 9e-04 tr|B1G314|B1G314_9BURK Alpha/beta hydrolase fold OS=Burkholderia... 47 9e-04 tr|Q6N645|Q6N645_RHOPA Epoxide hydrolase OS=Rhodopseudomonas pal... 47 0.001
>tr|A7PS83|A7PS83_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022803001 PE=4 SV=1 Length = 474
Score = 113 bits (283), Expect = 1e-23 Identities = 55/147 (37%), Positives = 85/147 (57%), Gaps = 4/147 (2%) Frame = +1
Query: 160 LLTLSMLLISSVIPPDEETEFFSMPPDVRQHYSKGKHLKIEVGKDRLPIKVFVREEGTLT 339 L T + S+ P D ++ F S+P ++R HYSKG+ +K++ P +VF +EG Sbjct: 52 LATFLFSSLPSLSPQDPKSWFLSLPTNLRHHYSKGRIIKVQTDAHHPPFEVFTVQEGAKA 111
Query: 340 MSETVLLCHGLGASSFTYRSLISSLASLGLHVIALDFPGAGLSEKPA----ANQGGLFSK 507 SE V++ HGLG+SS+ +R++I L S G+H + +D PG+G S+K GG+ + Sbjct: 112 -SENVVIVHGLGSSSYAFRNVIQFLGSRGVHAVGVDLPGSGFSDKSVLVEEMGDGGVLGR 170
Query: 508 LREIYKEILEKGLLWRFEQMFETGAFP 588 E+Y I EKG W F+ + ETG P Sbjct: 171 FSEVYSLIQEKGFFWAFDHLVETGQMP 197
>tr|A9RVE8|A9RVE8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161269 PE=4 SV=1 Length = 634
Score = 97.1 bits (240), Expect = 1e-18 Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Frame = +1
Query: 163 LTLSMLLISSVIPPDEETEFFSMPPDVRQHYSKGKHLKIEVGKDRLPIKVFVREE-GTLT 339 + L ++ +S++ + + E SMP VR+H+ GK +K+EVG+DR P+K+FVR Sbjct: 91 IMLVFVVGTSILNSNVKIEILSMPTGVREHFEAGKQVKVEVGRDRSPVKMFVRASVDPHA 150
Query: 340 MSETVLLCHGLGASSFTYRSLISSLASLGLHVIALDFPGAGLSEK 474 +ETVLL HGLG+SSF YR L+ LA+ L +A+D PGAGLSEK Sbjct: 151 GAETVLLLHGLGSSSFLYRQLLPLLAAKQLAAVAVDLPGAGLSEK 195
>tr|Q2R2Z8|Q2R2Z8_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0544100 PE=4 SV=1 Length = 489
Score = 64.3 bits (155), Expect = 7e-09 Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 3/149 (2%) Frame = +1
Query: 163 LTLSMLLISSVIPPDEETEFFSMPPDVRQHYSKGKHLKIEVGKDRLPIKVFVREEGTLTM 342 L L LL SS PP +P +R H S G LK+ G D V + T T Sbjct: 122 LLLPHLLPSSSPPPP-------LPSLLRSHASGGSVLKLHPGPDLFA----VTSKPTTTA 170
Query: 343 SE---TVLLCHGLGASSFTYRSLISSLASLGLHVIALDFPGAGLSEKPAANQGGLFSKLR 513 + VL+ GL A SF++R + SL+S GL A+D PG G+S P + + Sbjct: 171 AAHRPAVLVLPGLAAGSFSFRHALRSLSSRGLLAAAVDLPGQGMS--PPCDAPPPPPPSK 228
Query: 514 EIYKEILEKGLLWRFEQMFETGAFPDHAP 600 ++EI+++G+ FE + ETG P P Sbjct: 229 SAFREIMDRGVFHAFEHLVETGEVPFQEP 257
>tr|A6SWG4|A6SWG4_JANMA Uncharacterized conserved protein OS=Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) GN=mma_0921 PE=4 SV=1 Length = 325
Score = 54.3 bits (129), Expect = 7e-06 Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Frame = +1
Query: 274 KIEVGKDRLPIKVFVREEGTLTMSETVLLCHGLGASSFTYRSLISSLASLGLHVIALDFP 453 K++VG +KVF RE G + T+LL HG SSF YR+LI LA HV+A D P Sbjct: 45 KVDVGD----VKVFYREAGDPS-KPTILLLHGFPTSSFMYRNLIPLLAD-RYHVVAPDLP 98
Query: 454 GAGLSEKP-AANQGGLFSKLREIYKEILEK-GLLWRFEQMFETGA 582 G G +E P A+ F L ++ +K GL Q+F+ GA Sbjct: 99 GFGFTEAPDRAHFKYTFENLAKVIDGFTQKLGLSHYALQIFDYGA 143
>tr|B8FAJ5|B8FAJ5_9DELT Alpha/beta hydrolase fold protein OS=Desulfatibacillum alkenivorans AK-01 GN=Dalk_1593 PE=3 SV=1 Length = 313
