DK960917 |
Clone id |
TST39A01NGRL0008_L08 |
Library |
TST39 |
Length |
610 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_L08. 5' end sequence. |
Accession |
DK960917 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL34Contig1 |
Sequence |
GGGCAGAAAAAATCAAGCACTTGTGAAGTCGCTGGCAGAAACTCAGACGCCTCCGTACAT GATTATTGCCTGTGCTGATTCAAGAGTGGATCCATGCACTGTGTTGAGCCTTGGACCTGG TGAGGCTTTTGTGCTACGTAACATTGGAAACATGGTTCCACCTTATACCGGGAACTCTTG CTCATCTGCTGCTTCTGCCATTGAGTATGCGGTGCTGCACTTGAAGGTGAAGCATCTTGT TGTCATTGGCCACAGCCGATGTGGTGCCATCAAAGCCTTGATGGGCATTGAAGAGGATGG GTCAAATAGGTTCAGCGAATTCATCGAAGACTGGATTCTGATTTCGAAAACTGCCTCTAA GAAGGTGAAGAGCTTGCACCAATCTGCTGAATTTACAGAGCAGTGTACAAAGTGTGAGAA GGAGAATGTAAACAATGCGTTGTGGAACTGCCTTTCATACCCATTTGTTAGAGAAAAGAT GTCTTCAGGGGAGTTGACTCTTCATGGCGGTTACTATGATTTTGTGAACAATGCATTTGA GAGTTGGTCGGTAGATTTGGCATCAATGTCGAANGTCGAAAAGGTGCATTAAGTGGGTAC AGACTGTCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P17067 |
Definition |
sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum |
Align length |
188 |
Score (bit) |
179.0 |
E-value |
1.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960917|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_L08, 5' (610 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sa... 179 1e-44 sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian... 176 8e-44 sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria... 176 1e-43 sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis P... 176 1e-43 sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicoti... 175 2e-43 sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2... 174 2e-43 sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=... 174 4e-43 sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid... 173 5e-43 sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=... 173 7e-43 sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinac... 172 1e-42 sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu... 169 1e-41 sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori J... 94 4e-19 sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongat... 92 2e-18 sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori G... 92 3e-18 sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (st... 91 5e-18 sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (s... 90 1e-17 sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O1... 90 1e-17 sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginos... 86 1e-16 sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenz... 74 6e-13 sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces po... 70 8e-12 sp|P61518|CAN_SHIFL Carbonic anhydrase 2 OS=Shigella flexneri GN... 59 2e-08 sp|P61517|CAN_ECOLI Carbonic anhydrase 2 OS=Escherichia coli (st... 59 2e-08 sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans GN... 57 6e-08 sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisi... 48 5e-05 sp|P64798|Y1315_MYCBO Uncharacterized protein Mb1315 OS=Mycobact... 33 0.88 sp|P64797|Y1284_MYCTU Uncharacterized protein Rv1284/MT1322 OS=M... 33 0.88 sp|Q9PQ79|SYI_UREPA Isoleucyl-tRNA synthetase OS=Ureaplasma parv... 32 2.6 sp|B2KIQ4|WDR76_RHIFE WD repeat-containing protein 76 OS=Rhinolo... 32 3.3 sp|Q5JRA6|MIA3_HUMAN Melanoma inhibitory activity protein 3 OS=H... 32 3.3 sp|Q3E9Z8|FB236_ARATH Putative F-box protein At4g17780 OS=Arabid... 30 9.7
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Length = 328
Score = 179 bits (453), Expect = 1e-44 Identities = 91/188 (48%), Positives = 115/188 (61%) Frame = +2
Query: 8 KNQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSS 187 KN AL LA+ Q+PP+M+ AC+DSRV P VL PGEAFV+RN+ N+VPPY + Sbjct: 138 KNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAG 197
Query: 188 AASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKV 367 +AIEYA IGHS CG IK L+ DG+ ++FIE+W+ I A KV Sbjct: 198 TGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS-TDFIEEWVKIGLPAKAKV 256
