DK960976 |
Clone id |
TST39A01NGRL0008_N23 |
Library |
TST39 |
Length |
587 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_N23. 5' end sequence. |
Accession |
DK960976 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL151Contig1 |
Sequence |
CGTTTGTTCTTATTGCTGCTGCTGCTAACGAGCACTCCATCCAGCAGAGAAGATGGCGGA AGCAGTGCCCCTCCCTTCCGGTCAGCCTGAAGTGAAGCTCCTTGGCCGCTGGACCTTCGA TGACGTCGAGATCAATGACATCTCGCTGGCTGACTATATCGCTGTCTCGGTGCACAAACA TGCCACCTTTGTGCCTCATACCGCTGGGAGATATTCGGTGAAACGTTTCAGAAAGGCCCA GTGCCCCATTGTGGAGAGATTGACCAACTCTCTCATGATGCATGGCCGAAACAATGGAAA GAAGCTAATGGCAGTGCGGATTGTTAAGCACGCCATGGAGATTATTCACTTGTTGACTGA TCAAAATCCAATTCAAGTTATTGTTGATGCAGTTATCAACAGTGGTCCTCGGGAGGATGC CACTCGTATTGGATCGGCTGGTGTTGTTAGAAGACAGGCTGTCGATATCTCTCCTCTTAG GAGAGTAAACCAGGCTATCTATCTCCTCACTACTGGTGCTCGAGAGAGTGCTTTCAGAAA TATCAAGACTATAGCGGAGTGCCTTGCTGATGAGCTGATCAATGCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65731 |
Definition |
sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum |
Align length |
168 |
Score (bit) |
302.0 |
E-value |
9.0e-82 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RHY5 |
Definition |
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
168 |
Score (bit) |
324.0 |
E-value |
3.0e-87 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960976|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_N23, 5' (587 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella paten... 324 3e-87 tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea... 317 4e-85 tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 305 9e-82 tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expre... 304 2e-81 tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza... 304 2e-81 tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome... 303 4e-81 tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome... 302 8e-81 tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Popul... 299 9e-80 tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert seque... 298 2e-79 tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza... 298 2e-79 tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 295 1e-78 tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea m... 295 1e-78 tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 295 2e-78 tr|B3TLU9|B3TLU9_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 295 2e-78 tr|B7FMH6|B7FMH6_MEDTR Putative uncharacterized protein (Fragmen... 293 5e-78 tr|A4RZJ5|A4RZJ5_OSTLU Ribosomal protein S5, component of cytoso... 293 5e-78 tr|B6UGL6|B6UGL6_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 293 6e-78 tr|B7FGS4|B7FGS4_MEDTR Putative uncharacterized protein OS=Medic... 292 1e-77 tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annu... 291 2e-77 tr|A8J2I5|A8J2I5_CHLRE Ribosomal protein S5 OS=Chlamydomonas rei... 286 6e-76 tr|Q7SYU3|Q7SYU3_XENLA MGC64490 protein OS=Xenopus laevis GN=rps... 280 4e-74 tr|Q0P475|Q0P475_DANRE Zgc:153322 OS=Danio rerio GN=zgc:153322 P... 278 1e-73 tr|Q28EJ8|Q28EJ8_XENTR Ribosomal protein S5 OS=Xenopus tropicali... 277 3e-73 tr|Q90YR9|Q90YR9_ICTPU 40S ribosomal protein S5 OS=Ictalurus pun... 276 8e-73 tr|Q6Y214|Q6Y214_PAGMA 40S ribosomal protein S5 (Fragment) OS=Pa... 276 8e-73 tr|A2Q0S0|A2Q0S0_SOLSE Ribosomal protein S5 OS=Solea senegalensi... 276 8e-73 tr|Q91V55|Q91V55_MOUSE Putative uncharacterized protein OS=Mus m... 276 8e-73 tr|B0BN81|B0BN81_RAT Rps5 protein (Ribosomal protein S5, isoform... 276 8e-73 tr|Q4KTD7|Q4KTD7_SUBDO S5 OS=Suberites domuncula PE=2 SV=1 276 8e-73 tr|Q53G25|Q53G25_HUMAN Ribosomal protein S5 variant (Fragment) O... 276 8e-73
>tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106946 PE=3 SV=1 Length = 196
Score = 324 bits (830), Expect = 3e-87 Identities = 162/168 (96%), Positives = 166/168 (98%) Frame = +2
Query: 83 QPEVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 262 QPEVKL GRW+FDD+EINDISLADYIAVSV KHATFVPHTAGRYSVKRFRKAQCPIVERL Sbjct: 5 QPEVKLFGRWSFDDIEINDISLADYIAVSVDKHATFVPHTAGRYSVKRFRKAQCPIVERL 64
Query: 263 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 442 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDATRIGSAG Sbjct: 65 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDATRIGSAG 124
Query: 443 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 V+RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 125 VIRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 172
>tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 198
Score = 317 bits (811), Expect = 4e-85 Identities = 161/175 (92%), Positives = 166/175 (94%) Frame = +2
Query: 62 AVPLPSGQPEVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQ 241 A LP QPEVKL RWTF+DVE+ND+SLADYIAV KHATFVPHTAGRYSVKRFRKAQ Sbjct: 2 AATLP--QPEVKLFNRWTFEDVEVNDLSLADYIAVQSQKHATFVPHTAGRYSVKRFRKAQ 59
Query: 242 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDA 421 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDA Sbjct: 60 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDA 119
Query: 422 TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 TRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGARESAFRNIKTIAECLADELINA Sbjct: 120 TRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGARESAFRNIKTIAECLADELINA 174
>tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 195
