DK960945 |
Clone id |
TST39A01NGRL0008_M14 |
Library |
TST39 |
Length |
637 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_M14. 5' end sequence. |
Accession |
DK960945 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL573Contig1 |
Sequence |
GCTCGATCGAGCTAGTCATCGCCATAGCTGTGCGTTCCATTCTCATCACGAGCATCTCTC CATGCGTGCCGCCACTGCAGGTCACTAGCTTTTCAGGTCTCTTGAGGGCGGCTGAGCTTG AATTTGTTCTCTGTGGAGCGCGTCACCACGGCTACCTTGCGATACACCTCCAAGCCCGAT ATGCCGGGGAAGCGCCCTCGCCCCTTTCTGCGAACGAGCAGTAGACCGCAGCTGCTCCAG AGCTGCGGTCATGAAAGCCCTCCTCCTCCCTCGCCAGTAGGCGTGAAGTATGACATGGGA GCTCCGCAGCGTGTCGTTGTTGGCTTTGATGTTAGTGGCGAAGCGAACAACACTAAGCCT CACTTCGACCCTTGTGAGAGCCCTAGGTCTGTGTTGGAATCGGATGCATTGAGTGATGAT GATGATCATCATCTTCGTAGTTCTCCCCCGGCCCCGACCCCAGCTCCATCTCCACGCTCT GTTCTTGATAGGTTGTTATCAGGACCGGATTCTCGACCTGCTTACACAGAAGGGGTTGGT CTAGGCATTGTTGCGGCCATCAGCCGAGATGAGCCGGCTGTGGCGGGTAAGGTGGTACTT GACAATTCTGTGGGGGGCAACCCTATTAGAGCTATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56WH4 |
Definition |
sp|Q56WH4|HDT2_ARATH Histone deacetylase HDT2 OS=Arabidopsis thaliana |
Align length |
67 |
Score (bit) |
35.4 |
E-value |
0.25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5AXG0 |
Definition |
tr|Q5AXG0|Q5AXG0_EMENI Predicted protein OS=Emericella nidulans |
Align length |
114 |
Score (bit) |
35.8 |
E-value |
0.65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960945|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_M14, 5' (637 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5AXG0|Q5AXG0_EMENI Predicted protein OS=Emericella nidulans ... 36 0.65 tr|Q3E700|Q3E700_ARATH Uncharacterized protein At5g22650.2 OS=Ar... 36 2.3 tr|Q5EY75|Q5EY75_ADE07 E2B hypothetical 12.6 kDa early protein O... 35 3.8 tr|Q2KSC4|Q2KSC4_9ADEN Hypothetical 12.6 kDa protein OS=Human ad... 35 3.8 tr|Q2KRX9|Q2KRX9_ADE16 Hypothetical 12.6 kDa early protein OS=Hu... 35 3.8 tr|A9U1I8|A9U1I8_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.8 tr|B7Z562|B7Z562_HUMAN cDNA FLJ59041 OS=Homo sapiens PE=2 SV=1 27 4.7 tr|B7FRG5|B7FRG5_PHATR Predicted protein OS=Phaeodactylum tricor... 35 5.0 tr|Q2KSK5|Q2KSK5_ADE03 Hypothetical 12.6 kDa protein OS=Human ad... 34 6.5 tr|Q3JGC1|Q3JGC1_BURP1 Acetyltransferase, GNAT family OS=Burkhol... 34 6.5 tr|B7CGK3|B7CGK3_BURPS Acetyltransferase, GNAT family OS=Burkhol... 34 6.5 tr|A8KQM5|A8KQM5_BURPS Acetyltransferase, GNAT family OS=Burkhol... 34 6.5 tr|Q2VNJ5|Q2VNJ5_METAI Chromosomal replication initiator protein... 34 8.6 tr|A3U0E3|A3U0E3_9RHOB Amidase OS=Oceanicola batsensis HTCC2597 ... 34 8.6 tr|B4JPI4|B4JPI4_DROGR GH13525 OS=Drosophila grimshawi GN=GH1352... 34 8.6 tr|B4JBE8|B4JBE8_DROGR GH11539 OS=Drosophila grimshawi GN=GH1153... 34 8.6 tr|Q2KG94|Q2KG94_MAGGR Putative uncharacterized protein OS=Magna... 34 8.6
>tr|Q5AXG0|Q5AXG0_EMENI Predicted protein OS=Emericella nidulans GN=AN7020.2 PE=4 SV=1 Length = 146
Score = 35.8 bits (81), Expect(2) = 0.65 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Frame = -2
Query: 423 IIITQCIRFQHRPRALTRVEVRLSVVRFAT--NIKANNDTLRSSHVILHAYWRGRRRAFM 250 I+I ++ Q A+ + +RL +V NI AN DT++ ++A+ AF Sbjct: 25 IMIIPIVQLQDVLCAMLSLSMRLGIVVCVDMGNISANGDTVQLIQKRINAFRLHDELAF- 83
Query: 249 TAALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHREQIQAQPPSRDLKS 88 +L L+ + R+ +GLG VSQ +R D LH +QP S+ L S Sbjct: 84 -GSLVHLQKKFKQAGTVRSNQILLGLG-VSQLARTDVLHCADADSQPQSKYLSS 135
Score = 20.8 bits (42), Expect(2) = 0.65 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -3
Query: 545 PRPTPSV*AGRESGPDNNL 489 P P P+ A RE PD+ + Sbjct: 7 PAPNPTARAKREMRPDSQI 25
>tr|Q3E700|Q3E700_ARATH Uncharacterized protein At5g22650.2 OS=Arabidopsis thaliana GN=At5g22650 PE=4 SV=2 Length = 305
Score = 35.8 bits (81), Expect = 2.3 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +1
