DK960966
Clone id TST39A01NGRL0008_N11
Library
Length 707
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_N11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAACGACCAAGAAATCTAGGAAAATGACACACTCGTAGGAGGGTGGGTGCCAGTGGCACT
CTCGCATTACCCTCACGCAGACAAGAAGAGAGCTCGAGGCTCATCCATATTCGCTTCCCC
TGCTTCACCGACAAGGAGGCTCTCCCTCCCCCTCACTCTGCGCGAAGACCACCATTTCAG
CTCCGGTCTTCTTTTTTGTCTGACTAGCCATGTGTCTATGCCAAAATGGGAAGGACCTGG
AGTCATTGGATCACCATTTGATGAAAGAGAATTCAAGGTTTTAGTAGTATTTGAATCAGT
GGAAAGGCACATGCTTGCCTTAAAAGAGTTTCTGTTCGCTGCTTGTGAGCACGTCGCATG
CATGGGCACAGTGCTTGTTTTGGGAGCTGTAGCAAGTCCCCTGATGTACTCTCTGCTGCT
GAGCAACCGTCCAAGTTTCCTGATTCGCCAGTTAGACGTGTGAAGGAATTCTGGGGCTCA
AGCTCCAACGAAGGGGAGCTAACAAAGGAGTCCAAGTCATCCCAGAGGAGTCTTTCTTTT
AGCAAGCAAGATCAAAGTGCTGGAAGTTATGAGGCTAAGCTGAGTCCAAGCAGGGTTGAT
GGAAATCATGGTTTGGCTCTNTGGATGGAGCAAAGAAGAGAATGGACCAAAAAGACATCT
CAAGCAGTCGCAACCCAGACCCATGAACCTGTAATAAGCTGGTCATC
■■Homology search results ■■ -
sp_hit_id P40021
Definition sp|P40021|ZRG8_YEAST Zinc-regulated protein 8 OS=Saccharomyces cerevisiae
Align length 49
Score (bit) 30.4
E-value 9.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960966|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_N11, 5'
(707 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P40021|ZRG8_YEAST Zinc-regulated protein 8 OS=Saccharomyces c... 30 9.8
sp|A6ZQY2|ZRG8_YEAS7 Zinc-regulated protein 8 OS=Saccharomyces c... 30 9.8
sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sap... 30 9.8
sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B OS... 30 9.8

>sp|P40021|ZRG8_YEAST Zinc-regulated protein 8 OS=Saccharomyces
cerevisiae GN=ZRG8 PE=1 SV=1
Length = 1076

Score = 30.4 bits (67), Expect = 9.8
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1

Query: 512 DSFVSSPSLE--LEPQNSFTRLTGESGNLDGCSAAESTSGDLLQLPKQA 372
D++V SP+L + P NSFT+ T E N S + T + PK+A
Sbjct: 1028 DNYVISPNLPTTITPTNSFTKPTPEFSNDYSLSPIQETPSSVQSSPKRA 1076


>sp|A6ZQY2|ZRG8_YEAS7 Zinc-regulated protein 8 OS=Saccharomyces
cerevisiae (strain YJM789) GN=ZRG8 PE=2 SV=1
Length = 1076

Score = 30.4 bits (67), Expect = 9.8
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1

Query: 512 DSFVSSPSLE--LEPQNSFTRLTGESGNLDGCSAAESTSGDLLQLPKQA 372
D++V SP+L + P NSFT+ T E N S + T + PK+A
Sbjct: 1028 DNYVISPNLPTTITPTNSFTKPTPEFSNDYSLSPIQETPSSVQSSPKRA 1076


>sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens
GN=DENND4A PE=1 SV=2
Length = 1863

Score = 30.4 bits (67), Expect = 9.8
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Frame = -1

Query: 494 PSLELEPQNSFTRLTGESGNLDGCSAAES--TSGDLLQLP--------KQALCPCMRRAH 345
P L + +S RLTG S N G + ES ++ +LL + + C R+ H
Sbjct: 954 PKLSYQNSSSIVRLTGTSNNSAGKISGESMESTPELLLISSLEDTNETRNIQSRCFRKRH 1013

