DK960935
Clone id TST39A01NGRL0008_M03
Library
Length 675
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_M03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGCAGGCCTGCTCGAGCGGAGTTTGTTCGCCACTTGTCTCTCTAGACGAGGGCTTGTAGC
TTGCTGCTTCCATGGCGTCTACTGCCACTAGCCCTACTGTTGGCTCCGTCCAGAATTTCA
CACCAGTAAATGGAACCCCCGTCCGTGTAAGGAGCACCGCTCCTGCTTCTGCCTTCTTTG
GGGCCTCCCTGAAGAAAACCGCCCCTTCCGTTGTATCTAGCAATATTGCCAAGCATTTCG
TTGTGCACGCTTCGGAGGATGAGGGCAAGCAGACGAAGAAGGACAGATGGGCTGGTCTTG
CATATGACACCTCCGATGACCAGCAAGACATCACTCGTGGAAAAGGCATGGTGGACGCTC
TTTTCCAAGGTGCAGTTGGTGTAGGAACTCAACACGCCGTCATGAGTTCGTATGACTATA
TTAGCCAGGGCCAGAGAATGTTCTCCATGGACAACATGAAGGATGGCTATTACATCGCCC
CTGCCTTCATGGACAAACTGGTTGTGCACATTGCCAAGAACTTCATGAACTTACCAAATA
TCAAGGTGCCTTTGATTCTTGGTATTTGGGGTGGCAAGGGGCAAGGCAAGTCCTTCCAGT
GTGAGCTTGTCTTTTCAAAGTTGGGAATCAACCCAATCATGATGAGTGCCGGAGAGCTCG
AGAGTGGCAATGCTG
■■Homology search results ■■ -
sp_hit_id Q7X999
Definition sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata
Align length 183
Score (bit) 254.0
E-value 2.0e-67
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960935|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_M03, 5'
(675 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 254 2e-67
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 254 2e-67
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 247 4e-65
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 247 5e-65
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 246 6e-65
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 246 8e-65
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 244 2e-64
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 243 5e-64
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 243 7e-64
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 239 1e-62
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 238 3e-62
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 237 5e-62
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 236 8e-62
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 234 2e-61
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 222 1e-57
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 178 3e-44
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 100 5e-21
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 100 7e-21
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 98 5e-20
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 39 0.019
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus... 35 0.36
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ... 33 1.1
sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio... 33 1.8
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ... 33 1.8
sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE... 33 1.8
sp|Q4KM73|KCY_RAT UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 P... 32 4.0
sp|Q9DBP5|KCY_MOUSE UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1... 32 4.0
sp|P30085|KCY_HUMAN UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1... 32 4.0
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem... 32 4.0
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom... 32 4.0

>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
PE=2 SV=1
Length = 435

Score = 254 bits (650), Expect = 2e-67
Identities = 125/183 (68%), Positives = 147/183 (80%)
Frame = +3

Query: 126 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 305
+NG+ R S P++AFFG+SLKK+A ++ +V E +QT KD+W GLAY
Sbjct: 18 LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 306 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 485
D SDDQQDITRGKGMVD LFQ + GT +AVMSSYDYISQG R +++DN DG+YIAPA
Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 486 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 665
FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 666 GNA 674
GNA
Sbjct: 197 GNA 199


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
PE=2 SV=1
Length = 476

Score = 254 bits (650), Expect = 2e-67
Identities = 125/183 (68%), Positives = 147/183 (80%)
Frame = +3

Query: 126 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 305
+NG+ R S P++AFFG+SLKK+A ++ +V E +QT KD+W GLAY
Sbjct: 18 LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 306 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 485
D SDDQQDITRGKGMVD LFQ + GT +AVMSSYDYISQG R +++DN DG+YIAPA
Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 486 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 665
FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 666 GNA 674
GNA
Sbjct: 197 GNA 199


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Malus domestica GN=RCA PE=2
SV=1
Length = 437

Score = 247 bits (631), Expect = 4e-65
Identities = 127/193 (65%), Positives = 147/193 (76%), Gaps = 1/193 (0%)
Frame = +3

Query: 99 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFV-VHASEDEGKQT 275
+GSV N P N ++ P+S F G+SLKK +S ++ + + AS DE KQT
Sbjct: 8 IGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQT 66