Score = 305 bits (782), Expect = 9e-82 Identities = 153/168 (91%), Positives = 162/168 (96%) Frame = +2
Query: 83 QPEVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 262 Q EVKL RW+F++VE++DISLADYIAVS KHAT++PHTAGRY+VKRFRKAQCPIVERL Sbjct: 4 QQEVKLFNRWSFEEVEVSDISLADYIAVSPAKHATYLPHTAGRYAVKRFRKAQCPIVERL 63
Query: 263 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 442 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 64 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 123
Query: 443 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 124 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 171
>tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0482000 PE=2 SV=1 Length = 199
Score = 304 bits (779), Expect = 2e-81 Identities = 156/178 (87%), Positives = 166/178 (93%) Frame = +2
Query: 53 MAEAVPLPSGQPEVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 232 MAE V LP Q EVKL RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 233 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 412 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 413 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 175
>tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36106 PE=3 SV=1 Length = 199
Score = 304 bits (779), Expect = 2e-81 Identities = 156/178 (87%), Positives = 166/178 (93%) Frame = +2
Query: 53 MAEAVPLPSGQPEVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 232 MAE V LP Q EVKL RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 233 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 412 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 413 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 175
>tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026702001 PE=3 SV=1 Length = 204
Score = 303 bits (777), Expect = 4e-81 Identities = 152/166 (91%), Positives = 160/166 (96%) Frame = +2
Query: 89 EVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 268 EVKL RW+FD+V+I D+SL DY+AV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTN Sbjct: 15 EVKLFNRWSFDEVQIGDMSLLDYVAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 74
Query: 269 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 448 SLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV Sbjct: 75 SLMMHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 134
Query: 449 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 135 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 180
>tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025458001 PE=3 SV=1 Length = 208
Score = 302 bits (774), Expect = 8e-81 Identities = 151/165 (91%), Positives = 160/165 (96%) Frame = +2
Query: 92 VKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTNS 271 VKL RW+FD+V+I+DISL DYIAV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTNS Sbjct: 20 VKLFNRWSFDEVQISDISLEDYIAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 79
Query: 272 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 451 LMMHGRNNGKKLMAVRI+KHAMEIIHLLT+QNPIQVIVDAVINSGPREDATRIGSAGVVR Sbjct: 80 LMMHGRNNGKKLMAVRIIKHAMEIIHLLTEQNPIQVIVDAVINSGPREDATRIGSAGVVR 139
Query: 452 RQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 RQAVDISPLRR+NQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 140 RQAVDISPLRRINQAIYLLTTGARESAFRNIKTIAECLADELINA 184
>tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 207
Score = 299 bits (765), Expect = 9e-80 Identities = 154/184 (83%), Positives = 163/184 (88%), Gaps = 6/184 (3%) Frame = +2
Query: 53 MAEAVPLPSGQP------EVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRY 214 MAEAV P +VKL RW+FDD+ +NDISLADY+ V V KHAT+VPHTAGRY Sbjct: 1 MAEAVVAPPNPEANQAIYDVKLFNRWSFDDINVNDISLADYVGVQV-KHATYVPHTAGRY 59
Query: 215 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAV 394 SVKRFRKAQCPIVERLTNSL MHGRNNGKKL AV IVKHAMEIIHLLTDQNPIQVIVDAV Sbjct: 60 SVKRFRKAQCPIVERLTNSLQMHGRNNGKKLKAVTIVKHAMEIIHLLTDQNPIQVIVDAV 119
Query: 395 INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADE 574 +NSGPREDATRIGSAGVVRRQAVDISPLRRVNQA+YLLTTGARE+AFRNIKTIAECLADE Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGAREAAFRNIKTIAECLADE 179
Query: 575 LINA 586 LINA Sbjct: 180 LINA 183
>tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0672D08.6 PE=2 SV=1 Length = 200
Score = 298 bits (762), Expect = 2e-79 Identities = 148/168 (88%), Positives = 158/168 (94%) Frame = +2
Query: 83 QPEVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 262 Q VKL W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 263 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 442 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 443 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 176
>tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00008 PE=3 SV=1 Length = 200
Score = 298 bits (762), Expect = 2e-79 Identities = 148/168 (88%), Positives = 158/168 (94%) Frame = +2
Query: 83 QPEVKLLGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 262 Q VKL W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 263 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 442 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 443 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 586 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINA 176
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