DK960945
Clone id TST39A01NGRL0008_M14
Library
Length 637
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_M14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCTCGATCGAGCTAGTCATCGCCATAGCTGTGCGTTCCATTCTCATCACGAGCATCTCTC
CATGCGTGCCGCCACTGCAGGTCACTAGCTTTTCAGGTCTCTTGAGGGCGGCTGAGCTTG
AATTTGTTCTCTGTGGAGCGCGTCACCACGGCTACCTTGCGATACACCTCCAAGCCCGAT
ATGCCGGGGAAGCGCCCTCGCCCCTTTCTGCGAACGAGCAGTAGACCGCAGCTGCTCCAG
AGCTGCGGTCATGAAAGCCCTCCTCCTCCCTCGCCAGTAGGCGTGAAGTATGACATGGGA
GCTCCGCAGCGTGTCGTTGTTGGCTTTGATGTTAGTGGCGAAGCGAACAACACTAAGCCT
CACTTCGACCCTTGTGAGAGCCCTAGGTCTGTGTTGGAATCGGATGCATTGAGTGATGAT
GATGATCATCATCTTCGTAGTTCTCCCCCGGCCCCGACCCCAGCTCCATCTCCACGCTCT
GTTCTTGATAGGTTGTTATCAGGACCGGATTCTCGACCTGCTTACACAGAAGGGGTTGGT
CTAGGCATTGTTGCGGCCATCAGCCGAGATGAGCCGGCTGTGGCGGGTAAGGTGGTACTT
GACAATTCTGTGGGGGGCAACCCTATTAGAGCTATCT
■■Homology search results ■■ -
sp_hit_id Q56WH4
Definition sp|Q56WH4|HDT2_ARATH Histone deacetylase HDT2 OS=Arabidopsis thaliana
Align length 67
Score (bit) 35.4
E-value 0.25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960945|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_M14, 5'
(637 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q56WH4|HDT2_ARATH Histone deacetylase HDT2 OS=Arabidopsis tha... 35 0.25
sp|P05670|Y126_ADE07 Uncharacterized 12.6 kDa early protein OS=H... 35 0.33
sp|P80073|MYB2_PHYPA Myb-related protein Pp2 OS=Physcomitrella p... 35 0.33
sp|O35141|RASF5_RAT Ras association domain-containing protein 5 ... 33 1.6
sp|Q5EBH1|RASF5_MOUSE Ras association domain-containing protein ... 33 1.6
sp|O42567|RXB_XENLA Retinal homeobox protein Rx-B OS=Xenopus lae... 32 2.1
sp|O42201|RXA_XENLA Retinal homeobox protein Rx-A OS=Xenopus lae... 32 2.8
sp|Q08AA9|NKD_ANOGA Protein naked cuticle homolog OS=Anopheles g... 32 2.8
sp|A6R7B8|MCA1_AJECN Metacaspase-1 OS=Ajellomyces capsulata (str... 31 4.7
sp|Q32LQ1|PKHO2_BOVIN Pleckstrin homology domain-containing fami... 30 8.1
sp|Q89893|DR2_HHV6U Uncharacterized protein DR2 OS=Human herpesv... 30 8.1

>sp|Q56WH4|HDT2_ARATH Histone deacetylase HDT2 OS=Arabidopsis
thaliana GN=HDT2 PE=2 SV=2
Length = 306

Score = 35.4 bits (80), Expect = 0.25
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1

Query: 169 SKPDMPGKRPRPFLRTSSRPQLLQSC---GHESPPPPSPVGVKYDMGAPQRVVVGFDVSG 339
SK + GK+ +P +S PQ + GH + P P+ G K + A Q G SG
Sbjct: 216 SKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSSG 275

Query: 340 EANNTKP 360
NN KP
Sbjct: 276 GNNNKKP 282


>sp|P05670|Y126_ADE07 Uncharacterized 12.6 kDa early protein
OS=Human adenovirus B serotype 7 PE=4 SV=1
Length = 114

Score = 35.0 bits (79), Expect = 0.33
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = -2

Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSRDLK 91
AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR K
Sbjct: 45 ALDTASKHARSNRATAAQKEKQGHGGSAQGARNPASHRHLHQRTRGDQVPSEPPSRPRK 103


>sp|P80073|MYB2_PHYPA Myb-related protein Pp2 OS=Physcomitrella
patens GN=PP2 PE=2 SV=1
Length = 421

Score = 35.0 bits (79), Expect = 0.33
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -1

