DK960953 |
Clone id |
TST39A01NGRL0008_M22 |
Library |
TST39 |
Length |
666 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_M22. 5' end sequence. |
Accession |
DK960953 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTATCATATTTTCTGTTATGTTATCCGGACTGATAAATTTCCGCTCTTCAGCAGTTAAAA TGCCATTAGATTAATAAGTCAGCTGAAGTAGCAGCGATGGCGGGCGCGAGCTTGCACGAG ACCTTCTTTTACGCCAGCTCCTGCAGCTGGAACCCGCTCTCTACTCGGATTCTTTCTCTA ACACCACCCAGAGCTGAAATCATCAGAAACTGCTTCTGCAAAGCCTTGTCTGCCACAAGA ACAAAGGACCCATTTCTCCTTAATGTTCAACATACAAAGAACCCATTTCTCTCCAGTACT CAGGTAGAAGGAAGGACAAGAAGAGTACCTCTCTTTCACACGTGTGCCACATCCTCGCAA GCCACAACCCTCTCTGATCCCGTGGTCCCCATCGCCCCTCAGGCAAGGACTCCCCCATTC CATGTCCTTATCACAGGCTCCACTAAAGGTATTGGCTATGCACTTGCGAGGAAATTTCTA CAAGAGGGTGACAAAGTTATCATTTGCTCACGGTCAGGTGAAAATGTGGACAAAGCAGTG GAAAACTTGACTCAGGAGTTTGGTGAGCAGCGAGCATATGGAATACCTGCTGATGTTAGA AATGGAGAGAGTGTCCAAAAACTGATAAGTTTTGCGAAAGAAAAGCTTGGTTACATTGAC GTATGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P07914 |
Definition |
sp|P07914|BAIA1_EUBSP Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) |
Align length |
79 |
Score (bit) |
56.6 |
E-value |
1.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84ST4 |
Definition |
tr|Q84ST4|Q84ST4_ORYSJ Putative oxidoreductase protein (Short-chain dehydrogenase/reductase NOL1) (Putative short chain dehydrogenase) (Having alternative splicing products) OS=Oryza sativa subsp. japonica |
Align length |
88 |
Score (bit) |
117.0 |
E-value |
5.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960953|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_M22, 5' (666 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q84ST4|Q84ST4_ORYSJ Putative oxidoreductase protein (Short-ch... 117 5e-25 tr|Q10FV1|Q10FV1_ORYSJ Myb-like DNA-binding domain, SHAQKYF clas... 117 5e-25 tr|Q0DPX6|Q0DPX6_ORYSJ Os03g0654600 protein OS=Oryza sativa subs... 117 5e-25 tr|B8ANJ7|B8ANJ7_ORYSI Putative uncharacterized protein OS=Oryza... 117 5e-25 tr|A3AKZ3|A3AKZ3_ORYSJ Putative uncharacterized protein OS=Oryza... 117 5e-25 tr|B6SH27|B6SH27_MAIZE Short-chain dehydrogenase/reductase SDR O... 115 2e-24 tr|A9NVY8|A9NVY8_PICSI Putative uncharacterized protein OS=Picea... 114 5e-24 tr|A7PN93|A7PN93_VITVI Chromosome chr1 scaffold_22, whole genome... 114 5e-24 tr|Q9FF83|Q9FF83_ARATH Arabidopsis thaliana genomic DNA, chromos... 107 9e-22 tr|Q8LEU3|Q8LEU3_ARATH Putative uncharacterized protein (Short-c... 107 9e-22 tr|A9TYK0|A9TYK0_PHYPA Predicted protein OS=Physcomitrella paten... 98 4e-19 tr|A8JEY8|A8JEY8_CHLRE Predicted protein OS=Chlamydomonas reinha... 91 8e-17 tr|A4RR83|A4RR83_OSTLU Predicted protein OS=Ostreococcus lucimar... 84 1e-14 tr|Q01GE2|Q01GE2_OSTTA Putative short chain dehydrogenase (ISS) ... 82 4e-14 tr|B4S7Z5|B4S7Z5_PROA2 Short-chain dehydrogenase/reductase SDR O... 81 5e-14 tr|B5M0Y6|B5M0Y6_TOBAC Putative chlorophyll b reductase OS=Nicot... 78 4e-13 tr|Q3ATL9|Q3ATL9_CHLCH Oxidoreductase, short-chain dehydrogenase... 78 6e-13 tr|Q93ZA0|Q93ZA0_ARATH AT4g13250/F17N18_140 (Short-chain dehydro... 77 7e-13 tr|B4S9R9|B4S9R9_PELPB Short-chain dehydrogenase/reductase SDR O... 76 2e-12 tr|Q0YQX6|Q0YQX6_9CHLB Short-chain dehydrogenase/reductase SDR O... 76 2e-12 tr|Q5N800|Q5N800_ORYSJ cDNA clone:J013155K17, full insert sequen... 