Query: 344 KQRTETLLRQ 315
K ET L+Q
Sbjct: 1014 KSDNETNLQQ 1023


>sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B
OS=Dictyostelium discoideum GN=gxcB PE=2 SV=1
Length = 1198

Score = 30.4 bits (67), Expect = 9.8
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = -2

Query: 511 TPLLAPLRWSLSPRIPSHV*LANQETWTVAQQQRVHQGTCYSSQNKHCAHACDVLTSSEQ 332
+PL++PL S SP + S +N T QQQ+ HQG S Q K +C LT +
Sbjct: 64 SPLISPLSSSPSPLLSSS---SNSIQSTSHQQQQQHQGVITSLQMK---PSCTSLTDDIE 117

Query: 331 K 329
K
Sbjct: 118 K 118


tr_hit_id O65047
Definition tr|O65047|O65047_PICMA Putative uncharacterized protein Sb07 OS=Picea mariana
Align length 123
Score (bit) 61.2
E-value 6.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960966|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_N11, 5'
(707 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|O65047|O65047_PICMA Putative uncharacterized protein Sb07 OS=... 61 6e-08
tr|A9NNV5|A9NNV5_PICSI Putative uncharacterized protein OS=Picea... 61 6e-08
tr|A9NZS2|A9NZS2_PICSI Putative uncharacterized protein OS=Picea... 50 1e-04
tr|Q942R8|Q942R8_ORYSJ cDNA clone:001-207-E01, full insert seque... 49 2e-04
tr|B8ADH6|B8ADH6_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04
tr|A2ZPS6|A2ZPS6_ORYSJ Putative uncharacterized protein OS=Oryza... 49 2e-04
tr|A9NZA2|A9NZA2_PICSI Putative uncharacterized protein OS=Picea... 49 4e-04
tr|A9RUT4|A9RUT4_PHYPA Predicted protein OS=Physcomitrella paten... 48 7e-04
tr|Q84JY4|Q84JY4_ARATH Putative uncharacterized protein At5g2536... 47 0.001
tr|A9PBG2|A9PBG2_POPTR Putative uncharacterized protein OS=Popul... 47 0.001
tr|A9TXX2|A9TXX2_PHYPA Predicted protein (Fragment) OS=Physcomit... 46 0.003
tr|B6U2Q4|B6U2Q4_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.005
tr|B6TFL2|B6TFL2_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.010
tr|A9TWV7|A9TWV7_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.051
tr|A1XM03|A1XM03_TOBAC Putative uncharacterized protein (Fragmen... 40 0.11
tr|B6TQN1|B6TQN1_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.15
tr|A9PGA0|A9PGA0_POPTR Putative uncharacterized protein OS=Popul... 40 0.19
tr|A9PDE9|A9PDE9_POPTR Putative uncharacterized protein OS=Popul... 40 0.19
tr|Q0E301|Q0E301_ORYSJ Os02g0201000 protein (Fragment) OS=Oryza ... 39 0.33
tr|B3H7L0|B3H7L0_ARATH Uncharacterized protein At4g32342.1 OS=Ar... 37 1.2
tr|Q9DUH8|Q9DUH8_9VIRU DNA, complete genome, isolate: s-TTV CH65... 37 1.6
tr|A7PHX2|A7PHX2_VITVI Chromosome chr13 scaffold_17, whole genom... 37 1.6
tr|A5AJZ7|A5AJZ7_VITVI Putative uncharacterized protein OS=Vitis... 37 1.6
tr|A2X247|A2X247_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.6
tr|Q0D6H2|Q0D6H2_ORYSJ Os07g0479600 protein OS=Oryza sativa subs... 36 2.8
tr|A5BLA9|A5BLA9_VITVI Putative uncharacterized protein OS=Vitis... 36 2.8
tr|A3BJQ8|A3BJQ8_ORYSJ Putative uncharacterized protein OS=Oryza... 36 2.8
tr|A2YL96|A2YL96_ORYSI Putative uncharacterized protein OS=Oryza... 36 2.8
tr|B6UF14|B6UF14_MAIZE Putative uncharacterized protein OS=Zea m... 35 4.7
tr|B6TZF9|B6TZF9_MAIZE Putative uncharacterized protein OS=Zea m... 35 4.7