Query: 529 LCKQVENPVLITTYQEQSVEMELGSGPGENYEDDDHHHHSMHPIPTQT*GSHKGRSE 359
+C+ E PVL+ + + + GPG NY+DD H S + T++ H+ S+
Sbjct: 189 MCQSDEGPVLLKVPKAPKSPISVNPGPGCNYDDDS-EHSSSSTVTTKSHEDHRDSSD 244


>sp|O35141|RASF5_RAT Ras association domain-containing protein 5
OS=Rattus norvegicus GN=Rassf5 PE=1 SV=1
Length = 413

Score = 32.7 bits (73), Expect = 1.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1

Query: 187 GKRPRPFLRTSSRPQLLQSCGHESPPPPS 273
G+RP P L P+ LQS G PPPP+
Sbjct: 7 GQRPYPLLLDPEPPRYLQSLGGTEPPPPA 35


>sp|Q5EBH1|RASF5_MOUSE Ras association domain-containing protein 5
OS=Mus musculus GN=Rassf5 PE=1 SV=1
Length = 413

Score = 32.7 bits (73), Expect = 1.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1

Query: 187 GKRPRPFLRTSSRPQLLQSCGHESPPPPS 273
G+RP P L P+ LQS G PPPP+
Sbjct: 7 GQRPYPLLLDPEPPRYLQSLGGTEPPPPA 35


>sp|O42567|RXB_XENLA Retinal homeobox protein Rx-B OS=Xenopus laevis
GN=rax-B PE=2 SV=1
Length = 325

Score = 32.3 bits (72), Expect = 2.1
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1

Query: 166 TSKPDMPGK-RPRPFLRTSSRPQLLQSCGHESPPPPSPVGVKY 291
T+ +PG P PF+ +S LQ G PPPP G Y
Sbjct: 246 TTPTSLPGSYTPPPFINPASMGHALQPLGAMGPPPPYQCGANY 288


>sp|O42201|RXA_XENLA Retinal homeobox protein Rx-A OS=Xenopus laevis
GN=rax-A PE=2 SV=1
Length = 322

Score = 32.0 bits (71), Expect = 2.8
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1

Query: 166 TSKPDMPGK-RPRPFLRTSSRPQLLQSCGHESPPPPSPVGVKY 291
T+ P +PG P PF+ S LQ G PPPP G +
Sbjct: 246 TTPPSLPGSYTPPPFINPVSVGHALQPLGAMGPPPPYQCGANF 288


>sp|Q08AA9|NKD_ANOGA Protein naked cuticle homolog OS=Anopheles
gambiae GN=nkd PE=2 SV=1
Length = 886

Score = 32.0 bits (71), Expect = 2.8
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Frame = -1

Query: 505 VLITTYQEQSVEME----LGSGPGE---NYEDDDHHHHS--MHPIPTQT*GSHKGRSEA* 353
+L+T+ +EQ ++++ GSG G+ +++ HHHH H P+ +H G S
Sbjct: 49 LLLTSDREQMLKVKSSASTGSGTGQTKTSFQHSHHHHHHGHHHQSPSSNGHNHSGTS--- 105

Query: 352 CCSLRH*HQSQQRH 311
H Q QQ+H
Sbjct: 106 -----HQQQQQQQH 114


>sp|A6R7B8|MCA1_AJECN Metacaspase-1 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=MCA1 PE=3 SV=1
Length = 356

Score = 31.2 bits (69), Expect = 4.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1

Query: 163 YTSKPDMPGKRPRPFLRTSSRPQLLQSCGHESPPPPSPVGVKYDMGAPQ 309
Y+ + P P+ + + S GH PPPP V++ GAPQ
Sbjct: 2 YSGRSGAPPPAHSPYPNSYNHGPPGHSAGHNVPPPPPTQPVQFGHGAPQ 50


>sp|Q32LQ1|PKHO2_BOVIN Pleckstrin homology domain-containing family
O member 2 OS=Bos taurus GN=PLEKHO2 PE=2 SV=1
Length = 499

Score = 30.4 bits (67), Expect = 8.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1