Query: 368 KSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESW 547 K+ H A F E CT CEKE VN +L N L+YPFVRE + + L L GGYYDFV +FE W Sbjct: 257 KAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELW 316
Query: 548 SVDLASMS 571 ++ S Sbjct: 317 GLEFGLSS 324
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Length = 259
Score = 176 bits (446), Expect = 8e-44 Identities = 90/181 (49%), Positives = 114/181 (62%) Frame = +2
Query: 11 NQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSSA 190 N AL LA+ Q+P YM+ AC+DSRV P VL PG+AFV+RNI NMVPP+ + Sbjct: 70 NPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGV 129
Query: 191 ASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVK 370 +AIEYA IGHS CG IK LM DG+N ++FIEDW+ I A KV Sbjct: 130 GAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIEDWVKICLPAKSKVL 188
Query: 371 SLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWS 550 + +S+ F +QC +CE+E VN +L N L+YPFVRE + G L L GGYYDFVN +FE W Sbjct: 189 AESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWE 248
Query: 551 V 553 + Sbjct: 249 L 249
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Length = 190
Score = 176 bits (445), Expect = 1e-43 Identities = 89/182 (48%), Positives = 117/182 (64%) Frame = +2
Query: 11 NQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSSA 190 N L LA+ Q+P +++ AC+DSRV P +L PGEAFV+RNI NMVPPY S A Sbjct: 1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGA 60
Query: 191 ASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVK 370 +AIEYA IGHS CG IK LM I +DG+ S+FIE W+ + A KVK Sbjct: 61 GAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPA-SDFIEQWVKLGLPAKSKVK 119
Query: 371 SLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWS 550 + + EF + CTKCEKE VN +L N L+YPFVR+ + + +L+L G +YDFVN AF+ W+ Sbjct: 120 ANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWN 179
Query: 551 VD 556 +D Sbjct: 180 LD 181
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Length = 330
Score = 176 bits (445), Expect = 1e-43 Identities = 86/187 (45%), Positives = 114/187 (60%) Frame = +2
Query: 11 NQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSSA 190 N AL LA+ Q+P +M+ AC+DSRV P VL PGEAFV+RN+ NMVPP+ S Sbjct: 141 NPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGV 200
Query: 191 ASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVK 370 +A+EYA IGHSRCG IK LM ++G + ++FIEDW+ + A KV Sbjct: 201 GAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVV 259
Query: 371 SLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWS 550 + H +QC +CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W+ Sbjct: 260 AEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWA 319
Query: 551 VDLASMS 571 +D S Sbjct: 320 LDFGLSS 326
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 321
Score = 175 bits (443), Expect = 2e-43 Identities = 91/183 (49%), Positives = 111/183 (60%) Frame = +2
Query: 8 KNQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSS 187 KN AL L++ Q+P +M+ AC+DSRV P VL+ PGEAFV+RNI NMVP Y S Sbjct: 131 KNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSG 190
Query: 188 AASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKV 367 +AIEYA IGHS CG IK LM + DGS + FIEDW+ I A KV Sbjct: 191 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSES-TAFIEDWVKIGLPAKAKV 249
Query: 368 KSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESW 547 + H F +QCT CEKE VN +L N L+YPFVRE + L L GG+YDFVN FE W Sbjct: 250 QGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELW 309
Query: 548 SVD 556 ++ Sbjct: 310 GLE 312
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Length = 330
Score = 174 bits (442), Expect = 2e-43 Identities = 86/187 (45%), Positives = 113/187 (60%) Frame = +2
Query: 11 NQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSSA 190 N AL LA+ Q+P +M+ AC+DSRV P VL PGEAFV+RN+ NMVPP+ S Sbjct: 141 NPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGV 200
