DK960921 |
Clone id |
TST39A01NGRL0008_L13 |
Library |
TST39 |
Length |
690 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_L13. 5' end sequence. |
Accession |
DK960921 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTGAAAGCCTCTAATGAATCACCAGCAAGGCTGCAAGAGCATTACCGTTTGCAGAAGCAG ACATGTCGCGGGGGTTTCTATAGACCATAACAGTAGAAGCTGCTAGCATTGAAGGTACAT TCTTCTGCAAACCCTAGCCTGCATGATCTCTGGCTAGCTCGCCTATCCCAGGAATACAAA ACCCTAGCCTTCCTCTTTCTTCCTCTCCGCAGGCAAGCGAGCTTCTCACAGAGACAAGGT AACTTCACTATAAAGCCAAGCGTTTCTGCACCACTTTCGACTTCTCCGCTTTCCCACATA GCATCGGAAGCATAACCACACTACCGTCTCGAGGCAAGAAATTATAGAAAGCACACGAGC GGAGTGAACACCATCTGGAAGCTGAAGCCTTGTAACCTGAGGGGACACACTTCAGGGCTC CGGCCACAGAAAACCATGGGTTTAAGCGATAGTCTTGTCAGCATCCTCAATTTCTTGACC TTCTTGCTCTCAATCCCCATAATAGGAGCAGGAGTGTGGCTGGCCAAGCAGCACAGCACT GATTGCTACCGGTTTCTTCAAGGACCTGTCATTGCTTTGGGGGTCTTTATCCTTCTGGTT TCACTTGCTGGCTTCTTCGGCTCCTGCTGCAGAGTTACCTGCTTGCTTTGGATTTACCTA GTTGTCATGTTTCTACTGATACTGTTGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XHG6 |
Definition |
sp|Q5XHG6|TS31A_XENLA Tetraspanin-31-A OS=Xenopus laevis |
Align length |
75 |
Score (bit) |
43.1 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3TLS7 |
Definition |
tr|B3TLS7|B3TLS7_ELAGV Senescence-associated protein OS=Elaeis guineensis var. tenera |
Align length |
77 |
Score (bit) |
120.0 |
E-value |
6.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960921|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_L13, 5' (690 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3TLS7|B3TLS7_ELAGV Senescence-associated protein OS=Elaeis g... 120 6e-26 tr|A7PFH9|A7PFH9_VITVI Chromosome chr11 scaffold_14, whole genom... 117 5e-25 tr|A5BRM6|A5BRM6_VITVI Putative uncharacterized protein OS=Vitis... 117 5e-25 tr|Q8S8Q6|Q8S8Q6_ARATH Putative uncharacterized protein At2g2381... 111 5e-23 tr|Q8S8N8|Q8S8N8_ARATH Putative uncharacterized protein At2g2381... 111 5e-23 tr|Q683G1|Q683G1_ARATH Similar to senescence-associated protein ... 110 6e-23 tr|A9NRM9|A9NRM9_PICSI Putative uncharacterized protein OS=Picea... 110 6e-23 tr|A9NV38|A9NV38_PICSI Putative uncharacterized protein OS=Picea... 109 1e-22 tr|Q9SUD4|Q9SUD4_ARATH Senescence-associated protein-like OS=Ara... 108 4e-22 tr|Q84VG2|Q84VG2_ORYSJ Os09g0425900 protein OS=Oryza sativa subs... 107 7e-22 tr|A9PJW4|A9PJW4_POPJC Putative uncharacterized protein OS=Popul... 107 7e-22 tr|A2Z1E9|A2Z1E9_ORYSI Putative uncharacterized protein OS=Oryza... 107 7e-22 tr|B7FIB2|B7FIB2_MEDTR Putative uncharacterized protein OS=Medic... 106 1e-21 tr|Q5UCF4|Q5UCF4_MAIZE Putative uncharacterized protein OS=Zea m... 105 2e-21 tr|Q9M0B7|Q9M0B7_ARATH Senescence-associated protein homolog OS=... 103 1e-20 tr|O81655|O81655_HEMSP Senescence-associated protein 5 OS=Hemero... 102 2e-20 tr|Q8LFB2|Q8LFB2_ARATH Senescence-associated protein-like protei... 100 1e-19 tr|A9TA05|A9TA05_PHYPA Predicted protein OS=Physcomitrella paten... 99 3e-19 tr|Q9M1E7|Q9M1E7_ARATH Putative uncharacterized protein F9K21.18... 