Query: 276 KKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDN 455
KDRW GLA+DTSDDQQDITRGKG VD+LFQ G GT A+MSSY+YIS G R ++ DN
Sbjct: 67 DKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDN 126

Query: 456 MKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINP 635
DGYYIAPAFMDKLVVHI KNFM LPN+KVPLILGIWGGKGQGKSFQCELVF+K+ I+P
Sbjct: 127 NMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISP 186

Query: 636 IMMSAGELESGNA 674
IMMSAGELESGNA
Sbjct: 187 IMMSAGELESGNA 199


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
Length = 413

Score = 247 bits (630), Expect = 5e-65
Identities = 118/171 (69%), Positives = 139/171 (81%)
Frame = +3

Query: 162 PASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRG 341
P SAF G+ LK ++ S + +F + A +DE KQT+KD+W GLA+DTSDDQQDITRG
Sbjct: 26 PNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRG 85

Query: 342 KGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKN 521
KG+ D LFQ +G GT +AV+SSY+YIS G R +S DN DG+YIAPAFMDKL VHI KN
Sbjct: 86 KGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKN 145

Query: 522 FMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 674
F+ LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 146 FLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 196


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
SV=2
Length = 439

Score = 246 bits (629), Expect = 6e-65
Identities = 126/179 (70%), Positives = 145/179 (81%), Gaps = 5/179 (2%)
Frame = +3

Query: 153 STAPASAFFGASLKKTAPSVVSSNIAKH--FVVHASE---DEGKQTKKDRWAGLAYDTSD 317
++AP SAFFG SLKK S V ++ + F + A+E +E +QT KDRW GLAYD SD
Sbjct: 25 ASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISD 84

Query: 318 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 497
DQQDITRGKGMVD LFQ + GT +AVMSSY+Y+S G R +DN+KDG+YIAPAF+DK
Sbjct: 85 DQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDK 142

Query: 498 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 674
LVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 143 LVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 201


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Oryza sativa subsp. japonica
GN=RCA PE=1 SV=2
Length = 466

Score = 246 bits (628), Expect = 8e-65
Identities = 127/180 (70%), Positives = 139/180 (77%), Gaps = 8/180 (4%)
Frame = +3

Query: 159 APASA---FFGASLKKTAPSVV-----SSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTS 314
APAS F G LKK S V SSNI + V+ DEGKQT +DRW GLAYD S
Sbjct: 11 APASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDIS 70

Query: 315 DDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMD 494
DDQQDITRGKG VD+LFQ G GT AV+SSY+Y+SQG R + DN G+YIAPAFMD
Sbjct: 71 DDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMD 130

Query: 495 KLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 674
KLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 131 KLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 190


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 442

Score = 244 bits (624), Expect = 2e-64
Identities = 127/200 (63%), Positives = 146/200 (73%), Gaps = 10/200 (5%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS----NIAKHFVVHASE 257
SV VN TP+ + ++ P++AFFG +LKK VSS N + V +
Sbjct: 4 SVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQID 63

Query: 258 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 434
D KQT DRW GL D SDDQQDITRGKGMVD+LFQ G GT HAV+ SY+Y+SQG
Sbjct: 64 VDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 435 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 614
R +++DN DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 124 RQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVF 183

Query: 615 SKLGINPIMMSAGELESGNA 674
K+GINPIMMSAGELESGNA
Sbjct: 184 RKMGINPIMMSAGELESGNA 203


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
PE=1 SV=2
Length = 474

Score = 243 bits (621), Expect = 5e-64
Identities = 118/173 (68%), Positives = 137/173 (79%)
Frame = +3

Query: 156 TAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDIT 335
+APAS F G + + S+ + + E KQT DRW GLAYDTSDDQQDIT
Sbjct: 27 SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDIT 86

Query: 336 RGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIA 515
RGKGMVD++FQ +G GT HAV+SSY+Y+SQG R +++DNM DG+YIAPAFMDKLVVHI
Sbjct: 87 RGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHIT 146

Query: 516 KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 674
KNF+ LPNIKVPLILGIWGGKGQGKSFQCELV +K+GINPIMMSAGELESGNA
Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNA 199


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
PE=2 SV=1
Length = 441

Score = 243 bits (620), Expect = 7e-64
Identities = 120/179 (67%), Positives = 147/179 (82%), Gaps = 5/179 (2%)
Frame = +3