75 3e-12 tr|B8AAZ1|B8AAZ1_ORYSI Putative uncharacterized protein OS=Oryza... 75 3e-12 tr|A9SP46|A9SP46_PHYPA Predicted protein (Fragment) OS=Physcomit... 74 1e-11 tr|A8ABB3|A8ABB3_IGNH4 Short-chain dehydrogenase/reductase SDR O... 71 5e-11 tr|A7PEP6|A7PEP6_VITVI Chromosome chr11 scaffold_13, whole genom... 71 7e-11 tr|A6ENU7|A6ENU7_9BACT Short chain dehydrogenase OS=unidentified... 70 1e-10 tr|Q0YS15|Q0YS15_9CHLB Short-chain dehydrogenase/reductase SDR O... 70 2e-10 tr|B6SSC2|B6SSC2_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1 70 2e-10 tr|Q8KDB1|Q8KDB1_CHLTE Oxidoreductase, short chain dehydrogenase... 69 3e-10 tr|B3EJA2|B3EJA2_CHLPB Short-chain dehydrogenase/reductase SDR O... 69 3e-10
>tr|Q84ST4|Q84ST4_ORYSJ Putative oxidoreductase protein (Short-chain dehydrogenase/reductase NOL1) (Putative short chain dehydrogenase) (Having alternative splicing products) OS=Oryza sativa subsp. japonica GN=NOL1 PE=2 SV=1 Length = 343
Score = 117 bits (294), Expect = 5e-25 Identities = 53/88 (60%), Positives = 70/88 (79%) Frame = +1
Query: 403 ARTPPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYG 582 A PP++VLITGSTKGIGYALA++FL+ GD V+ICSRS E V+ AV +L +EFGEQ +G Sbjct: 69 AMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWG 128
Query: 583 IPADVRNGESVQKLISFAKEKLGYIDVW 666 I DVR G+ V+ L+ FA++K+ YID+W Sbjct: 129 IVCDVREGKDVKALVDFARDKMKYIDIW 156
>tr|Q10FV1|Q10FV1_ORYSJ Myb-like DNA-binding domain, SHAQKYF class family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g45194 PE=4 SV=1 Length = 556
Score = 117 bits (294), Expect = 5e-25 Identities = 53/88 (60%), Positives = 70/88 (79%) Frame = +1
Query: 403 ARTPPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYG 582 A PP++VLITGSTKGIGYALA++FL+ GD V+ICSRS E V+ AV +L +EFGEQ +G Sbjct: 69 AMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWG 128
Query: 583 IPADVRNGESVQKLISFAKEKLGYIDVW 666 I DVR G+ V+ L+ FA++K+ YID+W Sbjct: 129 IVCDVREGKDVKALVDFARDKMKYIDIW 156
>tr|Q0DPX6|Q0DPX6_ORYSJ Os03g0654600 protein OS=Oryza sativa subsp. japonica GN=Os03g0654600 PE=3 SV=1 Length = 539
Score = 117 bits (294), Expect = 5e-25 Identities = 53/88 (60%), Positives = 70/88 (79%) Frame = +1
Query: 403 ARTPPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYG 582 A PP++VLITGSTKGIGYALA++FL+ GD V+ICSRS E V+ AV +L +EFGEQ +G Sbjct: 69 AMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWG 128
Query: 583 IPADVRNGESVQKLISFAKEKLGYIDVW 666 I DVR G+ V+ L+ FA++K+ YID+W Sbjct: 129 IVCDVREGKDVKALVDFARDKMKYIDIW 156
>tr|B8ANJ7|B8ANJ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12846 PE=4 SV=1 Length = 343
Score = 117 bits (294), Expect = 5e-25 Identities = 53/88 (60%), Positives = 70/88 (79%) Frame = +1
Query: 403 ARTPPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYG 582 A PP++VLITGSTKGIGYALA++FL+ GD V+ICSRS E V+ AV +L +EFGEQ +G Sbjct: 69 AMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWG 128
Query: 583 IPADVRNGESVQKLISFAKEKLGYIDVW 666 I DVR G+ V+ L+ FA++K+ YID+W Sbjct: 129 IVCDVREGKDVKALVDFARDKMKYIDIW 156
>tr|A3AKZ3|A3AKZ3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011465 PE=4 SV=1 Length = 500
Score = 117 bits (294), Expect = 5e-25 Identities = 53/88 (60%), Positives = 70/88 (79%) Frame = +1