99 3e-19 tr|A9PGY6|A9PGY6_POPTR Putative uncharacterized protein OS=Popul... 99 3e-19 tr|B7FIU8|B7FIU8_MEDTR Putative uncharacterized protein OS=Medic... 97 1e-18 tr|A7NZD6|A7NZD6_VITVI Chromosome chr6 scaffold_3, whole genome ... 97 1e-18 tr|Q75L87|Q75L87_ORYSJ Os05g0122800 protein OS=Oryza sativa subs... 93 1e-17 tr|B8AXD3|B8AXD3_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|A9RQS0|A9RQS0_PHYPA Predicted protein OS=Physcomitrella paten... 91 9e-17 tr|B6TBV1|B6TBV1_MAIZE Senescence-associated protein OS=Zea mays... 90 1e-16 tr|B6T3V4|B6T3V4_MAIZE Senescence-associated protein OS=Zea mays... 90 1e-16 tr|A9RCL2|A9RCL2_PHYPA Predicted protein OS=Physcomitrella paten... 90 1e-16 tr|Q9LSS4|Q9LSS4_ARATH Similarity to senescence-associated prote... 90 2e-16 tr|A9TS82|A9TS82_PHYPA Predicted protein OS=Physcomitrella paten... 90 2e-16
>tr|B3TLS7|B3TLS7_ELAGV Senescence-associated protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 270
Score = 120 bits (302), Expect = 6e-26 Identities = 54/77 (70%), Positives = 68/77 (88%) Frame = +1
Query: 442 LSDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFG 621 +S++L+ ILNFLTFLLSIPI+G G+WLA + STDC +FLQGPVIA+GVF+++VSLAG G Sbjct: 4 VSNNLIGILNFLTFLLSIPIVGGGIWLATRGSTDCEKFLQGPVIAVGVFLMVVSLAGLVG 63
Query: 622 SCCRVTCLLWIYLVVMF 672 +CCRVT LLW+YL VMF Sbjct: 64 ACCRVTWLLWVYLFVMF 80
>tr|A7PFH9|A7PFH9_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017103001 PE=4 SV=1 Length = 272
Score = 117 bits (294), Expect = 5e-25 Identities = 52/77 (67%), Positives = 69/77 (89%) Frame = +1
Query: 442 LSDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFG 621 LS++LV ILNF+TFLLS+PI+GAG+WL+ + STDC +FL+ PVIALGVF+++VSLAG G Sbjct: 4 LSNNLVGILNFITFLLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAGLIG 63
Query: 622 SCCRVTCLLWIYLVVMF 672 +CCRV+ LLW+YL+VMF Sbjct: 64 ACCRVSWLLWVYLLVMF 80
>tr|A5BRM6|A5BRM6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035079 PE=4 SV=1 Length = 272
Score = 117 bits (294), Expect = 5e-25 Identities = 52/77 (67%), Positives = 69/77 (89%) Frame = +1
Query: 442 LSDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFG 621 LS++LV ILNF+TFLLS+PI+GAG+WL+ + STDC +FL+ PVIALGVF+++VSLAG G Sbjct: 4 LSNNLVGILNFITFLLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAGLIG 63
Query: 622 SCCRVTCLLWIYLVVMF 672 +CCRV+ LLW+YL+VMF Sbjct: 64 ACCRVSWLLWVYLLVMF 80
>tr|Q8S8Q6|Q8S8Q6_ARATH Putative uncharacterized protein At2g23810 OS=Arabidopsis thaliana GN=At2g23810 PE=4 SV=1 Length = 273
Score = 111 bits (277), Expect = 5e-23 Identities = 50/76 (65%), Positives = 64/76 (84%) Frame = +1
Query: 445 SDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFGS 624 S++LV ILNFL FLLSIPI+ G+WL+++ ST+C RFL PVIALGVF+++V++AG GS Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64
Query: 625 CCRVTCLLWIYLVVMF 672 CCRVT LLW+YL VMF Sbjct: 65 CCRVTWLLWVYLFVMF 80