>tr|O65047|O65047_PICMA Putative uncharacterized protein Sb07
OS=Picea mariana GN=Sb07 PE=2 SV=1
Length = 158

Score = 61.2 bits (147), Expect = 6e-08
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +1

Query: 358 MHGHSACFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXX 519
MHG+S C G C+K P + A ++PSK R +K +FW SS+NE +
Sbjct: 1 MHGNSGCLGGCAK-PTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMD-NSTVQS 58

Query: 520 XXXXXXXXXQDQSAGSYEAKLSPSRVDG-NHGLALWMEQRREWTKKTSQAVATQTHEPVI 696
+Q++ S A + + + NH L LW E R++W + A Q EPV+
Sbjct: 59 QRSVSSISASNQNSDSRAANTNANNTEFVNHALILWNEMRQQWVGDRPRNHARQLREPVL 118

Query: 697 SWS 705
SW+
Sbjct: 119 SWN 121


>tr|A9NNV5|A9NNV5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 158

Score = 61.2 bits (147), Expect = 6e-08
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +1

Query: 358 MHGHSACFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXX 519
MHG+S C G C+K P + A ++PSK R +K +FW SS+NE +
Sbjct: 1 MHGNSGCLGGCAK-PTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMD-NSTVQS 58

Query: 520 XXXXXXXXXQDQSAGSYEAKLSPSRVDG-NHGLALWMEQRREWTKKTSQAVATQTHEPVI 696
+Q++ S A + + + NH L LW E R++W + A Q EPV+
Sbjct: 59 QRSVSSISASNQNSDSRAANTNANNTEFVNHALILWNEMRQQWVGDRPRNHARQLREPVL 118

Query: 697 SWS 705
SW+
Sbjct: 119 SWN 121


>tr|A9NZS2|A9NZS2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 172

Score = 50.4 bits (119), Expect = 1e-04
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Frame = +1

Query: 376 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXXXXXXXX 537
C G C+K P + A ++PSK R +K +FW SS+NE +
Sbjct: 21 CLGGCAK-PTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMD-NSTVQSQRSVSS 78

Query: 538 XXXQDQSAGSYEAKLSPSRVDG-NHGLALWMEQRREWTKKTSQAVATQTHEPVISWS 705
+Q++ S A + + + NH L LW E R++W + Q EPV+SW+
Sbjct: 79 ISASNQNSDSRAANTNANNTEFVNHALILWNEMRQQWVGDRPRNHTRQLREPVLSWN 135


>tr|Q942R8|Q942R8_ORYSJ cDNA clone:001-207-E01, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0583G08.31 PE=2 SV=1
Length = 186

Score = 49.3 bits (116), Expect = 2e-04
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1

Query: 376 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKEFWGSSSNEGELTXXXXXXXXXXXXXXQDQ 555
CFG C K+ + + PD E W +++ E E + Q
Sbjct: 54 CFGCCDKAVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWAL-----------DQQ 102

Query: 556 SAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVAT-QTHEPVISWS 705
GS + P+ NHGL LW E R++WT KT Q T Q EP++SW+
Sbjct: 103 GVGSSQG---PTEFV-NHGLVLWKEIRKDWTAKTRQIPETKQIREPILSWN 149


>tr|B8ADH6|B8ADH6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00587 PE=4 SV=1
Length = 184

Score = 49.3 bits (116), Expect = 2e-04
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1

Query: 376 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKEFWGSSSNEGELTXXXXXXXXXXXXXXQDQ 555
CFG C K+ + + PD E W +++ E E + Q
Sbjct: 52 CFGCCDKAVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWAL-----------DQQ 100

Query: 556 SAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVAT-QTHEPVISWS 705
GS + P+ NHGL LW E R++WT KT Q T Q EP++SW+
Sbjct: 101 GVGSSQG---PTEFV-NHGLVLWKEIRKDWTAKTRQIPETKQIREPILSWN 147


>tr|A2ZPS6|A2ZPS6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_000548 PE=4 SV=1
Length = 189

Score = 49.3 bits (116), Expect = 2e-04
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1

Query: 376 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKEFWGSSSNEGELTXXXXXXXXXXXXXXQDQ 555
CFG C K+ + + PD E W +++ E E + Q
Sbjct: 57 CFGCCDKAVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWAL-----------DQQ 105

