DK960905 |
Clone id |
TST39A01NGRL0008_K19 |
Library |
TST39 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_K19. 5' end sequence. |
Accession |
DK960905 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL90Contig1 |
Sequence |
GAGGCGTCTTCGTAAACGTATCCATCAGCCAGCCCTCTTCTGCAAATCCTAGATTCAACG AGCTCTCTCCTCCTCCTCCACCCTGAGAGAGTGCATCTCCGTCCACATTGGTCAGGCTGG CATCCAGGTCGGGAATGCATGCTGGGAGCTCTACTGCCTCGAGCATGGAATCCATCCAGA TGGACAGATGCCCAGTGACAAGACTGTGGGTGGCGGTGATGATGCCTTTAACACCTTCTT CAGTGAGACGGGGGCGGGAAAGCATGTTCCTCGAGCTGTGTTTGTCGATTTAGAGCCCAC TGTGATTGATGAAGTCCGTACTGGTACTTACAGACAGCTCTTTCATCCTGAGCAGCTCAT CAGTGGCAAATATGATGCTGCCCCCAACTTTGCCCGTGGCCATTATACCAAAGAGAAAGG AGATTGTTGATCTTTGCCTCGACCGCATCAGGAAGCTTGCAGATAACTGCACCGGTCTGC AGGGTTTTCTTGTCTTCCATGCTGTTGGAGGTGGAACTGGTTCTGGCCTTGCATCCCTTC TTTTGGAAAGGCTATCTGTGGACTATGGGAAGAAATCAAAGCTTGGATTCACTGTTTATC CGTCTCCCCAGGTGTCCACATCTGTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29510 |
Definition |
sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana |
Align length |
109 |
Score (bit) |
223.0 |
E-value |
2.0e-84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960905|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_K19, 5' (627 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsi... 223 2e-84 sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA... 222 6e-84 sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thalia... 222 6e-84 sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN... 222 6e-84 sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum... 221 8e-84 sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum... 221 8e-84 sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA ... 221 1e-83 sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain OS=Anemia phyllitidis... 218 2e-83 sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUB... 220 2e-83 sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp... 219 3e-83 sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain OS=Gossypium hirsutum... 220 4e-83 sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare GN... 220 5e-83 sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 ... 218 7e-83 sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 ... 218 7e-83 sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain OS=Eleusine indica GN... 218 7e-83 sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain OS=Triticum aestivum GN=... 220 1e-82 sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain OS=Chlorella vulgaris GN... 216 6e-82 sp|P41351|TBA_TETTH Tubulin alpha chain OS=Tetrahymena thermophi... 214 6e-81 sp|P10872|TBA_TETPY Tubulin alpha chain OS=Tetrahymena pyriformi... 214 6e-81 sp|P09205|TBA2_CHLRE Tubulin alpha-2 chain OS=Chlamydomonas rein... 216 1e-80 sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox car... 216 1e-80 sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain OS=Chlamydomonas rein... 216 1e-80 sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 ... 209 9e-80 sp|P28287|TBA_OXYGR Tubulin alpha chain OS=Oxytricha granulifera... 212 2e-79 sp|P07304|TBA1_STYLE Tubulin alpha-1 chain OS=Stylonychia lemnae... 211 3e-79 sp|Q08114|TBA_EUPOC Tubulin alpha chain OS=Euplotes octocarinatu... 212 6e-79 sp|Q3ZCJ7|TBA1C_BOVIN Tubulin alpha-1C chain OS=Bos taurus GN=TU... 219 8e-79 sp|P36220|TBA_TORMA Tubulin alpha chain OS=Torpedo marmorata PE=... 218 1e-78 sp|P06605|TBA3_DROME Tubulin alpha-3 chain OS=Drosophila melanog... 218 1e-78 sp|Q6AYZ1|TBA1C_RAT Tubulin alpha-1C chain OS=Rattus norvegicus ... 218 1e-78
>sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1 Length = 450
Score = 223 bits (569), Expect(2) = 2e-84 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-84 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1 Length = 450
Score = 222 bits (565), Expect(2) = 6e-84 Identities = 103/109 (94%), Positives = 105/109 (96%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 6e-84 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1 Length = 450
Score = 222 bits (565), Expect(2) = 6e-84 Identities = 103/109 (94%), Positives = 105/109 (96%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 6e-84 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1 Length = 451
Score = 222 bits (565), Expect(2) = 6e-84 Identities = 103/109 (94%), Positives = 105/109 (96%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 6e-84 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1 Length = 450
Score = 221 bits (564), Expect(2) = 8e-84 Identities = 103/109 (94%), Positives = 105/109 (96%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 8e-84 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1 Length = 450
Score = 221 bits (564), Expect(2) = 8e-84 Identities = 103/109 (94%), Positives = 105/109 (96%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 8e-84 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1 Length = 451
Score = 221 bits (563), Expect(2) = 1e-83 Identities = 102/109 (93%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECISVHIGQAGIQ+GNACWELYCLEHGI P+GQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (272), Expect(2) = 1e-83 Identities = 55/70 (78%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQ+STSV Sbjct: 172 YPSPQISTSV 181
>sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUBA1 PE=2 SV=1 Length = 451
Score = 218 bits (554), Expect(2) = 2e-83 Identities = 102/109 (93%), Positives = 105/109 (96%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNA WELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNARWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVF+DLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 112 bits (280), Expect(2) = 2e-83 Identities = 58/70 (82%), Positives = 58/70 (82%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVFHAV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGXTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1 Length = 452