Query: 142 VTTATLRYTSKPDMPGKRPRPFLRTSSRPQLLQSCGHESPPPPSPVGVKYDMGAPQ 309
V A R T +P MP +P P TSS +++ +S P P P + G+ +
Sbjct: 191 VDAAQPRETPRPPMPPAKPSPAPETSSAGDRMETPVGQSAPAPVPASSEAHPGSQE 246


tr_hit_id Q5AXG0
Definition tr|Q5AXG0|Q5AXG0_EMENI Predicted protein OS=Emericella nidulans
Align length 114
Score (bit) 35.8
E-value 0.65
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960945|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_M14, 5'
(637 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5AXG0|Q5AXG0_EMENI Predicted protein OS=Emericella nidulans ... 36 0.65
tr|Q3E700|Q3E700_ARATH Uncharacterized protein At5g22650.2 OS=Ar... 36 2.3
tr|Q5EY75|Q5EY75_ADE07 E2B hypothetical 12.6 kDa early protein O... 35 3.8
tr|Q2KSC4|Q2KSC4_9ADEN Hypothetical 12.6 kDa protein OS=Human ad... 35 3.8
tr|Q2KRX9|Q2KRX9_ADE16 Hypothetical 12.6 kDa early protein OS=Hu... 35 3.8
tr|A9U1I8|A9U1I8_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.8
tr|B7Z562|B7Z562_HUMAN cDNA FLJ59041 OS=Homo sapiens PE=2 SV=1 27 4.7
tr|B7FRG5|B7FRG5_PHATR Predicted protein OS=Phaeodactylum tricor... 35 5.0
tr|Q2KSK5|Q2KSK5_ADE03 Hypothetical 12.6 kDa protein OS=Human ad... 34 6.5
tr|Q3JGC1|Q3JGC1_BURP1 Acetyltransferase, GNAT family OS=Burkhol... 34 6.5
tr|B7CGK3|B7CGK3_BURPS Acetyltransferase, GNAT family OS=Burkhol... 34 6.5
tr|A8KQM5|A8KQM5_BURPS Acetyltransferase, GNAT family OS=Burkhol... 34 6.5
tr|Q2VNJ5|Q2VNJ5_METAI Chromosomal replication initiator protein... 34 8.6
tr|A3U0E3|A3U0E3_9RHOB Amidase OS=Oceanicola batsensis HTCC2597 ... 34 8.6
tr|B4JPI4|B4JPI4_DROGR GH13525 OS=Drosophila grimshawi GN=GH1352... 34 8.6
tr|B4JBE8|B4JBE8_DROGR GH11539 OS=Drosophila grimshawi GN=GH1153... 34 8.6
tr|Q2KG94|Q2KG94_MAGGR Putative uncharacterized protein OS=Magna... 34 8.6

>tr|Q5AXG0|Q5AXG0_EMENI Predicted protein OS=Emericella nidulans
GN=AN7020.2 PE=4 SV=1
Length = 146

Score = 35.8 bits (81), Expect(2) = 0.65
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = -2

Query: 423 IIITQCIRFQHRPRALTRVEVRLSVVRFAT--NIKANNDTLRSSHVILHAYWRGRRRAFM 250
I+I ++ Q A+ + +RL +V NI AN DT++ ++A+ AF
Sbjct: 25 IMIIPIVQLQDVLCAMLSLSMRLGIVVCVDMGNISANGDTVQLIQKRINAFRLHDELAF- 83

Query: 249 TAALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHREQIQAQPPSRDLKS 88
+L L+ + R+ +GLG VSQ +R D LH +QP S+ L S
Sbjct: 84 -GSLVHLQKKFKQAGTVRSNQILLGLG-VSQLARTDVLHCADADSQPQSKYLSS 135



Score = 20.8 bits (42), Expect(2) = 0.65
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3

Query: 545 PRPTPSV*AGRESGPDNNL 489
P P P+ A RE PD+ +
Sbjct: 7 PAPNPTARAKREMRPDSQI 25


>tr|Q3E700|Q3E700_ARATH Uncharacterized protein At5g22650.2
OS=Arabidopsis thaliana GN=At5g22650 PE=4 SV=2
Length = 305

Score = 35.8 bits (81), Expect = 2.3
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1

Query: 169 SKPDMPGKRPRPFLRTSSRPQLLQSC--GHESPPPPSPVGVKYDMGAPQRVVVGFDVSGE 342
SK + GK+ +P +S PQ + GH + P P+ G K + A Q G SG
Sbjct: 216 SKTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSSGG 275

Query: 343 ANNTKP 360
NN KP
Sbjct: 276 NNNKKP 281


>tr|Q5EY75|Q5EY75_ADE07 E2B hypothetical 12.6 kDa early protein
OS=Human adenovirus B serotype 7 GN=E2B PE=4 SV=1
Length = 114