Query: 191 ASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVK 370 +A+EYA IGHSRCG IK LM ++G + ++FIEDW+ + A KV Sbjct: 201 GAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVV 259
Query: 371 SLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWS 550 + H +QC CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W+ Sbjct: 260 AEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWA 319
Query: 551 VDLASMS 571 +D S Sbjct: 320 LDFGLSS 326
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Length = 330
Score = 174 bits (440), Expect = 4e-43 Identities = 86/187 (45%), Positives = 113/187 (60%) Frame = +2
Query: 11 NQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSSA 190 N AL LA+ Q+P +M+ AC+DSRV P VL PGEAFV+RN+ NMVPP+ S Sbjct: 141 NPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGV 200
Query: 191 ASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVK 370 +A+EYA IGHSRCG IK LM ++G + ++FIEDW+ + A KV Sbjct: 201 GAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVV 259
Query: 371 SLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWS 550 + H +QC CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W+ Sbjct: 260 AEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWA 319
Query: 551 VDLASMS 571 +D S Sbjct: 320 LDFGLSS 326
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Length = 347
Score = 173 bits (439), Expect = 5e-43 Identities = 94/194 (48%), Positives = 117/194 (60%), Gaps = 2/194 (1%) Frame = +2
Query: 11 NQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSSA 190 N AL LA+ Q+P YM+ AC+DSRV P VL PG+AFV+RNI NMVPP+ Sbjct: 147 NPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGV 206
Query: 191 ASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVK 370 +AIEYA IGHS CG IK LM DG+N ++FIEDW+ I A KV Sbjct: 207 GAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIEDWVKICLPAKSKVI 265
Query: 371 SLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWS 550 S + F +QC +CE+E VN +L N L+YPFVRE + G L L GGYYDFV AFE W Sbjct: 266 SELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWG 325
Query: 551 VD--LASMSXVEKV 586 ++ L+ S V+ V Sbjct: 326 LEFGLSETSSVKDV 339
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Length = 329
Score = 173 bits (438), Expect = 7e-43 Identities = 85/187 (45%), Positives = 112/187 (59%) Frame = +2
Query: 11 NQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSSA 190 N L LA+ Q+P +M+ AC+DSRV P VL PGEAFV+RN+ NMVPP+ S Sbjct: 140 NPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGV 199
Query: 191 ASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKVK 370 +A+EYA IGHSRCG IK LM ++G + ++FIEDW+ + A KV Sbjct: 200 GAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIEDWVKVCLPAKSKVV 258
Query: 371 SLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESWS 550 + H +QC CEKE VN +L N L+YPFVR+ + + L L GG+YDFVN FE W+ Sbjct: 259 AEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWA 318
Query: 551 VDLASMS 571 +D S Sbjct: 319 LDFGLSS 325
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Length = 319
Score = 172 bits (436), Expect = 1e-42 Identities = 88/183 (48%), Positives = 112/183 (61%) Frame = +2
Query: 8 KNQALVKSLAETQTPPYMIIACADSRVDPCTVLSLGPGEAFVLRNIGNMVPPYTGNSCSS 187 KN AL L++ Q P +M+ AC+DSRV P VL PGEAF++RNI NMVP + + + Sbjct: 129 KNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAG 188
Query: 188 AASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIEDWILISKTASKKV 367 +AIEYA IGHS CG IK LM + G ++FIEDW+ I A KV Sbjct: 189 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTT-TDFIEDWVKICLPAKHKV 247
Query: 368 KSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGGYYDFVNNAFESW 547 + H +A F EQCT CEKE VN +L N L+YPFVR+ + L L GGYYDFVN +FE W Sbjct: 248 LAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELW 307
Query: 548 SVD 556 ++ Sbjct: 308 GLE 310
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94CE4 |
Definition |
tr|Q94CE4|Q94CE4_ARATH Carbonic anhydrase OS=Arabidopsis thaliana |
Align length |
183 |
Score (bit) |
182.0 |
E-value |
2.0e-44 |
Report |
|