Score = 220 bits (560), Expect(2) = 2e-83 Identities = 102/109 (93%), Positives = 104/109 (95%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1 Length = 451
Score = 219 bits (559), Expect(2) = 3e-83 Identities = 102/109 (93%), Positives = 104/109 (95%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 3e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PMS7 |
Definition |
tr|A7PMS7|A7PMS7_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
109 |
Score (bit) |
222.0 |
E-value |
9.0e-84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960905|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_K19, 5' (627 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PMS7|A7PMS7_VITVI Chromosome chr14 scaffold_21, whole genom... 222 9e-84 tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 224 2e-83 tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii ... 223 2e-83 tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 P... 223 2e-83 tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Popul... 223 2e-83 tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidop... 223 2e-83 tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1 223 2e-83 tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 223 2e-83 tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila ... 223 2e-83 tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genom... 223 3e-83 tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii G... 223 3e-83 tr|A9PL16|A9PL16_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 223 6e-83 tr|A9P817|A9P817_POPTR Putative uncharacterized protein OS=Popul... 222 7e-83 tr|A5YRY1|A5YRY1_POPTM Alpha-tubulin 5 OS=Populus tremuloides PE... 222 7e-83 tr|A4K4Y4|A4K4Y4_WHEAT Alpha tubulin-3B (Alpha tubulin-3A) (Alph... 222 7e-83 tr|Q1ZZV1|Q1ZZV1_BRACM Tubulin alpha-1 chain OS=Brassica rapa su... 222 7e-83 tr|A9PL21|A9PL21_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 219 7e-83 tr|Q3EA24|Q3EA24_ARATH Uncharacterized protein At4g14960.1 OS=Ar... 222 7e-83 tr|Q8H6L8|Q8H6L8_GOSHI Alpha-tubulin 4 (Fragment) OS=Gossypium h... 222 7e-83 tr|Q8VXC9|Q8VXC9_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 222 9e-83 tr|A5BZF5|A5BZF5_VITVI Putative uncharacterized protein (Chromos... 221 9e-83 tr|Q8VXD1|Q8VXD1_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 222 9e-83 tr|Q38JI1|Q38JI1_SOLTU Putative uncharacterized protein OS=Solan... 222 9e-83 tr|A9PL18|A9PL18_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 221 9e-83 tr|Q8VXD0|Q8VXD0_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 221 1e-82 tr|Q9M3T2|Q9M3T2_BETVE Alpha-tubulin OS=Betula verrucosa GN=atub... 221 1e-82 tr|Q84XV0|Q84XV0_POPTM Alpha tubulin OS=Populus tremuloides PE=2... 221 1e-82 tr|Q84TK6|Q84TK6_POPTM Alpha-tubulin 1 OS=Populus tremuloides PE... 221 1e-82 tr|A9SEI4|A9SEI4_PHYPA Predicted protein OS=Physcomitrella paten... 221 1e-82 tr|A9PHZ8|A9PHZ8_POPTR Putative uncharacterized protein OS=Popul... 221 1e-82
>tr|A7PMS7|A7PMS7_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020930001 PE=3 SV=1 Length = 450
Score = 222 bits (566), Expect(2) = 9e-84 Identities = 103/109 (94%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVF+DLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 112 bits (280), Expect(2) = 9e-84 Identities = 57/70 (81%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVFHAV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA6 PE=2 SV=1 Length = 450
Score = 224 bits (570), Expect(2) = 2e-83 Identities = 105/109 (96%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECISVHIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii var. menziesii GN=AT1 PE=3 SV=1 Length = 451
Score = 223 bits (569), Expect(2) = 2e-83 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 PE=2 SV=1 Length = 451
Score = 223 bits (569), Expect(2) = 2e-83 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 451
Score = 223 bits (569), Expect(2) = 2e-83 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=At1g04820 PE=2 SV=1 Length = 450
Score = 223 bits (569), Expect(2) = 2e-83 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1 Length = 450
Score = 223 bits (569), Expect(2) = 2e-83 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA10 PE=2 SV=1 Length = 450
Score = 223 bits (569), Expect(2) = 2e-83 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECISVHIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila PE=2 SV=1 Length = 450
Score = 223 bits (569), Expect(2) = 2e-83 Identities = 104/109 (95%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 2e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
>tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010650001 PE=3 SV=1 Length = 451
Score = 223 bits (568), Expect(2) = 3e-83 Identities = 103/109 (94%), Positives = 106/109 (97%) Frame = +2
Query: 83 LRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 262 +RECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKT+GGGDDAFNTFFSETGAGK Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKYDAAPNFARGHYT 409 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK DAA NFARGHYT Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Score = 109 bits (273), Expect(2) = 3e-83 Identities = 56/70 (80%), Positives = 57/70 (81%) Frame = +3
Query: 417 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTV 596 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV ERLSVDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 597 YPSPQVSTSV 626 YPSPQVSTSV Sbjct: 172 YPSPQVSTSV 181
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