Score = 35.0 bits (79), Expect = 3.8
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = -2

Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSRDLK 91
AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR K
Sbjct: 45 ALDTASKHARSNRATAAQKEKQGHGGSAQGARNPASHRHLHQRTRGDQVPSEPPSRPRK 103


>tr|Q2KSC4|Q2KSC4_9ADEN Hypothetical 12.6 kDa protein OS=Human
adenovirus 21 PE=4 SV=1
Length = 114

Score = 35.0 bits (79), Expect = 3.8
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = -2

Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSRDLK 91
AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR K
Sbjct: 45 ALDTASKHARSNRATAAQKEKQGHGGSTQGARNPASHRHLHQRTRGDQVPSEPPSRPRK 103


>tr|Q2KRX9|Q2KRX9_ADE16 Hypothetical 12.6 kDa early protein OS=Human
adenovirus B serotype 16 PE=4 SV=1
Length = 114

Score = 35.0 bits (79), Expect = 3.8
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = -2

Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSRDLK 91
AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR K
Sbjct: 45 ALDTASKHARSNRATAAQTEKQGHGGSAQGARNPASHRHLHQRTRGDQVPSEPPSRPRK 103


>tr|A9U1I8|A9U1I8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_100368 PE=4 SV=1
Length = 421

Score = 35.0 bits (79), Expect = 3.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -1

Query: 529 LCKQVENPVLITTYQEQSVEMELGSGPGENYEDDDHHHHSMHPIPTQT*GSHKGRSE 359
+C+ E PVL+ + + + GPG NY+DD H S + T++ H+ S+
Sbjct: 189 MCQSDEGPVLLKVPKAPKSPISVNPGPGCNYDDDS-EHSSSSTVTTKSHEDHRDSSD 244


>tr|B7Z562|B7Z562_HUMAN cDNA FLJ59041 OS=Homo sapiens PE=2 SV=1
Length = 218

Score = 27.3 bits (59), Expect(2) = 4.7
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +1

Query: 172 KPDMPGKRPRPFLRTSSRPQLLQSCGHESP-PPPSPVGVKYDMGAPQRVVVGF 327
KP P K PRP RP L + P PPP P +G Q V F
Sbjct: 32 KPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSPLGLAQSKVTLF 84



Score = 26.2 bits (56), Expect(2) = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2

Query: 125 CSLWSASPRLPCDTPPSP 178
C LWS P LP PP P
Sbjct: 19 CGLWSPPPPLPPRKPPRP 36


>tr|B7FRG5|B7FRG5_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_42487 PE=4 SV=1
Length = 199

Score = 34.7 bits (78), Expect = 5.0
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -1

Query: 445 ENYEDDDHHHHSMHPIPTQT*GSHKGRSEA*CCSLRH*HQSQQRHAAELPCHTSRLLARE 266
+ +++DDHHHH P T+ G H+ +H AE C +E
Sbjct: 87 KKHKEDDHHHHDHKPHATKAHGEEH-------------HEHDHKHTAE--CTHDHAHQKE 131

Query: 265 EEGFHDRSSG 236
EE HD G
Sbjct: 132 EEAKHDGHHG 141


>tr|Q2KSK5|Q2KSK5_ADE03 Hypothetical 12.6 kDa protein OS=Human
adenovirus B serotype 3 GN=E2B PE=4 SV=1
Length = 111

Score = 34.3 bits (77), Expect = 6.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Frame = -2

Query: 243 ALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHR--------EQIQAQPPSR 100
AL+ ARS + A G GG +QG+R A HR +Q+ ++PPSR
Sbjct: 42 ALDTASKHARSNRATAAQKEKQGHGGSAQGARNPASHRHLHQRTRGDQVPSEPPSR 97


>tr|Q3JGC1|Q3JGC1_BURP1 Acetyltransferase, GNAT family
OS=Burkholderia pseudomallei (strain 1710b)
GN=BURPS1710b_A2231 PE=4 SV=1
Length = 213

Score = 34.3 bits (77), Expect = 6.5
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = -2

Query: 261 RAFMTAALEQLRSTARSQKGARALPRHIGLGGVSQGSRGDALHREQIQAQPPS 103
R F A+ LR AR A AL R G ++ R LHR + AQPP+
Sbjct: 80 RVFAQDAVRALRRVARVTSDAHALYRPAGFTALAHPPRWMELHRPGVYAQPPA 132