>tr|Q8S8N8|Q8S8N8_ARATH Putative uncharacterized protein At2g23810 (Fragment) OS=Arabidopsis thaliana GN=At2g23810 PE=4 SV=1 Length = 148
Score = 111 bits (277), Expect = 5e-23 Identities = 50/76 (65%), Positives = 64/76 (84%) Frame = +1
Query: 445 SDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFGS 624 S++LV ILNFL FLLSIPI+ G+WL+++ ST+C RFL PVIALGVF+++V++AG GS Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64
Query: 625 CCRVTCLLWIYLVVMF 672 CCRVT LLW+YL VMF Sbjct: 65 CCRVTWLLWVYLFVMF 80
>tr|Q683G1|Q683G1_ARATH Similar to senescence-associated protein OS=Arabidopsis thaliana GN=At2g23810 PE=2 SV=1 Length = 273
Score = 110 bits (276), Expect = 6e-23 Identities = 50/76 (65%), Positives = 64/76 (84%) Frame = +1
Query: 445 SDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFGS 624 S++LV ILNFL FLLSIPI+ G+WL+++ ST+C RFL PVIALGVF+++V++AG GS Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLVGS 64
Query: 625 CCRVTCLLWIYLVVMF 672 CCRVT LLW+YL VMF Sbjct: 65 CCRVTWLLWVYLFVMF 80
>tr|A9NRM9|A9NRM9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 269
Score = 110 bits (276), Expect = 6e-23 Identities = 46/76 (60%), Positives = 66/76 (86%) Frame = +1
Query: 445 SDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFGS 624 S++++ ILNF+TF+LSIPI+G G+WLA + STDC +FL+ PVIA+GVF+++VS+AG G+ Sbjct: 5 SNNVIGILNFITFVLSIPILGGGIWLANRASTDCEKFLEKPVIAIGVFLMVVSIAGLIGA 64
Query: 625 CCRVTCLLWIYLVVMF 672 CCRV+ LLW+YL+ MF Sbjct: 65 CCRVSWLLWVYLLAMF 80
>tr|A9NV38|A9NV38_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 109 bits (273), Expect = 1e-22 Identities = 48/76 (63%), Positives = 63/76 (82%) Frame = +1
Query: 445 SDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFGS 624 ++S+V ++NFLTFLLSIPI+GAG+WLA +HS DC RFLQ P+I +G I+L+SLAGF G+ Sbjct: 5 TNSIVGLINFLTFLLSIPIVGAGIWLATRHSGDCLRFLQWPIIIIGAAIMLLSLAGFMGA 64
Query: 625 CCRVTCLLWIYLVVMF 672 C RVT L+W+YL MF Sbjct: 65 CFRVTSLMWLYLFFMF 80
>tr|Q9SUD4|Q9SUD4_ARATH Senescence-associated protein-like OS=Arabidopsis thaliana GN=T13J8.160 PE=2 SV=1 Length = 263
Score = 108 bits (269), Expect = 4e-22 Identities = 45/76 (59%), Positives = 61/76 (80%) Frame = +1
Query: 445 SDSLVSILNFLTFLLSIPIIGAGVWLAKQHSTDCYRFLQGPVIALGVFILLVSLAGFFGS 624 S++L+ ILNF TFLLSIPI+ AG+WL K +T+C RFL P++ LG+F++ VS+AG G+ Sbjct: 5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64
Query: 625 CCRVTCLLWIYLVVMF 672 CCRV+CLLW+YL MF Sbjct: 65 CCRVSCLLWLYLFAMF 80
>tr|Q84VG2|Q84VG2_ORYSJ Os09g0425900 protein OS=Oryza sativa subsp. japonica GN=Os09g0425900 PE=2 SV=1 Length = 276
Score = 107 bits (267), Expect = 7e-22 Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 1/78 (1%) Frame = +1
Query: 442 LSDSLVSILNFLTFLLSIPIIGAGVWLA-KQHSTDCYRFLQGPVIALGVFILLVSLAGFF 618 LS+SL+ ILN +TFLLS+P++G G+WLA + T+C R+ PVIA GVF+LLVSLAG Sbjct: 5 LSNSLLGILNAVTFLLSVPVLGGGIWLATRADGTECERYFSAPVIAFGVFLLLVSLAGLV 64
Query: 619 GSCCRVTCLLWIYLVVMF 672 G+CCRV CLLW YLV MF Sbjct: 65 GACCRVNCLLWFYLVAMF 82
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