Query: 169 SKPDMPGKRPRPFLRTSSRPQLLQSC--GHESPPPPSPVGVKYDMGAPQRVVVGFDVSGE 342 SK + GK+ +P +S PQ + GH + P P+ G K + A Q G SG Sbjct: 216 SKTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSSGG 275
Query: 343 ANNTKP 360 NN KP Sbjct: 276 NNNKKP 281
>tr|Q5EY75|Q5EY75_ADE07 E2B hypothetical 12.6 kDa early protein OS=Human adenovirus B serotype 7 GN=E2B PE=4 SV=1 Length = 114
Score = 35.0 bits (79), Expect = 3.8 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Frame = -2
Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSRDLK 91 AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR K Sbjct: 45 ALDTASKHARSNRATAAQKEKQGHGGSAQGARNPASHRHLHQRTRGDQVPSEPPSRPRK 103
>tr|Q2KSC4|Q2KSC4_9ADEN Hypothetical 12.6 kDa protein OS=Human adenovirus 21 PE=4 SV=1 Length = 114
Score = 35.0 bits (79), Expect = 3.8 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Frame = -2
Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSRDLK 91 AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR K Sbjct: 45 ALDTASKHARSNRATAAQKEKQGHGGSTQGARNPASHRHLHQRTRGDQVPSEPPSRPRK 103
>tr|Q2KRX9|Q2KRX9_ADE16 Hypothetical 12.6 kDa early protein OS=Human adenovirus B serotype 16 PE=4 SV=1 Length = 114
Score = 35.0 bits (79), Expect = 3.8 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Frame = -2
Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSRDLK 91 AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR K Sbjct: 45 ALDTASKHARSNRATAAQTEKQGHGGSAQGARNPASHRHLHQRTRGDQVPSEPPSRPRK 103
>tr|A9U1I8|A9U1I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_100368 PE=4 SV=1 Length = 421
Score = 35.0 bits (79), Expect = 3.8 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -1
Query: 529 LCKQVENPVLITTYQEQSVEMELGSGPGENYEDDDHHHHSMHPIPTQT*GSHKGRSE 359 +C+ E PVL+ + + + GPG NY+DD H S + T++ H+ S+ Sbjct: 189 MCQSDEGPVLLKVPKAPKSPISVNPGPGCNYDDDS-EHSSSSTVTTKSHEDHRDSSD 244
>tr|B7Z562|B7Z562_HUMAN cDNA FLJ59041 OS=Homo sapiens PE=2 SV=1 Length = 218
Score = 27.3 bits (59), Expect(2) = 4.7 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Frame = +1
Query: 172 KPDMPGKRPRPFLRTSSRPQLLQSCGHESP-PPPSPVGVKYDMGAPQRVVVGF 327 KP P K PRP RP L + P PPP P +G Q V F Sbjct: 32 KPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSPLGLAQSKVTLF 84
Score = 26.2 bits (56), Expect(2) = 4.7 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = +2
Query: 125 CSLWSASPRLPCDTPPSP 178 C LWS P LP PP P Sbjct: 19 CGLWSPPPPLPPRKPPRP 36
>tr|B7FRG5|B7FRG5_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_42487 PE=4 SV=1 Length = 199
Score = 34.7 bits (78), Expect = 5.0 Identities = 20/70 (28%), Positives = 28/70 (40%) Frame = -1
Query: 445 ENYEDDDHHHHSMHPIPTQT*GSHKGRSEA*CCSLRH*HQSQQRHAAELPCHTSRLLARE 266 + +++DDHHHH P T+ G H+ +H AE C +E Sbjct: 87 KKHKEDDHHHHDHKPHATKAHGEEH-------------HEHDHKHTAE--CTHDHAHQKE 131
Query: 265 EEGFHDRSSG 236 EE HD G Sbjct: 132 EEAKHDGHHG 141
>tr|Q2KSK5|Q2KSK5_ADE03 Hypothetical 12.6 kDa protein OS=Human adenovirus B serotype 3 GN=E2B PE=4 SV=1 Length = 111
Score = 34.3 bits (77), Expect = 6.5 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Frame = -2
Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSR 100 AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR Sbjct: 42 ALDTASKHARSNRATAAQKEKQGHGGSAQGARNPASHRHLHQRTRGDQVPSEPPSR 97
>tr|Q3JGC1|Q3JGC1_BURP1 Acetyltransferase, GNAT family OS=Burkholderia pseudomallei (strain 1710b) GN=BURPS1710b_A2231 PE=4 SV=1 Length = 213
Score = 34.3 bits (77), Expect = 6.5 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -2
Query: 261 RAFMTAALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHREQIQAQPPS 103 R F A+ LR AR A AL R G ++ R LHR + AQPP+ Sbjct: 80 RVFAQDAVRALRRVARVTSDAHALYRPAGFTALAHPPRWMELHRPGVYAQPPA 132
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