DK960970
Clone id TST39A01NGRL0008_N16
Library
Length 609
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_N16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAATCCTGCAGGCTTCTTTTTCCTTTGAATTAGGGCTTTTGCC
TCCCTGCACTTCAGTGAACACCAAGGTGGATCTTTTTTTCTGATTGCATCTCCCAGGCAT
GGTGAGACGACTCGATGTCTAACGGCAGACAAGAACCATTGATGCCGAGCTTTGTCGGCC
GCGGAATGCAGAGCTTCCTTCAGCCATCGTTAAATATCGCAGATCCGAATTGTGCAGATA
TTGGTGGCGACATTGGTAAAATCAATCAGCCAGTCAATGTAGGGTTGGCTGAAGGAATAG
GTTTCTTTGATAAAGGGTTTTTCCCAACAAATTACACAGGCACTTCTAGTGCACTTCCTA
TTATTCCCTTTCAGTACAACCCTCGGCAAGAGGACAATCGGCGAGCCTCGCAATCAAGCT
CCTTATCTGAAGCCAGCTCAGAGTCAGAATCTGAACAAAATAGACCTTCCAATCCTAATA
AAAAAGATGGGCTTTGAATCACCTCCTGGAAGACCCTTCCAAAGCTGGCCCGACCATAGT
CCTCGAGCA
■■Homology search results ■■ -
sp_hit_id Q8BWT5
Definition sp|Q8BWT5|DIP2A_MOUSE Disco-interacting protein 2 homolog A OS=Mus musculus
Align length 52
Score (bit) 30.8
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960970|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_N16, 5'
(609 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BWT5|DIP2A_MOUSE Disco-interacting protein 2 homolog A OS=M... 31 5.6
sp|Q14689|DIP2A_HUMAN Disco-interacting protein 2 homolog A OS=H... 30 7.4

>sp|Q8BWT5|DIP2A_MOUSE Disco-interacting protein 2 homolog A OS=Mus
musculus GN=Dip2a PE=2 SV=2
Length = 1523

Score = 30.8 bits (68), Expect = 5.6
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2

Query: 434 LKGNNRKCTRSACVICWEKPFIKETYSFSQPYIDWLIDFTNVATNI-CTIRI 282
+KG N C R+ V+ E+P I T SFS+ + D + V+T C + +
Sbjct: 1219 MKGVNLSCVRTCMVVAEERPRISLTQSFSKLFKDLGLPARAVSTTFGCRVNV 1270


>sp|Q14689|DIP2A_HUMAN Disco-interacting protein 2 homolog A OS=Homo
sapiens GN=DIP2A PE=2 SV=2
Length = 1571

Score = 30.4 bits (67), Expect = 7.4
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2

Query: 434 LKGNNRKCTRSACVICWEKPFIKETYSFSQPYIDWLIDFTNVATNI-CTIRI 282
+KG N C R+ V+ E+P I T SFS+ + D + V+T C + +
Sbjct: 1267 MKGVNLSCVRTCMVVAEERPRIALTQSFSKLFKDLGLPARAVSTTFGCRVNV 1318


tr_hit_id A9WJK1
Definition tr|A9WJK1|A9WJK1_CHLAA Putative uncharacterized protein OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Align length 98
Score (bit) 34.3
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960970|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_N16, 5'
(609 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9WJK1|A9WJK1_CHLAA Putative uncharacterized protein OS=Chlor... 34 5.8
tr|B2QSK4|B2QSK4_9CHLR Putative uncharacterized protein OS=Chlor... 34 5.8
tr|B8PDP6|B8PDP6_9APHY Predicted protein OS=Postia placenta Mad-... 33 9.8

>tr|A9WJK1|A9WJK1_CHLAA Putative uncharacterized protein
OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635
/ J-10-fl) GN=Caur_2700 PE=4 SV=1
Length = 1165

Score = 34.3 bits (77), Expect = 5.8
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -2

Query: 428 GNNRKCTRSACVICWEKPFIKETYSFSQPYIDWLIDF--TNVATNICTIRICDI*RWLKE 255
G +R RS+ + W+ F+K +F + I + D+ NV ++ T + W+ E
Sbjct: 656 GVDRLSDRSSSICSWDTGFVKIRNTFGRQAIPMMWDYAEANVFSD-STGNFSALLEWVVE 714

Query: 254 ALHSAADKARHQWFLSAVRHRVVSPCLGDAIRKKDPPW 141
LH A KA Q F + ++ +S + I DPP+
Sbjct: 715 FLHVAPAKALGQAFQADAANQTIST---NKIISTDPPY 749


>tr|B2QSK4|B2QSK4_9CHLR Putative uncharacterized protein
OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_3987 PE=4
SV=1
Length = 1165

Score = 34.3 bits (77), Expect = 5.8
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -2

Query: 428 GNNRKCTRSACVICWEKPFIKETYSFSQPYIDWLIDF--TNVATNICTIRICDI*RWLKE 255
G +R RS+ + W+ F+K +F + I + D+ NV ++ T + W+ E
Sbjct: 656 GVDRLSDRSSSICSWDTGFVKIRNTFGRQAIPMMWDYAEANVFSD-STGNFSALLEWVVE 714

Query: 254 ALHSAADKARHQWFLSAVRHRVVSPCLGDAIRKKDPPW 141
LH A KA Q F + ++ +S + I DPP+
Sbjct: 715 FLHVAPAKALGQAFQADAANQTIST---NKIISTDPPY 749


>tr|B8PDP6|B8PDP6_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_97523 PE=4 SV=1
Length = 618

Score = 33.5 bits (75), Expect = 9.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -2

Query: 380 KPFIKETYSFSQPYIDWLIDFT 315
K +++ Y F+ PY+DW+I++T
Sbjct: 235 KSYVRSVYDFAAPYVDWMIEYT 256