DK960939
Clone id TST39A01NGRL0008_M07
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_M07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTAGGGGATTCAGTCCCAGGAGTTGAACCACAGCGGGCGTCTCTGCTTTACCTTTACCGC
TAGCCAACTCCCCGGGTAAGCTTCGTAGGGTTACAATAGCCCTAGGAGTTTTCTGTTCGA
GCACTGCATAGAGATGGCATGGGCACGACCTTCTCCGACTCGAGCTGTCGCGCTTTTCAA
TTCTCCACAGGTAGGATGTTTTCTGGCACAACGGAATGTGTATGGCTCTTCTTCTTGCCG
CTGGAAATGTGTGCAGGCTATGGCTTTCTCTGCCAGGCAGAGTAGCTCATTCTCCAAACA
CAACAGTTGGATTGCCCTTTCCCTTTCCGGAGGAGTAGGAGGAGGAGGAAGGGGTCTGAA
GCAACGGTGCTTCTGCTCAACGAGTGGATCGCCACAACAGGCAGGAAGCAACCCATCAAA
TGCACCACATTCATATCAAGGCCAACAGGCCACTGGCAGCGGCTACATGGCACAACAGCA
ACAGAATATGCCTCCGCAACAGCCTGCGTACCCCTCTGCCAACAGCTCGCCGAACATTCA
ACAACCTCCACAAGTTGCTGCTGCTCCCAGAACTCAAAACACACATCAGCCCAATGCCTC
ATCTACTACCAGTCCTGCAGCAGGGGGGGGTGCACCTCCACCTCCTAGAACTAGTGCTGC
TGC
■■Homology search results ■■ -
sp_hit_id P19199
Definition sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mottle virus
Align length 80
Score (bit) 32.0
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960939|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_M07, 5'
(663 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot... 32 3.0
sp|O75023|LIRB5_HUMAN Leukocyte immunoglobulin-like receptor sub... 32 3.9
sp|Q8MJZ7|LIRB5_PANTR Leukocyte immunoglobulin-like receptor sub... 31 6.7

>sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mottle
virus PE=4 SV=2
Length = 1886

Score = 32.0 bits (71), Expect = 3.0
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Frame = -2

Query: 527 SCWQRGTQAVAE---------AYSVAVVPCSRC-QWPVGLDMNVVHLMGCFLPVVAIHSL 378
S W+R QA E A S + C C Q+ G+ + H + CF+ A H +
Sbjct: 990 SSWRRPIQATLEEINCHHNWTAISTGQLACRSCKQFLAGVQCHHCHAVYCFMCAEAYHDV 1049

Query: 377 SRSTVASDPFXXXXXLRKGK 318
+ S + +KGK
Sbjct: 1050 QAEKILSKDYSFSARGKKGK 1069


>sp|O75023|LIRB5_HUMAN Leukocyte immunoglobulin-like receptor
subfamily B member 5 OS=Homo sapiens GN=LILRB5 PE=1 SV=1
Length = 590

Score = 31.6 bits (70), Expect = 3.9
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3

Query: 310 PTVVFGE*ATLPGRESHSLHTFPAARRRAIHIPLCQKTSY 191
P V GE TL + H + TF + A H PLC K+ Y
Sbjct: 332 PKVASGENVTLLCQSWHQIDTFFLTKEGAAHPPLCLKSKY 371


>sp|Q8MJZ7|LIRB5_PANTR Leukocyte immunoglobulin-like receptor
subfamily B member 5 OS=Pan troglodytes GN=LILRB5 PE=2
SV=1
Length = 643

Score = 30.8 bits (68), Expect = 6.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3

Query: 310 PTVVFGE*ATLPGRESHSLHTFPAARRRAIHIPLCQKTSY 191
PTV GE TL + + TF + A H PLC K+ Y
Sbjct: 332 PTVASGENVTLLCQSWRQIDTFFLTKEGAAHPPLCLKSKY 371


tr_hit_id Q0J729
Definition tr|Q0J729|Q0J729_ORYSJ Os08g0238100 protein OS=Oryza sativa subsp. japonica
Align length 91
Score (bit) 36.6
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960939|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_M07, 5'
(663 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0J729|Q0J729_ORYSJ Os08g0238100 protein OS=Oryza sativa subs... 37 1.4
tr|Q53Q87|Q53Q87_ORYSJ Pentatricopeptide, putative, expressed OS... 35 3.2
tr|Q7RPV4|Q7RPV4_PLAYO Putative uncharacterized protein PY01351 ... 34 7.1

>tr|Q0J729|Q0J729_ORYSJ Os08g0238100 protein OS=Oryza sativa subsp.
japonica GN=Os08g0238100 PE=4 SV=1
Length = 631

Score = 36.6 bits (83), Expect = 1.4
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +2

Query: 140 WARPSPTRAVALFNSPQVGCFLAQRNVYGSSSCRWKCVQA---MAFSARQSSSFSKHNSW 310
W P P + L P+ GC L+ ++V+GS+ W + A + FSA QS S + ++W
Sbjct: 13 WGSPFPVQRARLI--PRCGCRLSSKHVWGSTGTPWHMLSALDRLLFSAPQSCSLA--HTW 68

Query: 311 IALSLSXXXXXXXXXLKQRCFCSTSGSPQQA 403
A + L + CF S S + A
Sbjct: 69 TASVM-------HNRLVRGCFSSFSAAAASA 92


>tr|Q53Q87|Q53Q87_ORYSJ Pentatricopeptide, putative, expressed
OS=Oryza sativa subsp. japonica GN=LOC_Os11g17530 PE=4
SV=1
Length = 609

Score = 35.4 bits (80), Expect = 3.2
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2

Query: 149 PSPTRAVALFNSPQVGCFLAQRNVYGSSSCRWKCVQA---MAFSARQSSSFSKHNSWIA 316
PSP RA + P+ GC L+ ++V+GS+ W + A + FSA QS S + ++W A
Sbjct: 18 PSPERARLI---PRCGCRLSSKHVWGSTGTPWHMLSALDCLLFSAPQSCSLA--HTWTA 71


>tr|Q7RPV4|Q7RPV4_PLAYO Putative uncharacterized protein PY01351
OS=Plasmodium yoelii yoelii GN=PY01351 PE=4 SV=1
Length = 1103

Score = 34.3 bits (77), Expect = 7.1
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2

Query: 248 ISSGKKKSHTHSVVPENILPVEN*KARQLESEKVVPMPSLCSARTEN 108
+SS KKK SV P N +N K ++L++E ++ +P+ + R N
Sbjct: 355 LSSSKKKKKNRSVAPNNKFNTDNNKNKELKNEHLLSIPNDLNVRKRN 401