Query: 556 SAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVAT-QTHEPVISWS 705
GS + P+ NHGL LW E R++WT KT Q T Q EP++SW+
Sbjct: 106 GVGSSQG---PTEFV-NHGLVLWKEIRKDWTAKTRQIPETKQIREPILSWN 152


>tr|A9NZA2|A9NZA2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 212

Score = 48.5 bits (114), Expect = 4e-04
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Frame = +1

Query: 319 LKRVSVRCL*ARRMHGHSACFGSCSKSPDVL----SAAEQPSKFPDSPVRRVKEFWGSSS 486
L VS C+ C G C+K P S+ PS+ S + +K+ W SSS
Sbjct: 48 LSSVSCACM--------GGCVGGCAKPPPATTVERSSRRHPSRRGVSGLFLLKKDWWSSS 99

Query: 487 NEGELTXXXXXXXXXXXXXXQDQSAGSYEAKLSPSRVDG----NHGLALWMEQRREWTKK 654
E ++ ++ + E +L+ + NH L +W E+RREW
Sbjct: 100 PE-DMENNVSNSHSMRRNPSVGSTSQAEETQLTNDSTNSTTFVNHALIMWNERRREWLGN 158

Query: 655 TSQAVATQTHEPVISWS 705
SQ EP+ISW+
Sbjct: 159 RSQNQPQMPREPIISWN 175


>tr|A9RUT4|A9RUT4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_178307 PE=4 SV=1
Length = 174

Score = 47.8 bits (112), Expect = 7e-04
Identities = 42/140 (30%), Positives = 58/140 (41%), Gaps = 11/140 (7%)
Frame = +1

Query: 319 LKRVSVRCL*ARRMHGHSACFGSCSKSP--DVLSAAEQPSKFPDSPVRRVKEFWGSSSNE 492
L ++S+ C+ R M+G CFG +KS D+ S + V F SSSNE
Sbjct: 7 LIKLSLLCV--RCMYGCGNCFGRFTKSQKLDLGSTKDSLGADKGETVPLNNSFETSSSNE 64

Query: 493 GELTXXXXXXXXXXXXXXQDQSAGSYEAKLSPSRVDG---------NHGLALWMEQRREW 645
E + S+ S +S +R NH L +W E+RREW
Sbjct: 65 ME-------NNGISAHHLRPSSSISANHHISETRASAENDANSPFVNHALKMWTERRREW 117

Query: 646 TKKTSQAVATQTHEPVISWS 705
+ + Q EPVISWS
Sbjct: 118 LRNRERPRPAQHREPVISWS 137


>tr|Q84JY4|Q84JY4_ARATH Putative uncharacterized protein At5g25360
OS=Arabidopsis thaliana GN=At5g25360 PE=2 SV=1
Length = 169

Score = 47.4 bits (111), Expect = 0.001
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Frame = +1

Query: 376 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVK------EFWGSSSNEGELTXXXXXXXXXXX 537
CFG C+K P ++ A ++PSK R VK +FW +S+ E + +
Sbjct: 21 CFGCCNKPP-LIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query: 538 XXXQDQSAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVATQTHEPVISWS 705
+ S A S NHGL LW + R++W + + EP ISW+
Sbjct: 80 SFTNNTSTS---ASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKVREPTISWN 132


>tr|A9PBG2|A9PBG2_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 172

Score = 47.0 bits (110), Expect = 0.001
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Frame = +1

Query: 376 CFGSCSKSPDVLSAAEQPSKFPDSPVRRVKE------FWGSSSNEGELTXXXXXXXXXXX 537
CFG C+K P ++ A + SK R VK+ FW +S+ + E +
Sbjct: 21 CFGCCAKPPTII-AIDASSKGLRVQKRSVKKSSKSNNFWSTSAGDMENSTMHSQGSLSSI 79

Query: 538 XXXQDQSAGSYEAKLSPSRVDGNHGLALWMEQRREWTKKTSQAVATQTHEPVISWS 705
Q S S S N GL LW + R++W Q EP ISW+
Sbjct: 80 STLNQQLDPSNAGSTSNSSEFVNRGLLLWNQTRQQWLGNKKTQNRKQVREPTISWN 135