Query: 153 STAPASAFFGASLKKTAPSVVSSN--IAKHFVVHASE---DEGKQTKKDRWAGLAYDTSD 317
++ P+SAFFG SLKK S V ++ + F + A++ +E +QT+ DRW GLAYD SD
Sbjct: 25 ASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSD 84

Query: 318 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 497
DQQDITRGKG+VD+LFQ + GT +AV+SS+ Y+S G R ++ DN+KDG+YIAPAF+DK
Sbjct: 85 DQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDK 144

Query: 498 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 674
LVVHIAKNFM LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 145 LVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 203


>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase
activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA
PE=2 SV=1
Length = 439

Score = 239 bits (609), Expect = 1e-62
Identities = 123/200 (61%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS-NIAKHFVVHASE--- 257
SV N P+ + ++ P++AFFG +LKK VSS + + A+E
Sbjct: 4 SVSTIGAANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKD 63

Query: 258 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 434
D KQT DRW GL D SDDQQDI RGKGMVD+LFQ G GT HAV+ SY+Y+SQG
Sbjct: 64 ADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 435 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 614
R ++MDN DG+YIAP+FMDKLVVHI KNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF
Sbjct: 124 RQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVF 183

Query: 615 SKLGINPIMMSAGELESGNA 674
K+GINPIMMSAGELESGNA
Sbjct: 184 RKMGINPIMMSAGELESGNA 203


tr_hit_id A7NYV5
Definition tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 196
Score (bit) 260.0
E-value 6.0e-68
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960935|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_M03, 5'
(675 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 260 6e-68
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 260 6e-68
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 259 1e-67
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 254 5e-66
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 253 6e-66
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 253 6e-66
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 253 8e-66
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea... 253 8e-66
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea... 253 8e-66
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea... 253 8e-66
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 253 1e-65
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 251 3e-65
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 250 5e-65
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 249 9e-65
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 249 9e-65
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=... 249 9e-65
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 248 2e-64
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 246 7e-64
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc... 246 7e-64
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 246 7e-64
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 246 9e-64
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen... 246 9e-64
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 246 9e-64
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ... 245 2e-63
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 243 6e-63
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 243 6e-63
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 243 6e-63
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten... 243 8e-63
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 241 2e-62
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 241 2e-62

>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
PE=4 SV=1
Length = 472

Score = 260 bits (664), Expect = 6e-68
Identities = 133/196 (67%), Positives = 152/196 (77%), Gaps = 6/196 (3%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 266
+V VN TP+ + S+ P+SAFFG+SLKK + IA F V A DE
Sbjct: 4 TVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 267 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 446
+QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ + GT +AVMSSY+Y+S G R ++
Sbjct: 64 EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 447 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 626
+DN DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 627 INPIMMSAGELESGNA 674
INPIMMSAGELESGNA
Sbjct: 184 INPIMMSAGELESGNA 199


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039112 PE=4 SV=1
Length = 472

Score = 260 bits (664), Expect = 6e-68
Identities = 133/196 (67%), Positives = 152/196 (77%), Gaps = 6/196 (3%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 266
+V VN TP+ + S+ P+SAFFG+SLKK + IA F V A DE
Sbjct: 4 TVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 267 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 446
+QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ + GT +AVMSSY+Y+S G R ++
Sbjct: 64 EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 447 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 626
+DN DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 627 INPIMMSAGELESGNA 674
INPIMMSAGELESGNA
Sbjct: 184 INPIMMSAGELESGNA 199


>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
Length = 471

Score = 259 bits (661), Expect = 1e-67
Identities = 131/177 (74%), Positives = 146/177 (82%)
Frame = +3

Query: 144 RVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQ 323
RV+ST P+SAFFG K +A + K VV +E E +TK DRWAGL D SDDQ
Sbjct: 17 RVKSTVPSSAFFGCKSKVSANGTLGIANGKSRVV--AEAESSKTKVDRWAGLGNDISDDQ 74

Query: 324 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 503
QDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQGQR +SMDN+KDG YIAPAFMDKLV
Sbjct: 75 QDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLV 134

Query: 504 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 674
+HIAKNFMNLP IKVPLILGIWGGKGQGKSFQCELV SKLGINPI+MSAGELESGNA
Sbjct: 135 IHIAKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSKLGINPIVMSAGELESGNA 191


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
PE=4 SV=1
Length = 474

Score = 254 bits (648), Expect = 5e-66
Identities = 127/188 (67%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Frame = +3

Query: 114 NFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRW 290
N P+N ++ P+SAF G SLKK + + + +F V A DE KQT KD+W
Sbjct: 12 NRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKW 71

Query: 291 AGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGY 470
GLA+D SDDQQDITRGKGMVD+LFQ + GT +AVMSSYDYIS G R +++DN DG+
Sbjct: 72 KGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGF 131

Query: 471 YIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 650
YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA
Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 191

Query: 651 GELESGNA 674
GELESGNA
Sbjct: 192 GELESGNA 199


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase small protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 437

Score = 253 bits (647), Expect = 6e-66
Identities = 130/197 (65%), Positives = 150/197 (76%), Gaps = 7/197 (3%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 263
+V +N P+ + ST P SAFFG SLKK A + + + F V A DE
Sbjct: 4 AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 264 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 443
KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSYDYIS G R +
Sbjct: 64 NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 444 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 623
++N DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 624 GINPIMMSAGELESGNA 674
GI PIMMSAGELESGNA
Sbjct: 183 GITPIMMSAGELESGNA 199


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase large protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 474

Score = 253 bits (647), Expect = 6e-66
Identities = 130/197 (65%), Positives = 150/197 (76%), Gaps = 7/197 (3%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 263
+V +N P+ + ST P SAFFG SLKK A + + + F V A DE
Sbjct: 4 AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 264 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 443
KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSYDYIS G R +
Sbjct: 64 NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 444 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 623
++N DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 624 GINPIMMSAGELESGNA 674
GI PIMMSAGELESGNA
Sbjct: 183 GITPIMMSAGELESGNA 199


>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 476

Score = 253 bits (646), Expect = 8e-66
Identities = 133/194 (68%), Positives = 151/194 (77%), Gaps = 2/194 (1%)
Frame = +3

Query: 99 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASEDEGKQ 272
VG+V N P+ ST P SAFFG SLKK + S +S I+ F V A DE KQ
Sbjct: 8 VGAV-NTAPLALNGSGAGSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQ 66

Query: 273 TKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMD 452
T KDRW GL D SDDQQDITRGKGMVD+LFQ G GT + ++SSY+Y+SQG R +++D
Sbjct: 67 TDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLD 126

Query: 453 NMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGIN 632
N DGYYIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GIN
Sbjct: 127 NNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGIN 186

Query: 633 PIMMSAGELESGNA 674
PIMMSAGELESGNA
Sbjct: 187 PIMMSAGELESGNA 200


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 363

Score = 253 bits (646), Expect = 8e-66
Identities = 125/191 (65%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 281
+V + P++ + T P++ FFG LKKT+ + + A HF V A DEGKQT K
Sbjct: 12 TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 282 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 461
D+W GLA+D SDDQ DI RGKG VD+LFQ +G GT + VMS+YDYIS QR + DN
Sbjct: 72 DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 462 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 641
DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 642 MSAGELESGNA 674
MSAGELESG+A
Sbjct: 192 MSAGELESGDA 202


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 440

Score = 253 bits (646), Expect = 8e-66
Identities = 125/191 (65%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 281
+V + P++ + T P++ FFG LKKT+ + + A HF V A DEGKQT K
Sbjct: 12 TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 282 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 461
D+W GLA+D SDDQ DI RGKG VD+LFQ +G GT + VMS+YDYIS QR + DN
Sbjct: 72 DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 462 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 641
DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 642 MSAGELESGNA 674
MSAGELESG+A
Sbjct: 192 MSAGELESGDA 202


>tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 480

Score = 253 bits (646), Expect = 8e-66
Identities = 125/191 (65%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Frame = +3

Query: 105 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 281
+V + P++ + T P++ FFG LKKT+ + + A HF V A DEGKQT K
Sbjct: 12 TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 282 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 461
D+W GLA+D SDDQ DI RGKG VD+LFQ +G GT + VMS+YDYIS QR + DN
Sbjct: 72 DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 462 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 641
DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 642 MSAGELESGNA 674
MSAGELESG+A
Sbjct: 192 MSAGELESGDA 202