Score = 53.1 bits (126), Expect = 2e-05 Identities = 26/65 (40%), Positives = 40/65 (61%) Frame = +1
Query: 352 VLLCHGLGASSFTYRSLISSLASLGLHVIALDFPGAGLSEKPAANQGGLFSKLREIYKEI 531 V L HG G+S++T+R +I L++ G HVIALD G G S+KP + ++ + E+ + Sbjct: 65 VFLVHGFGSSTYTWRDVIPPLSNQGFHVIALDMKGFGWSDKPLGDDYTPYNLMEEVNAFM 124
Query: 532 LEKGL 546 KGL Sbjct: 125 EAKGL 129
>tr|Q1R166|Q1R166_CHRSD Alpha/beta hydrolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=Csal_0178 PE=4 SV=1 Length = 323
Score = 52.8 bits (125), Expect = 2e-05 Identities = 33/74 (44%), Positives = 42/74 (56%) Frame = +1
Query: 268 HLKIEVGKDRLPIKVFVREEGTLTMSETVLLCHGLGASSFTYRSLISSLASLGLHVIALD 447 H ++E D +KVF RE G + VLL HG ASS+ +R +I +LA G HVIA D Sbjct: 31 HYRVEQVGD---VKVFYREAGD-PAAPAVLLLHGFAASSYMWRDVIEALAD-GYHVIAPD 85
Query: 448 FPGAGLSEKPAANQ 489 P G +E PA Q Sbjct: 86 LPAFGYTEAPARGQ 99
>tr|A4CDU4|A4CDU4_9GAMM Hydrolase, alpha/beta hydrolase fold family protein OS=Pseudoalteromonas tunicata D2 GN=PTD2_05680 PE=4 SV=1 Length = 320
Score = 52.0 bits (123), Expect = 4e-05 Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1
Query: 277 IEVGKDRLPIKVFVREEGTLTMSETVLLCHGLGASSFTYRSLISSLASLGLHVIALDFPG 456 IEV K +F RE G + + T++L HG SS YR+LI LA HVIA D+PG Sbjct: 45 IEVAKQT----IFYREAGDVK-APTIVLLHGFPTSSHMYRNLIPKLAEQ-YHVIAPDYPG 98
Query: 457 AGLSEKPAANQGGL-FSKLREIYKEILEK 540 G S PA N+ F L +I E L K Sbjct: 99 FGNSSMPAINEFEYSFDNLAKITNEFLTK 127
>tr|A0M339|A0M339_GRAFK Alpha/beta fold hydrolase OS=Gramella forsetii (strain KT0803) GN=GFO_2069 PE=4 SV=1 Length = 290
Score = 51.6 bits (122), Expect = 5e-05 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = +1
Query: 241 VRQHYSKGKHLKIEVGKDRLPIKVFVREEGTLTMSETVLLCHGLGASSFTYRSLISSLAS 420 + H GK+L++ IK F + G+ E V HG+ SS+ YR +I SLA+ Sbjct: 9 ISTHERSGKYLEVN------GIKTFALDRGS---GEAVFCIHGVPTSSYLYRKVIDSLAA 59
Query: 421 LGLHVIALDFPGAGLSEKP 477 G +++D PG GL+++P Sbjct: 60 KGFRGVSVDLPGLGLADRP 78
>tr|Q5R0U5|Q5R0U5_IDILO Alpha/beta superfamily hydrolase OS=Idiomarina loihiensis GN=IL1604 PE=4 SV=1 Length = 315
Score = 51.2 bits (121), Expect = 6e-05 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Frame = +1
Query: 304 IKVFVREEGTLTMSETVLLCHGLGASSFTYRSLISSLASLGLHVIALDFPGAGLSEKPAA 483 ++VF RE G TVL+ HG ASSF +R +I +LA HV+ALD P G +E Sbjct: 41 VRVFYREAGNEN-DPTVLMLHGFAASSFMWRDVIDALAD-DYHVVALDLPAFGFTEVSGD 98
Query: 484 NQ-GGLFSKLREIYKEILEKGLLWRF 558 ++ F+ L E ++ +E+ L +F Sbjct: 99 DEYSYTFANLTETVEKFIEQKELTKF 124
>tr|Q7WP59|Q7WP59_BORBR Putative hydrolase OS=Bordetella bronchiseptica GN=BB0826 PE=4 SV=1 Length = 294
Score = 50.8 bits (120), Expect = 8e-05 Identities = 28/59 (47%), Positives = 36/59 (61%) Frame = +1
Query: 304 IKVFVREEGTLTMSETVLLCHGLGASSFTYRSLISSLASLGLHVIALDFPGAGLSEKPA 480 +K+F RE G S VLL HG ASS+ YR +I++LA G V+A D P G +E PA Sbjct: 21 VKIFYREAGD-PASPAVLLLHGFAASSYMYRDVIAALAD-GYRVVAPDLPSFGFTESPA 77
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