Query: 403 ARTPPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYG 582 A PP++VLITGSTKGIGYALA++FL+ GD V+ICSRS E V+ AV +L +EFGEQ +G Sbjct: 69 AMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWG 128
Query: 583 IPADVRNGESVQKLISFAKEKLGYIDVW 666 I DVR G+ V+ L+ FA++K+ YID+W Sbjct: 129 IVCDVREGKDVKALVDFARDKMKYIDIW 156
>tr|B6SH27|B6SH27_MAIZE Short-chain dehydrogenase/reductase SDR OS=Zea mays PE=2 SV=1 Length = 341
Score = 115 bits (288), Expect = 2e-24 Identities = 52/85 (61%), Positives = 68/85 (80%) Frame = +1
Query: 412 PPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYGIPA 591 PP++VLITGSTKGIGYALARKFL+ GD VIICSRS + V+ V +L +E+GEQ +G Sbjct: 70 PPYNVLITGSTKGIGYALARKFLEAGDNVIICSRSAQKVESVVGDLKEEYGEQHVWGTVC 129
Query: 592 DVRNGESVQKLISFAKEKLGYIDVW 666 DVRNG+ V+ L+ FA++KL +ID+W Sbjct: 130 DVRNGKDVKALVEFARDKLKHIDIW 154
>tr|A9NVY8|A9NVY8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 373
Score = 114 bits (285), Expect = 5e-24 Identities = 52/85 (61%), Positives = 67/85 (78%) Frame = +1
Query: 412 PPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYGIPA 591 PPF+VLITGS+KGIGYALA++FL GD VIICSRS + V A+ENL EFG+QR +G Sbjct: 88 PPFNVLITGSSKGIGYALAKEFLSAGDNVIICSRSDDLVQAAIENLRGEFGDQRVWGTTC 147
Query: 592 DVRNGESVQKLISFAKEKLGYIDVW 666 DVR+GE+V+ L+ FAK + Y+D+W Sbjct: 148 DVRDGENVRALVDFAKNTIQYVDIW 172
>tr|A7PN93|A7PN93_VITVI Chromosome chr1 scaffold_22, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021145001 PE=3 SV=1 Length = 345
Score = 114 bits (285), Expect = 5e-24 Identities = 60/137 (43%), Positives = 87/137 (63%) Frame = +1
Query: 256 LLNVQHTKNPFLSSTQVEGRTRRVPLFHTCATSSQATTLSDPVVPIAPQARTPPFHVLIT 435 L ++ + FL+ + R + + S+QA+ S P++P P++VLIT Sbjct: 30 LFSLPFHSHAFLTFASPQKRLKPTAIPKNITPSAQASNDSAPMLP--------PYNVLIT 81
Query: 436 GSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYGIPADVRNGESV 615 GSTKGIG+ALAR+FL+ GD VII SRS E V+ +VE+L +EFG+ +G DVR GE V Sbjct: 82 GSTKGIGFALAREFLKAGDNVIISSRSAERVESSVESLRREFGKHHVWGTTCDVRKGEDV 141
Query: 616 QKLISFAKEKLGYIDVW 666 + L++FA+E L YID+W Sbjct: 142 KDLVAFAQENLKYIDIW 158
>tr|Q9FF83|Q9FF83_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUG13 OS=Arabidopsis thaliana PE=3 SV=1 Length = 341
Score = 107 bits (266), Expect = 9e-22 Identities = 48/86 (55%), Positives = 69/86 (80%) Frame = +1
Query: 409 TPPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYGIP 588 TPP+++LITGSTKGIGYALAR+FL+ GD V+ICSRS E V+ AV++L +EFGE +G Sbjct: 77 TPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGTK 135
Query: 589 ADVRNGESVQKLISFAKEKLGYIDVW 666 DV G+ V++L++++++ L YID+W Sbjct: 136 CDVTEGKDVRELVAYSQKNLKYIDIW 161
>tr|Q8LEU3|Q8LEU3_ARATH Putative uncharacterized protein (Short-chain dehydrogenase/reductase AtNOL1) (At5g04900) OS=Arabidopsis thaliana GN=AtNOL1 PE=2 SV=1 Length = 348
Score = 107 bits (266), Expect = 9e-22 Identities = 48/86 (55%), Positives = 69/86 (80%) Frame = +1
Query: 409 TPPFHVLITGSTKGIGYALARKFLQEGDKVIICSRSGENVDKAVENLTQEFGEQRAYGIP 588 TPP+++LITGSTKGIGYALAR+FL+ GD V+ICSRS E V+ AV++L +EFGE +G Sbjct: 77 TPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGTK 135
Query: 589 ADVRNGESVQKLISFAKEKLGYIDVW 666 DV G+ V++L++++++ L YID+W Sbjct: 136 CDVTEGKDVRELVAYSQKNLKYIDIW 161
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